RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C HER1Q12276 1246 aa2.58□□□□□ -2
DNL4YOR005C TRM13Q12383 476 aa2.58□□□□□ -2
DNL4YOR005C YDL007C-AQ2V2Q0 85 aa2.58□□□□□ -2
DNL4YOR005C YPR053CQ6Q5F3 151 aa2.58□□□□□ -2
DNL4YOR005C RAD1P06777 1100 aa2.58□□□□□ -2
DNL4YOR005C ABF1P14164 731 aa2.58□□□□□ -2
DNL4YOR005C ART10P18634 518 aaKnown RBP2.58□□□□□ -2
DNL4YOR005C AFG1P32317 509 aa2.58□□□□□ -2
DNL4YOR005C SIP1P32578 815 aa2.58□□□□□ -2
DNL4YOR005C UGP1P32861 499 aaKnown RBP2.58□□□□□ -2
DNL4YOR005C LST4P34239 828 aa2.58□□□□□ -2
DNL4YOR005C BMH2P34730 273 aaKnown RBP2.58□□□□□ -2
DNL4YOR005C TUL1P36096 758 aa2.58□□□□□ -2
DNL4YOR005C MTG2P38860 518 aa2.58□□□□□ -2
DNL4YOR005C ECM10P39987 644 aa2.58□□□□□ -2
DNL4YOR005C OSW5P40219 148 aa2.58□□□□□ -2
DNL4YOR005C DPB11P47027 764 aaPredicted RBP2.58□□□□□ -2
DNL4YOR005C UBX6P47049 396 aa2.58□□□□□ -2
DNL4YOR005C DIA3P52290 468 aa2.58□□□□□ -2
DNL4YOR005C UBP16Q02863 499 aa2.58□□□□□ -2
DNL4YOR005C ALE1Q08548 619 aa2.58□□□□□ -2
DNL4YOR005C TGS1Q12052 315 aa2.58□□□□□ -2
DNL4YOR005C SSK22P25390 1331 aaPredicted RBP2.58□□□□□ -2
DNL4YOR005C YMR085WP0CF18 432 aa2.57□□□□□ -2
DNL4YOR005C DAL80P26343 269 aa2.57□□□□□ -2
DNL4YOR005C LAC1P28496 418 aa2.57□□□□□ -2
DNL4YOR005C NIP1P32497 812 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C HIS7P33734 552 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C LOT5P34234 306 aa2.57□□□□□ -2
DNL4YOR005C NET1P47035 1189 aa2.57□□□□□ -2
DNL4YOR005C SPT20P50875 604 aa2.57□□□□□ -2
DNL4YOR005C PIB2P53191 635 aa2.57□□□□□ -2
DNL4YOR005C RPT4P53549 437 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C IST1P53843 298 aaPredicted RBP2.57□□□□□ -2
DNL4YOR005C RHO5P53879 331 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C SKO1Q02100 647 aa2.57□□□□□ -2
DNL4YOR005C ACL4Q03771 387 aa2.57□□□□□ -2
DNL4YOR005C SPH1Q06160 661 aa2.57□□□□□ -2
DNL4YOR005C YLH47Q06493 454 aa2.57□□□□□ -2
DNL4YOR005C CRT10Q08226 957 aa2.57□□□□□ -2
DNL4YOR005C MED7Q08278 222 aa2.57□□□□□ -2
DNL4YOR005C CFT2Q12102 859 aaPredicted RBP2.57□□□□□ -2
DNL4YOR005C USV1Q12132 391 aa2.57□□□□□ -2
DNL4YOR005C RIO1Q12196 484 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C INP53Q12271 1107 aa2.57□□□□□ -2
DNL4YOR005C MDY2Q12285 212 aa2.57□□□□□ -2
DNL4YOR005C CEX1Q12453 761 aa2.57□□□□□ -2
DNL4YOR005C UTP10P42945 1769 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C HXK2P04807 486 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C RPL6BP05739 176 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C CDC37P06101 506 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C CUP1-1P0CX80 61 aa2.57□□□□□ -2
DNL4YOR005C CUP1-2P0CX81 61 aa2.57□□□□□ -2
DNL4YOR005C OM45P16547 393 aa2.57□□□□□ -2
DNL4YOR005C DBP3P20447 523 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C HXT1P32465 570 aa2.57□□□□□ -2
DNL4YOR005C LOS1P33418 1100 aaPredicted RBP2.57□□□□□ -2
DNL4YOR005C APL3P38065 1025 aa2.57□□□□□ -2
DNL4YOR005C OLA1P38219 394 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C LAS21P40367 830 aa2.57□□□□□ -2
DNL4YOR005C SHQ1P40486 507 aaPredicted RBP2.57□□□□□ -2
DNL4YOR005C ECM27P47144 725 aa2.57□□□□□ -2
DNL4YOR005C COS5P47187 383 aa2.57□□□□□ -2
DNL4YOR005C TOM22P49334 152 aa2.57□□□□□ -2
DNL4YOR005C NMA2P53204 395 aa2.57□□□□□ -2
DNL4YOR005C RTC4P53850 401 aa2.57□□□□□ -2
DNL4YOR005C YNL144CP53907 740 aa2.57□□□□□ -2
DNL4YOR005C RPL6AQ02326 176 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C SPO19Q03029 223 aa2.57□□□□□ -2
DNL4YOR005C PPM1Q04081 328 aa2.57□□□□□ -2
DNL4YOR005C SPC24Q04477 213 aa2.57□□□□□ -2
DNL4YOR005C COS7Q07788 383 aa2.57□□□□□ -2
DNL4YOR005C CMS1Q07897 291 aaKnown RBP2.57□□□□□ -2
DNL4YOR005C TAF10Q12030 206 aa2.57□□□□□ -2
DNL4YOR005C VPS54Q12071 889 aa2.57□□□□□ -2
DNL4YOR005C UBX3Q12229 455 aa2.57□□□□□ -2
DNL4YOR005C KRS1P15180 591 aaKnown RBP2.56□□□□□ -2
DNL4YOR005C PPH22P23595 377 aa2.56□□□□□ -2
DNL4YOR005C ELO2P25358 347 aa2.56□□□□□ -2
DNL4YOR005C RPL5P26321 297 aaKnown RBP2.56□□□□□ -2
DNL4YOR005C SOF1P33750 489 aaKnown RBP2.56□□□□□ -2
DNL4YOR005C SRB2P34162 210 aa2.56□□□□□ -2
DNL4YOR005C YET1P35723 206 aa2.56□□□□□ -2
DNL4YOR005C SPP381P38282 291 aaPredicted RBP2.56□□□□□ -2
DNL4YOR005C VBA2P38358 474 aaKnown RBP2.56□□□□□ -2
DNL4YOR005C KSP1P38691 1029 aaKnown RBP2.56□□□□□ -2
DNL4YOR005C WSS1P38838 269 aa2.56□□□□□ -2
DNL4YOR005C LIN1P38852 340 aaPredicted RBP2.56□□□□□ -2
DNL4YOR005C MLH1P38920 769 aa2.56□□□□□ -2
DNL4YOR005C YDR089WP38966 869 aa2.56□□□□□ -2
DNL4YOR005C ELO1P39540 310 aa2.56□□□□□ -2
DNL4YOR005C YJL132WP47014 750 aa2.56□□□□□ -2
DNL4YOR005C YGR149WP48236 432 aa2.56□□□□□ -2
DNL4YOR005C MCM6P53091 1017 aaKnown RBP2.56□□□□□ -2
DNL4YOR005C YGL138CP53122 345 aa2.56□□□□□ -2
DNL4YOR005C AFT2Q08957 416 aa2.56□□□□□ -2
DNL4YOR005C NBL1Q3E7Y6 73 aa2.56□□□□□ -2
DNL4YOR005C ILV2P07342 687 aaKnown RBP2.56□□□□□ -2
DNL4YOR005C RAD57P25301 460 aa2.56□□□□□ -2
DNL4YOR005C IMG1P25626 169 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms