RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	PRO2	P54885	456 aa	Known RBP	13.98	□□□□□ -0.17
SHR5	YOL110W	DYN3	Q04949	312 aa		13.98	□□□□□ -0.17
SHR5	YOL110W	BSC2	Q05611	235 aa		13.98	□□□□□ -0.17
SHR5	YOL110W	YDL129W	Q07555	291 aa		13.98	□□□□□ -0.17
SHR5	YOL110W	TPK2	P06245	380 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	RPS21A	P0C0V8	87 aa	Known RBP	13.97	□□□□□ -0.17
SHR5	YOL110W	KIN2	P13186	1147 aa	Known RBP	13.97	□□□□□ -0.17
SHR5	YOL110W	CSM1	P25651	190 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	AYR1	P40471	297 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	HPM1	P40481	377 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	CIS3	P47001	227 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	EGD1	Q02642	157 aa	Known RBP	13.97	□□□□□ -0.17
SHR5	YOL110W	HAL9	Q12180	1030 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	YOR114W	Q12219	294 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	YLL054C	Q12244	843 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	JLP1	Q12358	412 aa		13.97	□□□□□ -0.17
SHR5	YOL110W	RAS2	P01120	322 aa	Known RBP	13.96	□□□□□ -0.17
SHR5	YOL110W	RPS4A	P0CX35	261 aa	Known RBP	13.96	□□□□□ -0.17
SHR5	YOL110W	RPS4B	P0CX36	261 aa	Known RBP	13.96	□□□□□ -0.17
SHR5	YOL110W	CMP2	P14747	604 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	PHO81	P17442	1178 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	SAN1	P22470	610 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	EMC3	P36039	253 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	FMP32	P43557	207 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	ERG26	P53199	349 aa	Known RBP	13.96	□□□□□ -0.17
SHR5	YOL110W	RHO3	Q00245	231 aa	Known RBP	13.96	□□□□□ -0.17
SHR5	YOL110W	ACL4	Q03771	387 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	EAF1	Q06337	982 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	NMD4	Q12129	218 aa		13.96	□□□□□ -0.17
SHR5	YOL110W	TRX3	P25372	127 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	ATO2	P32907	282 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	DOM34	P33309	386 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	ARA1	P38115	344 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	RRN10	P38204	145 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	SEC26	P41810	973 aa	Known RBP	13.95	□□□□□ -0.18
SHR5	YOL110W	AIM22	P47051	409 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	HXT16	P47185	567 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	SUN4	P53616	420 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	HXT15	P54854	567 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	MMT1	Q03218	510 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	EFR3	Q03653	782 aa	Known RBP	13.95	□□□□□ -0.18
SHR5	YOL110W	HSP31	Q04432	237 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	YML096W	Q04489	525 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	GGA1	Q06336	557 aa		13.95	□□□□□ -0.18
SHR5	YOL110W	RPN5	Q12250	445 aa	Known RBP	13.95	□□□□□ -0.18
SHR5	YOL110W	ATP6	P00854	259 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	KAR1	P11927	433 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	REC107	P21651	314 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	SPS22	P25380	463 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	ATP7	P30902	174 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	SFC1	P33303	322 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	KKQ8	P36004	724 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	CBP4	P37267	147 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	YHR033W	P38690	423 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	CEM1	P39525	442 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	APQ12	P40532	138 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	IMA5	P40884	581 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	AZF1	P41696	914 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	RPM2	Q02773	1202 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	YVC1	Q12324	675 aa		13.94	□□□□□ -0.18
SHR5	YOL110W	ATP4	P05626	244 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	MRP13	P12686	339 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	MEF1	P25039	761 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	SPT16	P32558	1035 aa	Known RBP	13.93	□□□□□ -0.18
SHR5	YOL110W	HES1	P35843	434 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	YKR078W	P36158	585 aa	Known RBP	13.93	□□□□□ -0.18
SHR5	YOL110W	IST2	P38250	946 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	RGA1	P39083	1007 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	PLB1	P39105	664 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	YPS6	P40583	537 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	UPF3	P48412	387 aa	Known RBP	13.93	□□□□□ -0.18
SHR5	YOL110W	ARE2	P53629	642 aa	Known RBP	13.93	□□□□□ -0.18
SHR5	YOL110W	MTQ2	Q03920	221 aa	Predicted RBP	13.93	□□□□□ -0.18
SHR5	YOL110W	YHC1	Q05900	231 aa	Known RBP	13.93	□□□□□ -0.18
SHR5	YOL110W	ATG26	Q06321	1198 aa		13.93	□□□□□ -0.18
SHR5	YOL110W	RTK1	Q12100	620 aa	Predicted RBP	13.93	□□□□□ -0.18
SHR5	YOL110W	ARG81	P05085	880 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	MSS116	P15424	664 aa	Known RBP	13.92	□□□□□ -0.18
SHR5	YOL110W	TYR1	P20049	452 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	GLG1	P36143	616 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	MRPL17	P36528	281 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	ATG7	P38862	630 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	JEM1	P40358	645 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	MAM33	P40513	266 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	YJL049W	P47048	450 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	DIA3	P52290	468 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	YMR010W	Q03687	405 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	MUS81	Q04149	632 aa	Predicted RBP	13.92	□□□□□ -0.18
SHR5	YOL110W	ROY1	Q04847	553 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	GPN2	Q08726	347 aa	Predicted RBP	13.92	□□□□□ -0.18
SHR5	YOL110W	NTO1	Q12311	748 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	YLR111W	Q12528	110 aa		13.92	□□□□□ -0.18
SHR5	YOL110W	LEU4	P06208	619 aa	Known RBP	13.91	□□□□□ -0.18
SHR5	YOL110W	FUR1	P18562	216 aa	Known RBP	13.91	□□□□□ -0.18
SHR5	YOL110W	PRI2	P20457	528 aa		13.91	□□□□□ -0.18
SHR5	YOL110W	PET127	P32606	800 aa		13.91	□□□□□ -0.18
SHR5	YOL110W	COS111	P38308	924 aa		13.91	□□□□□ -0.18
SHR5	YOL110W	LYS1	P38998	373 aa	RIP-Chip data	13.91	□□□□□ -0.18	RIP-Chip
SHR5	YOL110W	LTP1	P40347	161 aa		13.91	□□□□□ -0.18
SHR5	YOL110W	MNT3	P40549	630 aa		13.91	□□□□□ -0.18

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms