RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W YOL159CQ08300 171 aa5.77□□□□□ -1.49
ATG4YNL223W SRN2Q99176 213 aa5.77□□□□□ -1.49
ATG4YNL223W INH1P01097 85 aa5.76□□□□□ -1.49
ATG4YNL223W RAP1P11938 827 aa5.76□□□□□ -1.49
ATG4YNL223W SGV1P23293 657 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W ERG6P25087 383 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W RVS161P25343 265 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W GBP2P25555 427 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
ATG4YNL223W AAR2P32357 355 aaPredicted RBP5.76□□□□□ -1.49
ATG4YNL223W HXT4P32467 576 aa5.76□□□□□ -1.49
ATG4YNL223W RPT5P33297 434 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W PEX6P33760 1030 aa5.76□□□□□ -1.49
ATG4YNL223W MRP8P35719 219 aa5.76□□□□□ -1.49
ATG4YNL223W EMC3P36039 253 aa5.76□□□□□ -1.49
ATG4YNL223W YKL151CP36059 337 aa5.76□□□□□ -1.49
ATG4YNL223W YCR087C-AP37263 153 aa5.76□□□□□ -1.49
ATG4YNL223W YBR071WP38243 211 aa5.76□□□□□ -1.49
ATG4YNL223W INM1P38710 295 aa5.76□□□□□ -1.49
ATG4YNL223W YPT35P38815 214 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W HXT6P39003 570 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W HXT7P39004 570 aa5.76□□□□□ -1.49
ATG4YNL223W DSS1P39112 969 aa5.76□□□□□ -1.49
ATG4YNL223W GIM4P40005 111 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W GCV1P48015 400 aa5.76□□□□□ -1.49
ATG4YNL223W IDP3P53982 420 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W IRC15Q02733 499 aa5.76□□□□□ -1.49
ATG4YNL223W EFR3Q03653 782 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W RAD33Q04231 177 aa5.76□□□□□ -1.49
ATG4YNL223W YMR034CQ05131 434 aaPredicted RBP5.76□□□□□ -1.49
ATG4YNL223W BSC2Q05611 235 aa5.76□□□□□ -1.49
ATG4YNL223W SAM4Q08985 325 aaKnown RBP5.76□□□□□ -1.49
ATG4YNL223W VPS68Q12016 184 aa5.76□□□□□ -1.49
ATG4YNL223W YDR056CQ12025 205 aa5.76□□□□□ -1.49
ATG4YNL223W YPR011CQ12251 326 aa5.76□□□□□ -1.49
ATG4YNL223W TAF3Q12297 353 aa5.76□□□□□ -1.49
ATG4YNL223W RGT2Q12300 763 aa5.76□□□□□ -1.49
ATG4YNL223W THP2O13539 261 aaKnown RBP5.75□□□□□ -1.49
ATG4YNL223W RAS2P01120 322 aaKnown RBP5.75□□□□□ -1.49
ATG4YNL223W URA4P20051 364 aa5.75□□□□□ -1.49
ATG4YNL223W ATO2P32907 282 aa5.75□□□□□ -1.49
ATG4YNL223W SWH1P35845 1188 aa5.75□□□□□ -1.49
ATG4YNL223W YKR078WP36158 585 aaKnown RBP5.75□□□□□ -1.49
ATG4YNL223W GIC1P38785 314 aa5.75□□□□□ -1.49
ATG4YNL223W BEM4P39011 633 aa5.75□□□□□ -1.49
ATG4YNL223W RGI1P40043 161 aaPredicted RBP5.75□□□□□ -1.49
ATG4YNL223W RIO2P40160 425 aaKnown RBP5.75□□□□□ -1.49
ATG4YNL223W NDE1P40215 560 aa5.75□□□□□ -1.49
ATG4YNL223W GAB1P41733 394 aa5.75□□□□□ -1.49
ATG4YNL223W YFR020WP43600 232 aa5.75□□□□□ -1.49
ATG4YNL223W AIM22P47051 409 aa5.75□□□□□ -1.49
ATG4YNL223W BIR1P47134 954 aa5.75□□□□□ -1.49
ATG4YNL223W UPF3P48412 387 aaKnown RBP5.75□□□□□ -1.49
ATG4YNL223W CAF120P53836 1060 aa5.75□□□□□ -1.49
ATG4YNL223W ASI2P53895 289 aa5.75□□□□□ -1.49
ATG4YNL223W GIP3Q03016 1276 aa5.75□□□□□ -1.49
ATG4YNL223W MET31Q03081 177 aa5.75□□□□□ -1.49
ATG4YNL223W OPI10Q08202 246 aa5.75□□□□□ -1.49
ATG4YNL223W ULA1Q12059 462 aa5.75□□□□□ -1.49
ATG4YNL223W BCY1P07278 416 aaKnown RBP5.74□□□□□ -1.49
ATG4YNL223W KAR1P11927 433 aa5.74□□□□□ -1.49
ATG4YNL223W STE6P12866 1290 aa5.74□□□□□ -1.49
ATG4YNL223W RDS2P19541 446 aaKnown RBP5.74□□□□□ -1.49
ATG4YNL223W PRI2P20457 528 aa5.74□□□□□ -1.49
ATG4YNL223W NUD1P32336 851 aa5.74□□□□□ -1.49
ATG4YNL223W MGM101P32787 269 aaKnown RBP5.74□□□□□ -1.49
ATG4YNL223W UGP1P32861 499 aaKnown RBP5.74□□□□□ -1.49
ATG4YNL223W DEF1P35732 738 aaKnown RBP5.74□□□□□ -1.49
ATG4YNL223W SKG1P36169 355 aa5.74□□□□□ -1.49
ATG4YNL223W PPX1P38698 397 aa5.74□□□□□ -1.49
ATG4YNL223W YHR218WP38899 603 aa5.74□□□□□ -1.49
ATG4YNL223W FAA2P39518 744 aa5.74□□□□□ -1.49
ATG4YNL223W SEC26P41810 973 aaKnown RBP5.74□□□□□ -1.49
ATG4YNL223W FMP32P43557 207 aa5.74□□□□□ -1.49
ATG4YNL223W MET12P46151 657 aa5.74□□□□□ -1.49
ATG4YNL223W KEL2P50090 882 aa5.74□□□□□ -1.49
ATG4YNL223W SNO2P53823 222 aa5.74□□□□□ -1.49
ATG4YNL223W SMA1Q02651 245 aa5.74□□□□□ -1.49
ATG4YNL223W SVL3Q03088 825 aaKnown RBP5.74□□□□□ -1.49
ATG4YNL223W ROT1Q03691 256 aa5.74□□□□□ -1.49
ATG4YNL223W HPF1Q05164 967 aa5.74□□□□□ -1.49
ATG4YNL223W PLB3Q08108 686 aa5.74□□□□□ -1.49
ATG4YNL223W MLH3Q12083 715 aa5.74□□□□□ -1.49
ATG4YNL223W ATG29Q12092 213 aa5.74□□□□□ -1.49
ATG4YNL223W RPN6Q12377 434 aa5.74□□□□□ -1.49
ATG4YNL223W NAG1Q8TGN9 163 aa5.74□□□□□ -1.49
ATG4YNL223W LEU4P06208 619 aaKnown RBP5.73□□□□□ -1.49
ATG4YNL223W POL30P15873 258 aaKnown RBP5.73□□□□□ -1.49
ATG4YNL223W YBR241CP38142 488 aa5.73□□□□□ -1.49
ATG4YNL223W SLM4P38247 162 aa5.73□□□□□ -1.49
ATG4YNL223W COS111P38308 924 aa5.73□□□□□ -1.49
ATG4YNL223W HXT5P38695 592 aa5.73□□□□□ -1.49
ATG4YNL223W ATG7P38862 630 aa5.73□□□□□ -1.49
ATG4YNL223W GGC1P38988 300 aa5.73□□□□□ -1.49
ATG4YNL223W MTW1P39731 289 aa5.73□□□□□ -1.49
ATG4YNL223W GVP36P40531 326 aaKnown RBP5.73□□□□□ -1.49
ATG4YNL223W COS12P53053 380 aa5.73□□□□□ -1.49
ATG4YNL223W YNL140CP53910 189 aa5.73□□□□□ -1.49
ATG4YNL223W SKI8Q02793 397 aaPredicted RBP5.73□□□□□ -1.49
ATG4YNL223W YMR010WQ03687 405 aa5.73□□□□□ -1.49
ATG4YNL223W YOL131WQ08270 108 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms