Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Gm25239-201ENSMUST00000174915 86 ntBASIC43.35■■■■■ 4.53
StrnO55106 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
StrnO55106 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
StrnO55106 Gm15042-201ENSMUST00000120212 883 ntBASIC37.71■■■■□ 3.63
StrnO55106 Gm24109-201ENSMUST00000175489 103 ntBASIC37.62■■■■□ 3.61
StrnO55106 Gm15045-201ENSMUST00000117359 883 ntBASIC36.82■■■■□ 3.48
StrnO55106 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
StrnO55106 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.64■■■■□ 3.46
StrnO55106 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
StrnO55106 Gm23366-201ENSMUST00000175022 89 ntBASIC36.23■■■■□ 3.39
StrnO55106 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
StrnO55106 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
StrnO55106 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
StrnO55106 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
StrnO55106 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.16■■■■□ 3.22
StrnO55106 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
StrnO55106 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
StrnO55106 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.84■■■■□ 3.17
StrnO55106 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.83■■■■□ 3.17
StrnO55106 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
StrnO55106 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
StrnO55106 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
StrnO55106 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
StrnO55106 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
StrnO55106 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.36■■■■□ 3.09
StrnO55106 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.35■■■■□ 3.09
StrnO55106 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
StrnO55106 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
StrnO55106 Gm25238-201ENSMUST00000174914 89 ntBASIC34.27■■■■□ 3.08
StrnO55106 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
StrnO55106 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.92■■■■□ 3.02
StrnO55106 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
StrnO55106 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.75■■■□□ 2.99
StrnO55106 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.68■■■□□ 2.98
StrnO55106 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
StrnO55106 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
StrnO55106 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.39■■■□□ 2.94
StrnO55106 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.36■■■□□ 2.93
StrnO55106 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
StrnO55106 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.34■■■□□ 2.93
StrnO55106 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.29■■■□□ 2.92
StrnO55106 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
StrnO55106 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.05■■■□□ 2.88
StrnO55106 Gm27325-201ENSMUST00000175467 74 ntBASIC33.03■■■□□ 2.88
StrnO55106 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.01■■■□□ 2.87
StrnO55106 Gm25262-201ENSMUST00000174934 133 ntBASIC32.99■■■□□ 2.87
StrnO55106 Psd-208ENSMUST00000224556 2034 ntBASIC32.87■■■□□ 2.85
StrnO55106 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
StrnO55106 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
StrnO55106 Rab21-202ENSMUST00000218831 843 ntBASIC32.57■■■□□ 2.8
StrnO55106 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
StrnO55106 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
StrnO55106 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.53■■■□□ 2.8
StrnO55106 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.5■■■□□ 2.79
StrnO55106 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.48■■■□□ 2.79
StrnO55106 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.4■■■□□ 2.78
StrnO55106 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
StrnO55106 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.34■■■□□ 2.77
StrnO55106 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
StrnO55106 Gm26115-201ENSMUST00000175605 87 ntBASIC32.25■■■□□ 2.75
StrnO55106 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
StrnO55106 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
StrnO55106 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
StrnO55106 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
StrnO55106 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
StrnO55106 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.12■■■□□ 2.73
StrnO55106 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
StrnO55106 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
StrnO55106 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
StrnO55106 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.03■■■□□ 2.72
StrnO55106 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32■■■□□ 2.71
StrnO55106 Gm8109-201ENSMUST00000194076 746 ntBASIC31.97■■■□□ 2.71
StrnO55106 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.97■■■□□ 2.71
StrnO55106 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
StrnO55106 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
StrnO55106 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.93■■■□□ 2.7
StrnO55106 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
StrnO55106 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
StrnO55106 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.83■■■□□ 2.69
StrnO55106 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
StrnO55106 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
StrnO55106 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
StrnO55106 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
StrnO55106 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
StrnO55106 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
StrnO55106 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
StrnO55106 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
StrnO55106 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.56■■■□□ 2.64
StrnO55106 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
StrnO55106 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
StrnO55106 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
StrnO55106 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.47■■■□□ 2.63
StrnO55106 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
StrnO55106 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.4■■■□□ 2.62
StrnO55106 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
StrnO55106 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
StrnO55106 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.34■■■□□ 2.61
StrnO55106 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
StrnO55106 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
StrnO55106 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms