RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC2	YNL272C	SPS19	P32573	292 aa	Known RBP	3.99	□□□□□ -1.77
SEC2	YNL272C	PRP18	P33411	251 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC2	YNL272C	ASK1	P35734	292 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	RRN3	P36070	627 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	SRP72	P38688	640 aa	Known RBP	3.99	□□□□□ -1.77
SEC2	YNL272C	PCL5	P38794	229 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	LIN1	P38852	340 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC2	YNL272C	YHR182W	P38870	785 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	TIM17	P39515	158 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	RPH1	P39956	796 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	IRC24	P40580	263 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	PFA3	P42836	336 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	YJL107C	P42947	387 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	LIA1	P47120	325 aa	Known RBP	3.99	□□□□□ -1.77
SEC2	YNL272C	ASI2	P53895	289 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	OSH6	Q02201	448 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	HPT1	Q04178	221 aa	Known RBP	3.99	□□□□□ -1.77
SEC2	YNL272C	GUP2	Q08929	609 aa		3.99	□□□□□ -1.77
SEC2	YNL272C	SEC53	P07283	254 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	SPT15	P13393	240 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	CTS1	P29029	562 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	CCR4	P31384	837 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	RML2	P32611	393 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	BEM3	P32873	1128 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	STB6	P36085	766 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	SET3	P36124	751 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	YSW1	P38280	609 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	PHO89	P38361	574 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	STN1	P38960	494 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	CIN4	P39110	191 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	PFK26	P40433	827 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	IME4	P41833	600 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	NUP84	P52891	726 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	SWC4	P53201	476 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	LSC1	P53598	329 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	YDR131C	Q03899	556 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	HEL2	Q05580	639 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	TGL5	Q12043	749 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	SMF3	Q12078	473 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	MRH1	Q12117	320 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	UBX3	Q12229	455 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
SEC2	YNL272C	ABF1	P14164	731 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	APA1	P16550	321 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	EPT1	P22140	391 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	AMD2	P22580	549 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	MF(ALPHA)2	P32435	120 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	FAR3	P46671	204 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	BUL1	P48524	976 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	MNN10	P50108	393 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	BOL2	P53082	120 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	GPG1	P53130	126 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	YMR155W	Q03795	547 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	TAF11	Q04226	346 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	EMI1	Q04406	187 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	YML053C	Q04978	212 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	VTA1	Q06263	330 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	THI73	Q07904	523 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	BUD7	Q08754	746 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	SAM4	Q08985	325 aa	Known RBP	3.98	□□□□□ -1.77
SEC2	YNL272C	APC9	Q12107	265 aa		3.98	□□□□□ -1.77
SEC2	YNL272C	YKR104W	P0CE69	306 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	YMR085W	P0CF18	432 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	TRX2	P22803	104 aa	Known RBP	3.97	□□□□□ -1.77
SEC2	YNL272C	PHA2	P32452	334 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	PTM1	P32857	523 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	YBR032W	P38223	100 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	EFM1	P38732	585 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
SEC2	YNL272C	HAT2	P39984	401 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	YJR061W	P40355	935 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	TRS85	P46944	698 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	BNA2	P47125	453 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	PHO23	P50947	330 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	PAN2	P53010	1115 aa	Predicted RBP	3.97	□□□□□ -1.77
SEC2	YNL272C	TAF12	Q03761	539 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	ARX1	Q03862	593 aa	Known RBP	3.97	□□□□□ -1.77
SEC2	YNL272C	NAG1	Q8TGN9	163 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	CPA1	P07258	411 aa	Known RBP	3.97	□□□□□ -1.77
SEC2	YNL272C	DCG1	P32460	244 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	RIM2	P38127	377 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	YBR062C	P38239	180 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	DBP8	P38719	431 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	MUP3	P38734	546 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	CYC2	P38909	366 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	YDR089W	P38966	869 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	SEC28	P40509	296 aa	Known RBP	3.97	□□□□□ -1.77
SEC2	YNL272C	COQ5	P49017	307 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	SPP2	Q02521	185 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	ARG7	Q04728	441 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	HBT1	Q07653	1046 aa	Known RBP	3.97	□□□□□ -1.77
SEC2	YNL272C	TRM8	Q12009	286 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	MDY2	Q12285	212 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	SWM1	Q12379	170 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	ICT1	Q12385	394 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	SPE4	Q12455	300 aa		3.97	□□□□□ -1.77
SEC2	YNL272C	MSB2	P32334	1306 aa		3.96	□□□□□ -1.77
SEC2	YNL272C	SEM1	O94742	89 aa		3.96	□□□□□ -1.78
SEC2	YNL272C	RPB4	P20433	221 aa	Predicted RBP	3.96	□□□□□ -1.78
SEC2	YNL272C	MSH1	P25846	959 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms