RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Atg16l1Q8C0J2 607 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tmed2Q9R0Q3 201 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Trpm2Q91YD4 1506 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Grin2dQ03391 1323 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 CpQ61147 1061 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Grtp1Q9D3N8 359 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cyp3a25O09158 503 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 GmipQ6PGG2 971 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zc3h6Q8BYK8 1177 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Fgd4Q91ZT5 766 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Fgfr1op2Q9CRA9 253 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ddx24Q9ESV0 857 aaKnown RBP10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Magi2Q9WVQ1 1275 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Apol6B7ZC55 329 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Atp11aP98197 1187 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Mapk6Q61532 720 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Usp17leQ7M764 540 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ankrd49Q8VE42 238 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tmem192Q9CXT7 266 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Arhgef11Q68FM7 1552 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Akap5D3YVF0 745 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Stxbp3Q60770 592 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pja2Q80U04 707 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Plcb4Q91UZ1 1175 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Hnrnph1O35737 449 aaKnown RBP10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pde6aP27664 859 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 AdalQ80SY6 360 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Eid1Q9DCR4 169 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 IdeQ9JHR7 1019 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Wdr19Q3UGF1 1341 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gm4340L7N2C4 268 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tpp1O89023 562 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cracr2bQ80ZJ8 394 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Slc4a8Q8JZR6 1089 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Nek3Q9R0A5 511 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rsbn1lD3Z0K6 821 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tdo2P48776 406 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tmed8Q3UHI4 326 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Vav2Q60992 868 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Impg2Q80XH2 1243 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tlcd1Q99JT6 247 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rgs22G3UYX5 1258 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pcdha4O88689 947 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Foxp2P58463 714 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gjb6P70689 261 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Srgap2Q91Z67 1071 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cnpy3Q9DAU1 276 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dot1lQ6XZL8 1540 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Idh1O88844 414 aaKnown RBP10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Arl1P61211 181 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tc2nQ91XT6 489 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gpaa1Q9WTK3 621 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Col1a2Q01149 1372 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rad51bO35719 350 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Nck2O55033 380 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 StrnO55106 780 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 FosP01101 380 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pnma5Q5DTT8 618 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pcdhb14Q6PB90 796 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ubxn10Q8BG34 277 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Klhl38Q8BSF5 581 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Def8Q99J78 448 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cul3Q9JLV5 768 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Serpinb6cW4VSP4 379 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dennd4bQ3U1Y4 1499 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Adgrl1Q80TR1 1466 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gm382B1AXN3 1250 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gm1758F6VZZ1 202 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Jade1Q6ZPI0 834 aaKnown RBP10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Stambpl1Q76N33 436 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cfap36Q8C6E0 343 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Creb3l3Q91XE9 479 aa10.98□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cyp3a57D3YYZ0 503 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zfp839E9PUU5 921 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Timm44O35857 452 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 D1Pas1P16381 660 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Glg1Q61543 1175 aaKnown RBP10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Q8C5C9 218 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ttc4Q8R3H9 386 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ginm1Q91WR6 327 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pcdhb2Q91Y00 799 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Setd1aE9PYH6 1716 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tnip3A0A1D5RMN0 279 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Mapkapk5O54992 473 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 YwhagP61982 247 aaKnown RBP10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 PhexP70669 749 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gbp10Q000W5 611 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Nlrx1Q3TL44 975 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Serpinb6dQ3UWK8 375 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Kif22Q3V300 660 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Trim59Q922Y2 403 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pstpip2Q99M15 334 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rgs3Q9DC04 966 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Mroh7A2AVR2 1279 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 MycnP03966 462 aaKnown RBP10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 C87499Q3UX49 493 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Spag6Q3V0U9 509 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zrsr1Q64707 428 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Bud13Q8R149 637 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 PawrQ925B0 333 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms