RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W THI2P38141 450 aa2.59□□□□□ -1.99
PEP12YOR036W TCM62P38228 572 aaKnown RBP2.59□□□□□ -1.99
PEP12YOR036W YMR147WP40218 223 aaKnown RBP2.59□□□□□ -1.99
PEP12YOR036W ZIM17P42844 174 aa2.59□□□□□ -1.99
PEP12YOR036W VPS25P47142 202 aa2.59□□□□□ -1.99
PEP12YOR036W FMS1P50264 508 aa2.59□□□□□ -1.99
PEP12YOR036W ART5P53244 586 aaKnown RBP2.59□□□□□ -1.99
PEP12YOR036W SMM1P53720 384 aaKnown RBP2.59□□□□□ -1.99
PEP12YOR036W SKO1Q02100 647 aa2.59□□□□□ -1.99
PEP12YOR036W NUP100Q02629 959 aa2.59□□□□□ -1.99
PEP12YOR036W ERO1Q03103 563 aa2.59□□□□□ -1.99
PEP12YOR036W RRP45Q05636 305 aaKnown RBP2.59□□□□□ -1.99
PEP12YOR036W YDL057WQ07379 328 aa2.59□□□□□ -1.99
PEP12YOR036W THP1Q08231 455 aa2.59□□□□□ -1.99
PEP12YOR036W PDH1Q12428 516 aaKnown RBP2.59□□□□□ -1.99
PEP12YOR036W BRR1Q99177 341 aaPredicted RBP2.59□□□□□ -1.99
PEP12YOR036W RAV1P47104 1357 aa2.59□□□□□ -2
PEP12YOR036W SUC2P00724 532 aa2.58□□□□□ -2
PEP12YOR036W GPH1P06738 902 aaKnown RBP2.58□□□□□ -2
PEP12YOR036W RAD52P06778 471 aaKnown RBP2.58□□□□□ -2
PEP12YOR036W RHO2P06781 192 aa2.58□□□□□ -2
PEP12YOR036W TYR1P20049 452 aa2.58□□□□□ -2
PEP12YOR036W GID7P25569 745 aa2.58□□□□□ -2
PEP12YOR036W PUP2P32379 260 aa2.58□□□□□ -2
PEP12YOR036W TFB1P32776 642 aa2.58□□□□□ -2
PEP12YOR036W NIP100P33420 868 aa2.58□□□□□ -2
PEP12YOR036W MSN2P33748 704 aa2.58□□□□□ -2
PEP12YOR036W ROT2P38138 954 aa2.58□□□□□ -2
PEP12YOR036W DUG2P38149 878 aa2.58□□□□□ -2
PEP12YOR036W BNA4P38169 460 aa2.58□□□□□ -2
PEP12YOR036W SLM4P38247 162 aa2.58□□□□□ -2
PEP12YOR036W RRT2P38332 387 aa2.58□□□□□ -2
PEP12YOR036W KEL1P38853 1164 aaKnown RBP2.58□□□□□ -2
PEP12YOR036W LCB2P40970 561 aa2.58□□□□□ -2
PEP12YOR036W IAH1P41734 238 aa2.58□□□□□ -2
PEP12YOR036W URB2P47108 1174 aa2.58□□□□□ -2
PEP12YOR036W COS5P47187 383 aa2.58□□□□□ -2
PEP12YOR036W YGR149WP48236 432 aa2.58□□□□□ -2
PEP12YOR036W ALT2P52892 507 aa2.58□□□□□ -2
PEP12YOR036W DUG3P53871 357 aa2.58□□□□□ -2
PEP12YOR036W YNL181WP53878 407 aa2.58□□□□□ -2
PEP12YOR036W RHO4Q00246 291 aa2.58□□□□□ -2
PEP12YOR036W SHR3Q02774 210 aa2.58□□□□□ -2
PEP12YOR036W OAZ1Q02803 292 aa2.58□□□□□ -2
PEP12YOR036W ECI1Q05871 280 aa2.58□□□□□ -2
PEP12YOR036W SSK1Q07084 712 aa2.58□□□□□ -2
PEP12YOR036W COS7Q07788 383 aa2.58□□□□□ -2
PEP12YOR036W RDR1Q08904 546 aa2.58□□□□□ -2
PEP12YOR036W APL5Q08951 932 aaKnown RBP2.58□□□□□ -2
PEP12YOR036W YLR112WQ12130 139 aa2.58□□□□□ -2
PEP12YOR036W RRD2Q12461 358 aa2.58□□□□□ -2
PEP12YOR036W PAR32Q12515 295 aaKnown RBP2.58□□□□□ -2
PEP12YOR036W RIP1P08067 215 aa2.57□□□□□ -2
PEP12YOR036W CDC23P16522 626 aa2.57□□□□□ -2
PEP12YOR036W RPS2P25443 254 aaKnown RBP2.57□□□□□ -2
PEP12YOR036W GEX1P25596 615 aa2.57□□□□□ -2
PEP12YOR036W GYP6P32806 458 aa2.57□□□□□ -2
PEP12YOR036W MDL1P33310 695 aa2.57□□□□□ -2
PEP12YOR036W LTV1P34078 463 aa2.57□□□□□ -2
PEP12YOR036W SPC34P36131 295 aa2.57□□□□□ -2
PEP12YOR036W YPK3P38070 525 aa2.57□□□□□ -2
PEP12YOR036W RXT2P38255 430 aa2.57□□□□□ -2
PEP12YOR036W NTC20P38302 140 aaPredicted RBP2.57□□□□□ -2
PEP12YOR036W PCL6P40038 420 aa2.57□□□□□ -2
PEP12YOR036W SEC28P40509 296 aaKnown RBP2.57□□□□□ -2
PEP12YOR036W RTS2P40962 232 aa2.57□□□□□ -2
PEP12YOR036W YJL055WP47044 245 aa2.57□□□□□ -2
PEP12YOR036W TOM22P49334 152 aa2.57□□□□□ -2
PEP12YOR036W OCA1P50946 238 aaPredicted RBP2.57□□□□□ -2
PEP12YOR036W YGL138CP53122 345 aa2.57□□□□□ -2
PEP12YOR036W BUD32P53323 261 aa2.57□□□□□ -2
PEP12YOR036W IMP4P53941 290 aaKnown RBP2.57□□□□□ -2
PEP12YOR036W YPL014WQ02606 381 aa2.57□□□□□ -2
PEP12YOR036W HOT1Q03213 719 aa2.57□□□□□ -2
PEP12YOR036W EKI1Q03764 534 aa2.57□□□□□ -2
PEP12YOR036W FMP42Q04991 504 aa2.57□□□□□ -2
PEP12YOR036W YLR281CQ05863 155 aa2.57□□□□□ -2
PEP12YOR036W SIL1Q08199 421 aa2.57□□□□□ -2
PEP12YOR036W SPE3Q12074 293 aaKnown RBP2.57□□□□□ -2
PEP12YOR036W TIP41Q12199 356 aa2.57□□□□□ -2
PEP12YOR036W GPM3Q12326 303 aa2.57□□□□□ -2
PEP12YOR036W ARP6Q12509 438 aa2.57□□□□□ -2
PEP12YOR036W HIP1P06775 603 aa2.56□□□□□ -2
PEP12YOR036W BAR1P12630 587 aa2.56□□□□□ -2
PEP12YOR036W NAT1P12945 854 aaKnown RBP2.56□□□□□ -2
PEP12YOR036W TPM1P17536 199 aaKnown RBP2.56□□□□□ -2
PEP12YOR036W MNE1P24720 663 aa2.56□□□□□ -2
PEP12YOR036W YCR007CP25354 239 aa2.56□□□□□ -2
PEP12YOR036W KRE2P27809 442 aa2.56□□□□□ -2
PEP12YOR036W AFG1P32317 509 aa2.56□□□□□ -2
PEP12YOR036W ATP11P32453 318 aa2.56□□□□□ -2
PEP12YOR036W VPH1P32563 840 aaKnown RBP2.56□□□□□ -2
PEP12YOR036W PHD1P36093 366 aa2.56□□□□□ -2
PEP12YOR036W ARA1P38115 344 aa2.56□□□□□ -2
PEP12YOR036W SLX1P38324 304 aa2.56□□□□□ -2
PEP12YOR036W GDI1P39958 451 aaKnown RBP2.56□□□□□ -2
PEP12YOR036W TFG2P41896 400 aaPredicted RBP2.56□□□□□ -2
PEP12YOR036W FET5P43561 622 aa2.56□□□□□ -2
PEP12YOR036W ECM27P47144 725 aa2.56□□□□□ -2
PEP12YOR036W RMD9P53140 646 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms