RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W CFT2Q12102 859 aaPredicted RBP3.22□□□□□ -1.89
SRP1YNL189W RAV1P47104 1357 aa3.22□□□□□ -1.89
SRP1YNL189W UTR4P32626 227 aa3.21□□□□□ -1.9
SRP1YNL189W NPL6P32832 435 aa3.21□□□□□ -1.9
SRP1YNL189W GCS1P35197 352 aa3.21□□□□□ -1.9
SRP1YNL189W BYE1P36106 594 aa3.21□□□□□ -1.9
SRP1YNL189W CSM2P40465 213 aa3.21□□□□□ -1.9
SRP1YNL189W CUL3P53202 744 aa3.21□□□□□ -1.9
SRP1YNL189W BNA5Q05979 453 aa3.21□□□□□ -1.9
SRP1YNL189W SPB1P25582 841 aaPredicted RBP3.2□□□□□ -1.9
SRP1YNL189W THI2P38141 450 aa3.2□□□□□ -1.9
SRP1YNL189W VTC2P43585 828 aa3.2□□□□□ -1.9
SRP1YNL189W ARX1Q03862 593 aaKnown RBP3.2□□□□□ -1.9
SRP1YNL189W YEH2Q07950 538 aa3.2□□□□□ -1.9
SRP1YNL189W SIL1Q08199 421 aa3.2□□□□□ -1.9
SRP1YNL189W ISN1Q99312 450 aa3.2□□□□□ -1.9
SRP1YNL189W GLK1P17709 500 aaKnown RBP3.19□□□□□ -1.9
SRP1YNL189W YCR007CP25354 239 aa3.19□□□□□ -1.9
SRP1YNL189W FUN19P28003 413 aaPredicted RBP3.19□□□□□ -1.9
SRP1YNL189W YIM1P28625 365 aa3.19□□□□□ -1.9
SRP1YNL189W MEP2P41948 499 aa3.19□□□□□ -1.9
SRP1YNL189W YGR149WP48236 432 aa3.19□□□□□ -1.9
SRP1YNL189W KEL3Q08979 651 aaPredicted RBP3.19□□□□□ -1.9
SRP1YNL189W IDH2P28241 369 aaKnown RBP3.19□□□□□ -1.9
SRP1YNL189W AFG1P32317 509 aa3.19□□□□□ -1.9
SRP1YNL189W POP1P41812 875 aa3.19□□□□□ -1.9
SRP1YNL189W DIM1P41819 318 aaKnown RBP3.19□□□□□ -1.9
SRP1YNL189W OCA1P50946 238 aaPredicted RBP3.19□□□□□ -1.9
SRP1YNL189W RPM2Q02773 1202 aa3.19□□□□□ -1.9
SRP1YNL189W YMR317WQ04893 1140 aa3.19□□□□□ -1.9
SRP1YNL189W MRPL51Q06090 140 aaPredicted RBP3.19□□□□□ -1.9
SRP1YNL189W GRS2Q06817 618 aa3.19□□□□□ -1.9
SRP1YNL189W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
SRP1YNL189W RPL15AP05748 204 aaKnown RBP3.18□□□□□ -1.9
SRP1YNL189W ATP10P18496 279 aa3.18□□□□□ -1.9
SRP1YNL189W NDC1P32500 655 aa3.18□□□□□ -1.9
SRP1YNL189W NFU1P32860 256 aa3.18□□□□□ -1.9
SRP1YNL189W TUL1P36096 758 aa3.18□□□□□ -1.9
SRP1YNL189W RRP3P38712 501 aaKnown RBP3.18□□□□□ -1.9
SRP1YNL189W YTA12P40341 825 aa3.18□□□□□ -1.9
SRP1YNL189W RPR2P40571 144 aa3.18□□□□□ -1.9
SRP1YNL189W SCS3P53012 380 aa3.18□□□□□ -1.9
SRP1YNL189W YGL082WP53155 381 aa3.18□□□□□ -1.9
SRP1YNL189W GPI1P53306 609 aa3.18□□□□□ -1.9
SRP1YNL189W YDR131CQ03899 556 aa3.18□□□□□ -1.9
SRP1YNL189W TIP41Q12199 356 aa3.18□□□□□ -1.9
SRP1YNL189W YDL009CQ12210 107 aa3.18□□□□□ -1.9
SRP1YNL189W RPC53P25441 422 aa3.17□□□□□ -1.9
SRP1YNL189W BUB3P26449 341 aa3.17□□□□□ -1.9
SRP1YNL189W RAD14P28519 371 aa3.17□□□□□ -1.9
SRP1YNL189W RML2P32611 393 aa3.17□□□□□ -1.9
SRP1YNL189W LOS1P33418 1100 aaPredicted RBP3.17□□□□□ -1.9
SRP1YNL189W MTC4P38335 694 aaKnown RBP3.17□□□□□ -1.9
SRP1YNL189W YJL070CP40361 888 aa3.17□□□□□ -1.9
SRP1YNL189W DLD2P46681 530 aaKnown RBP3.17□□□□□ -1.9
SRP1YNL189W BNI5P53890 448 aaKnown RBP3.17□□□□□ -1.9
SRP1YNL189W HCR1Q05775 265 aaKnown RBP3.17□□□□□ -1.9
SRP1YNL189W YMR230W-AQ3E7B5 62 aa3.17□□□□□ -1.9
SRP1YNL189W YRF1-4O13559 1382 aa3.16□□□□□ -1.9
SRP1YNL189W CLB3P24870 427 aa3.16□□□□□ -1.9
SRP1YNL189W SNT1P25357 1226 aa3.16□□□□□ -1.9
SRP1YNL189W PTR2P32901 601 aa3.16□□□□□ -1.9
SRP1YNL189W HAT2P39984 401 aa3.16□□□□□ -1.9
SRP1YNL189W YAT2P40017 923 aa3.16□□□□□ -1.9
SRP1YNL189W YFR016CP43597 1233 aaKnown RBP3.16□□□□□ -1.9
SRP1YNL189W RTT101P47050 842 aa3.16□□□□□ -1.9
SRP1YNL189W AYT1Q12226 474 aa3.16□□□□□ -1.9
SRP1YNL189W LSP1Q12230 341 aaKnown RBP3.16□□□□□ -1.9
SRP1YNL189W SFI1Q12369 946 aa3.16□□□□□ -1.9
SRP1YNL189W CAR1P00812 333 aaKnown RBP3.15□□□□□ -1.9
SRP1YNL189W ADK2P26364 225 aa3.15□□□□□ -1.9
SRP1YNL189W SPC110P32380 944 aa3.15□□□□□ -1.9
SRP1YNL189W YNK1P36010 153 aaKnown RBP3.15□□□□□ -1.9
SRP1YNL189W STB6P36085 766 aa3.15□□□□□ -1.9
SRP1YNL189W OTU2P38747 307 aaKnown RBP3.15□□□□□ -1.9
SRP1YNL189W DHH1P39517 506 aaKnown RBP3.15□□□□□ -1.9
SRP1YNL189W MNP1P53163 194 aaPredicted RBP3.15□□□□□ -1.9
SRP1YNL189W ARK1P53974 638 aa3.15□□□□□ -1.9
SRP1YNL189W IRC15Q02733 499 aa3.15□□□□□ -1.9
SRP1YNL189W SPC19Q03954 165 aa3.15□□□□□ -1.9
SRP1YNL189W HEM2P05373 342 aa3.15□□□□□ -1.91
SRP1YNL189W YML002WP0CF17 737 aa3.15□□□□□ -1.91
SRP1YNL189W FMP46P36141 133 aaKnown RBP3.15□□□□□ -1.91
SRP1YNL189W RPH1P39956 796 aa3.15□□□□□ -1.91
SRP1YNL189W FAU1P40099 211 aa3.15□□□□□ -1.91
SRP1YNL189W GWT1P47026 490 aa3.15□□□□□ -1.91
SRP1YNL189W YGL260WP53056 76 aa3.15□□□□□ -1.91
SRP1YNL189W ROY1Q04847 553 aa3.15□□□□□ -1.91
SRP1YNL189W YLR345WQ06137 509 aa3.15□□□□□ -1.91
SRP1YNL189W VTA1Q06263 330 aa3.15□□□□□ -1.91
SRP1YNL189W RHO2P06781 192 aa3.14□□□□□ -1.91
SRP1YNL189W PDX1P16451 410 aa3.14□□□□□ -1.91
SRP1YNL189W YCR051WP25631 222 aa3.14□□□□□ -1.91
SRP1YNL189W ERV1P27882 189 aa3.14□□□□□ -1.91
SRP1YNL189W NIP100P33420 868 aa3.14□□□□□ -1.91
SRP1YNL189W FRE2P36033 711 aa3.14□□□□□ -1.91
SRP1YNL189W KRE9P39005 276 aa3.14□□□□□ -1.91
SRP1YNL189W CCT2P39076 527 aaKnown RBP3.14□□□□□ -1.91
SRP1YNL189W SHO1P40073 367 aa3.14□□□□□ -1.91
SRP1YNL189W TFG2P41896 400 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms