RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YAR028WP39548 234 aa8.41□□□□□ -1.06
RPD3YNL330C ERV46P39727 415 aa8.41□□□□□ -1.06
RPD3YNL330C MEP2P41948 499 aa8.41□□□□□ -1.06
RPD3YNL330C TIS11P47977 285 aa8.41□□□□□ -1.06
RPD3YNL330C ATH1P48016 1211 aa8.41□□□□□ -1.06
RPD3YNL330C AMA1P50082 593 aa8.41□□□□□ -1.06
RPD3YNL330C ATP22P50273 684 aaPredicted RBP8.41□□□□□ -1.06
RPD3YNL330C HXT15P54854 567 aa8.41□□□□□ -1.06
RPD3YNL330C PEX13P80667 386 aa8.41□□□□□ -1.06
RPD3YNL330C RCF1Q03713 159 aa8.41□□□□□ -1.06
RPD3YNL330C SSL1Q04673 461 aaPredicted RBP8.41□□□□□ -1.06
RPD3YNL330C THP1Q08231 455 aa8.41□□□□□ -1.06
RPD3YNL330C WTM1Q12363 437 aaKnown RBP8.41□□□□□ -1.06
RPD3YNL330C PEX11Q12462 236 aa8.41□□□□□ -1.06
RPD3YNL330C DST1P07273 309 aa8.4□□□□□ -1.06
RPD3YNL330C GCN3P14741 305 aa8.4□□□□□ -1.06
RPD3YNL330C GRR1P24814 1151 aa8.4□□□□□ -1.06
RPD3YNL330C PGS1P25578 521 aa8.4□□□□□ -1.06
RPD3YNL330C SFP1P32432 683 aa8.4□□□□□ -1.06
RPD3YNL330C TIP20P33891 701 aa8.4□□□□□ -1.06
RPD3YNL330C YCR087C-AP37263 153 aa8.4□□□□□ -1.06
RPD3YNL330C EMP65P40085 556 aa8.4□□□□□ -1.06
RPD3YNL330C GPI8P49018 411 aa8.4□□□□□ -1.06
RPD3YNL330C RRN5Q02983 363 aa8.4□□□□□ -1.06
RPD3YNL330C RSC9Q03124 581 aa8.4□□□□□ -1.06
RPD3YNL330C SPO71Q03868 1245 aa8.4□□□□□ -1.06
RPD3YNL330C RRP17Q04031 235 aaPredicted RBP8.4□□□□□ -1.06
RPD3YNL330C DBP9Q06218 594 aaKnown RBP8.4□□□□□ -1.06
RPD3YNL330C YPL191CQ08930 360 aa8.4□□□□□ -1.06
RPD3YNL330C YDR056CQ12025 205 aa8.4□□□□□ -1.06
RPD3YNL330C TRM10Q12400 293 aa8.4□□□□□ -1.06
RPD3YNL330C RPP1BP10622 106 aaKnown RBP8.39□□□□□ -1.07
RPD3YNL330C DAP2P18962 818 aa8.39□□□□□ -1.07
RPD3YNL330C MRPL9P31334 269 aa8.39□□□□□ -1.07
RPD3YNL330C GDH2P33327 1092 aaKnown RBP8.39□□□□□ -1.07
RPD3YNL330C POA1P38218 177 aa8.39□□□□□ -1.07
RPD3YNL330C EXO84P38261 753 aa8.39□□□□□ -1.07
RPD3YNL330C BMT2P38278 337 aa8.39□□□□□ -1.07
RPD3YNL330C UBA4P38820 440 aa8.39□□□□□ -1.07
RPD3YNL330C IPT1P38954 527 aa8.39□□□□□ -1.07
RPD3YNL330C SOP4P39543 234 aaPredicted RBP8.39□□□□□ -1.07
RPD3YNL330C YPL107WQ02873 248 aa8.39□□□□□ -1.07
RPD3YNL330C URC2Q04411 772 aa8.39□□□□□ -1.07
RPD3YNL330C RTN1Q04947 295 aaKnown RBP8.39□□□□□ -1.07
RPD3YNL330C COS7Q07788 383 aa8.39□□□□□ -1.07
RPD3YNL330C MLH3Q12083 715 aa8.39□□□□□ -1.07
RPD3YNL330C YOR012WQ12351 137 aa8.39□□□□□ -1.07
RPD3YNL330C RPN13O13563 156 aa8.38□□□□□ -1.07
RPD3YNL330C TIM9O74700 87 aa8.38□□□□□ -1.07
RPD3YNL330C ATP4P05626 244 aa8.38□□□□□ -1.07
RPD3YNL330C GAL3P13045 520 aa8.38□□□□□ -1.07
RPD3YNL330C POL30P15873 258 aaKnown RBP8.38□□□□□ -1.07
RPD3YNL330C MEI5P32489 222 aa8.38□□□□□ -1.07
RPD3YNL330C PRP18P33411 251 aaPredicted RBP8.38□□□□□ -1.07
RPD3YNL330C VPS21P36017 210 aaKnown RBP8.38□□□□□ -1.07
RPD3YNL330C RCN1P36054 211 aa8.38□□□□□ -1.07
RPD3YNL330C ALY1P36117 915 aa8.38□□□□□ -1.07
RPD3YNL330C GLG1P36143 616 aa8.38□□□□□ -1.07
RPD3YNL330C JLP2P40206 208 aa8.38□□□□□ -1.07
RPD3YNL330C UTP18P40362 594 aaPredicted RBP8.38□□□□□ -1.07
RPD3YNL330C RPL34BP40525 121 aaKnown RBP8.38□□□□□ -1.07
RPD3YNL330C GYP8P43570 497 aa8.38□□□□□ -1.07
RPD3YNL330C EFM3P47163 339 aa8.38□□□□□ -1.07
RPD3YNL330C COG5P53951 403 aa8.38□□□□□ -1.07
RPD3YNL330C EMI1Q04406 187 aa8.38□□□□□ -1.07
RPD3YNL330C RAD34Q06665 692 aa8.38□□□□□ -1.07
RPD3YNL330C IRC10Q08118 586 aa8.38□□□□□ -1.07
RPD3YNL330C FLC1Q08967 793 aa8.38□□□□□ -1.07
RPD3YNL330C TGL5Q12043 749 aa8.38□□□□□ -1.07
RPD3YNL330C MED2Q12124 431 aa8.38□□□□□ -1.07
RPD3YNL330C RPN5Q12250 445 aaKnown RBP8.38□□□□□ -1.07
RPD3YNL330C GLE1Q12315 538 aa8.38□□□□□ -1.07
RPD3YNL330C GTT2Q12390 233 aa8.38□□□□□ -1.07
RPD3YNL330C SNF8Q12483 233 aa8.38□□□□□ -1.07
RPD3YNL330C YCL012CQ8J0M4 134 aa8.38□□□□□ -1.07
RPD3YNL330C Q0010Q9ZZX9 128 aa8.38□□□□□ -1.07
RPD3YNL330C PRI2P20457 528 aa8.37□□□□□ -1.07
RPD3YNL330C LIP5P32875 414 aa8.37□□□□□ -1.07
RPD3YNL330C GCS1P35197 352 aa8.37□□□□□ -1.07
RPD3YNL330C PHO11P35842 467 aa8.37□□□□□ -1.07
RPD3YNL330C UIP5P36137 443 aa8.37□□□□□ -1.07
RPD3YNL330C PHO12P38693 467 aa8.37□□□□□ -1.07
RPD3YNL330C MNN9P39107 395 aaKnown RBP8.37□□□□□ -1.07
RPD3YNL330C PAN6P40459 309 aa8.37□□□□□ -1.07
RPD3YNL330C ARF3P40994 183 aaRIP-Chip data8.37□□□□□ -1.07 RIP-Chip
RPD3YNL330C GLG2P47011 380 aa8.37□□□□□ -1.07
RPD3YNL330C AIM23P47015 356 aa8.37□□□□□ -1.07
RPD3YNL330C PSP1P50896 841 aaKnown RBP8.37□□□□□ -1.07
RPD3YNL330C AIM14P53109 570 aa8.37□□□□□ -1.07
RPD3YNL330C DAM1P53267 343 aa8.37□□□□□ -1.07
RPD3YNL330C MUS81Q04149 632 aaPredicted RBP8.37□□□□□ -1.07
RPD3YNL330C MGR3Q04472 501 aa8.37□□□□□ -1.07
RPD3YNL330C YPR114WQ06107 315 aa8.37□□□□□ -1.07
RPD3YNL330C HBT1Q07653 1046 aaKnown RBP8.37□□□□□ -1.07
RPD3YNL330C YOL131WQ08270 108 aa8.37□□□□□ -1.07
RPD3YNL330C YOR387CQ08910 206 aa8.37□□□□□ -1.07
RPD3YNL330C YDL199CQ12407 687 aa8.37□□□□□ -1.07
RPD3YNL330C YPL119C-AQ3E751 87 aa8.37□□□□□ -1.07
RPD3YNL330C CDC21P06785 304 aa8.36□□□□□ -1.07
RPD3YNL330C MTF1P14908 341 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms