RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C COR1P07256 457 aa8.1□□□□□ -1.11
PUP1YOR157C DCG1P32460 244 aa8.1□□□□□ -1.11
PUP1YOR157C SEC61P32915 480 aa8.1□□□□□ -1.11
PUP1YOR157C MNN1P39106 762 aa8.1□□□□□ -1.11
PUP1YOR157C PRP39P39682 629 aaKnown RBP8.1□□□□□ -1.11
PUP1YOR157C HAT2P39984 401 aa8.1□□□□□ -1.11
PUP1YOR157C UTP25P40498 721 aaKnown RBP8.1□□□□□ -1.11
PUP1YOR157C YMR114CQ04471 368 aaKnown RBP8.1□□□□□ -1.11
PUP1YOR157C VPS38Q05919 439 aa8.1□□□□□ -1.11
PUP1YOR157C CRN1Q06440 651 aa8.1□□□□□ -1.11
PUP1YOR157C RRP40Q08285 240 aaKnown RBP8.1□□□□□ -1.11
PUP1YOR157C YPR011CQ12251 326 aa8.1□□□□□ -1.11
PUP1YOR157C BRR1Q99177 341 aaPredicted RBP8.1□□□□□ -1.11
PUP1YOR157C RPP2BP02400 110 aaKnown RBP8.09□□□□□ -1.11
PUP1YOR157C STE3P06783 470 aa8.09□□□□□ -1.11
PUP1YOR157C HMG1P12683 1054 aa8.09□□□□□ -1.11
PUP1YOR157C HXT4P32467 576 aa8.09□□□□□ -1.11
PUP1YOR157C POP4P38336 279 aa8.09□□□□□ -1.11
PUP1YOR157C HXT6P39003 570 aaKnown RBP8.09□□□□□ -1.11
PUP1YOR157C HXT7P39004 570 aa8.09□□□□□ -1.11
PUP1YOR157C BOL2P53082 120 aa8.09□□□□□ -1.11
PUP1YOR157C CLD1P53264 445 aa8.09□□□□□ -1.11
PUP1YOR157C MTG1Q03151 367 aaPredicted RBP8.09□□□□□ -1.11
PUP1YOR157C GOT1Q03554 138 aa8.09□□□□□ -1.11
PUP1YOR157C BCH1Q05029 724 aa8.09□□□□□ -1.11
PUP1YOR157C CDC123Q05791 360 aa8.09□□□□□ -1.11
PUP1YOR157C RCN2Q12044 265 aa8.09□□□□□ -1.11
PUP1YOR157C GLO4Q12320 285 aa8.09□□□□□ -1.11
PUP1YOR157C TEF1P02994 458 aaKnown RBP8.08□□□□□ -1.12
PUP1YOR157C PEP5P12868 1029 aa8.08□□□□□ -1.12
PUP1YOR157C RSR1P13856 272 aa8.08□□□□□ -1.12
PUP1YOR157C REC107P21651 314 aa8.08□□□□□ -1.12
PUP1YOR157C SSH4P32343 579 aa8.08□□□□□ -1.12
PUP1YOR157C GCD6P32501 712 aaKnown RBP8.08□□□□□ -1.12
PUP1YOR157C CDC5P32562 705 aa8.08□□□□□ -1.12
PUP1YOR157C APE4P38821 490 aa8.08□□□□□ -1.12
PUP1YOR157C SOL3P38858 249 aa8.08□□□□□ -1.12
PUP1YOR157C SPC97P38863 823 aa8.08□□□□□ -1.12
PUP1YOR157C EFM4P40516 257 aa8.08□□□□□ -1.12
PUP1YOR157C PRM2P40534 656 aa8.08□□□□□ -1.12
PUP1YOR157C STE24P47154 453 aa8.08□□□□□ -1.12
PUP1YOR157C SEH1P53011 349 aaKnown RBP8.08□□□□□ -1.12
PUP1YOR157C PBP1P53297 722 aaKnown RBP8.08□□□□□ -1.12
PUP1YOR157C YMR210WQ03649 449 aa8.08□□□□□ -1.12
PUP1YOR157C TDA9Q04545 1251 aa8.08□□□□□ -1.12
PUP1YOR157C GLO2Q05584 274 aa8.08□□□□□ -1.12
PUP1YOR157C AIM41Q12032 185 aa8.08□□□□□ -1.12
PUP1YOR157C UBX3Q12229 455 aa8.08□□□□□ -1.12
PUP1YOR157C PBS2P08018 668 aa8.07□□□□□ -1.12
PUP1YOR157C SSC1P0CS90 654 aaKnown RBP8.07□□□□□ -1.12
PUP1YOR157C STP22P25604 385 aa8.07□□□□□ -1.12
PUP1YOR157C DHR2P36009 735 aaPredicted RBP8.07□□□□□ -1.12
PUP1YOR157C RRN3P36070 627 aa8.07□□□□□ -1.12
PUP1YOR157C OMA1P36163 345 aa8.07□□□□□ -1.12
PUP1YOR157C ZRG8P40021 1076 aa8.07□□□□□ -1.12
PUP1YOR157C UBP6P43593 499 aaKnown RBP8.07□□□□□ -1.12
PUP1YOR157C MET12P46151 657 aa8.07□□□□□ -1.12
PUP1YOR157C CCT8P47079 568 aaKnown RBP8.07□□□□□ -1.12
PUP1YOR157C BPL1P48445 690 aaPredicted RBP8.07□□□□□ -1.12
PUP1YOR157C TAF12Q03761 539 aa8.07□□□□□ -1.12
PUP1YOR157C CUE5Q08412 411 aaKnown RBP8.07□□□□□ -1.12
PUP1YOR157C RRP42Q12277 265 aaPredicted RBP8.07□□□□□ -1.12
PUP1YOR157C RAD1P06777 1100 aa8.06□□□□□ -1.12
PUP1YOR157C SPS100P13130 326 aa8.06□□□□□ -1.12
PUP1YOR157C MAK32P23060 363 aa8.06□□□□□ -1.12
PUP1YOR157C ASC1P38011 319 aaKnown RBP8.06□□□□□ -1.12
PUP1YOR157C RKM3P38222 552 aa8.06□□□□□ -1.12
PUP1YOR157C VMA13P41807 478 aaKnown RBP8.06□□□□□ -1.12
PUP1YOR157C SEC27P41811 889 aaKnown RBP8.06□□□□□ -1.12
PUP1YOR157C ECO1P43605 281 aa8.06□□□□□ -1.12
PUP1YOR157C YNL260CP53846 198 aa8.06□□□□□ -1.12
PUP1YOR157C YPR174CQ06616 221 aaPredicted RBP8.06□□□□□ -1.12
PUP1YOR157C MCM1P11746 286 aa8.05□□□□□ -1.12
PUP1YOR157C PTC6P25646 442 aa8.05□□□□□ -1.12
PUP1YOR157C URA7P28274 579 aaKnown RBP8.05□□□□□ -1.12
PUP1YOR157C GCD11P32481 527 aaKnown RBP8.05□□□□□ -1.12
PUP1YOR157C PTM1P32857 523 aa8.05□□□□□ -1.12
PUP1YOR157C OAR1P35731 278 aa8.05□□□□□ -1.12
PUP1YOR157C RSM22P36056 628 aa8.05□□□□□ -1.12
PUP1YOR157C GIP2P40036 548 aa8.05□□□□□ -1.12
PUP1YOR157C CAB2P40506 365 aa8.05□□□□□ -1.12
PUP1YOR157C GUS1P46655 708 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
PUP1YOR157C MUP1P50276 574 aa8.05□□□□□ -1.12
PUP1YOR157C ALF1P53904 254 aa8.05□□□□□ -1.12
PUP1YOR157C RSC2Q06488 889 aa8.05□□□□□ -1.12
PUP1YOR157C MCH5Q08777 521 aa8.05□□□□□ -1.12
PUP1YOR157C ARG4P04076 463 aaPredicted RBP8.04□□□□□ -1.12
PUP1YOR157C VPS33P20795 691 aa8.04□□□□□ -1.12
PUP1YOR157C CMK1P27466 446 aaKnown RBP8.04□□□□□ -1.12
PUP1YOR157C MLS1P30952 554 aa8.04□□□□□ -1.12
PUP1YOR157C YKL100CP34248 587 aa8.04□□□□□ -1.12
PUP1YOR157C CBP4P37267 147 aa8.04□□□□□ -1.12
PUP1YOR157C MUP3P38734 546 aa8.04□□□□□ -1.12
PUP1YOR157C RIX1P38883 763 aaPredicted RBP8.04□□□□□ -1.12
PUP1YOR157C EMP65P40085 556 aa8.04□□□□□ -1.12
PUP1YOR157C SEC9P40357 651 aa8.04□□□□□ -1.12
PUP1YOR157C MAD2P40958 196 aa8.04□□□□□ -1.12
PUP1YOR157C ALG12P53730 551 aa8.04□□□□□ -1.12
PUP1YOR157C SPO20Q04359 397 aa8.04□□□□□ -1.12
PUP1YOR157C APC4Q04601 652 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms