RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	RTT102	P53330	157 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	ESBP6	P53918	673 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	RPC11	Q04307	110 aa	Predicted RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	RLM1	Q12224	676 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	NDJ1	Q12366	352 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	MDM20	Q12387	796 aa	Known RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	SFG1	Q12507	346 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	PDA1	P16387	420 aa	Known RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	VPS33	P20795	691 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	PPH22	P23595	377 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	ADH7	P25377	361 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	ADY2	P25613	283 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	BEM1	P29366	551 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	MVD1	P32377	396 aa	Known RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	HXT1	P32465	570 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	OCT1	P35999	772 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	PTK1	P36002	662 aa	Predicted RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	TUL1	P36096	758 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	PET100	P38958	111 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	YHC3	P47040	408 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	PRP31	P49704	494 aa	Predicted RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	IMD4	P50094	524 aa	Known RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	MPS2	P53159	387 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	SKO1	Q02100	647 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	RPM2	Q02773	1202 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	MTG1	Q03151	367 aa	Predicted RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	RLI1	Q03195	608 aa	Known RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	RRP17	Q04031	235 aa	Predicted RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	ERV41	Q04651	352 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	ECM30	Q06673	1274 aa		5.92	□□□□□ -1.46
TFB4	YPR056W	LEA1	Q08963	238 aa	Predicted RBP	5.92	□□□□□ -1.46
TFB4	YPR056W	ILV2	P07342	687 aa	Known RBP	5.91	□□□□□ -1.46
TFB4	YPR056W	ERG20	P08524	352 aa	Known RBP	5.91	□□□□□ -1.46
TFB4	YPR056W	CKA2	P19454	339 aa		5.91	□□□□□ -1.46
TFB4	YPR056W	END3	P39013	349 aa		5.91	□□□□□ -1.46
TFB4	YPR056W	BRO1	P48582	844 aa		5.91	□□□□□ -1.46
TFB4	YPR056W	TOM22	P49334	152 aa		5.91	□□□□□ -1.46
TFB4	YPR056W	COQ6	P53318	479 aa		5.91	□□□□□ -1.46
TFB4	YPR056W	SRL4	Q03085	281 aa		5.91	□□□□□ -1.46
TFB4	YPR056W	RRP45	Q05636	305 aa	Known RBP	5.91	□□□□□ -1.46
TFB4	YPR056W	STE23	Q06010	1027 aa		5.91	□□□□□ -1.46
TFB4	YPR056W	RKM1	Q08961	583 aa	Predicted RBP	5.91	□□□□□ -1.46
TFB4	YPR056W	FMP40	Q08968	688 aa	Predicted RBP	5.91	□□□□□ -1.46
TFB4	YPR056W	PDE2	P06776	526 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	SEC12	P11655	471 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	SRB5	P32585	307 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	ZTA1	P38230	334 aa	Known RBP	5.9	□□□□□ -1.46
TFB4	YPR056W	YNL195C	P40168	261 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	CIN1	P40987	1014 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	BAP3	P41815	604 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	BNA6	P43619	295 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	BIT61	P47041	543 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	URB2	P47108	1174 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	COX18	P53239	316 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	RSM28	Q03430	361 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	YMR130W	Q04223	302 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	BRX1	Q08235	291 aa	Known RBP	5.9	□□□□□ -1.46
TFB4	YPR056W	AIM41	Q12032	185 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.9	□□□□□ -1.46	not detected
TFB4	YPR056W	GLE1	Q12315	538 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	LAG2	Q92325	660 aa		5.9	□□□□□ -1.46
TFB4	YPR056W	ARG81	P05085	880 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	RAP1	P11938	827 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	GAL3	P13045	520 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	PRP16	P15938	1071 aa	Predicted RBP	5.89	□□□□□ -1.47
TFB4	YPR056W	CDC23	P16522	626 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	YPK2	P18961	677 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	SAG1	P20840	650 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	VMA16	P23968	213 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	URK1	P27515	501 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	PRO3	P32263	286 aa	Known RBP	5.89	□□□□□ -1.47
TFB4	YPR056W	ADE17	P38009	592 aa	Known RBP	5.89	□□□□□ -1.47
TFB4	YPR056W	EHT1	P38295	451 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	SWC5	P38326	303 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	CRG1	P38892	291 aa	RIP-Chip data	5.89	□□□□□ -1.47	not detected
TFB4	YPR056W	RCY1	P39531	840 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	FMP52	P40008	231 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	FMC1	P40491	155 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	IRC8	P47046	822 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	ABM1	P47146	123 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	RMR1	P53060	241 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	INA17	Q02888	182 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	FIN1	Q03898	291 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	GPN3	Q06543	272 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	SIL1	Q08199	421 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	IRC13	Q08630	104 aa		5.89	□□□□□ -1.47
TFB4	YPR056W	ARG4	P04076	463 aa	Predicted RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	RNR2	P09938	399 aa	Known RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	TUP1	P16649	713 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	PMA2	P19657	947 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	SEC62	P21825	274 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	MEK1	P24719	497 aa	Predicted RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	RVS161	P25343	265 aa	Known RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	PDB1	P32473	366 aa	Known RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	SPR1	P32603	445 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	MAK5	P38112	773 aa	Predicted RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	SMF2	P38778	549 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	RIX1	P38883	763 aa	Predicted RBP	5.88	□□□□□ -1.47
TFB4	YPR056W	TMN3	P40071	706 aa		5.88	□□□□□ -1.47
TFB4	YPR056W	IDS2	P46958	469 aa		5.88	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms