RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W TOM22P49334 152 aa3.91□□□□□ -1.78
PUB1YNL016W PAN2P53010 1115 aaPredicted RBP3.91□□□□□ -1.78
PUB1YNL016W RPS15Q01855 142 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W IRC10Q08118 586 aa3.91□□□□□ -1.78
PUB1YNL016W FMP40Q08968 688 aaPredicted RBP3.91□□□□□ -1.78
PUB1YNL016W YBR255C-AQ3E776 120 aa3.91□□□□□ -1.78
PUB1YNL016W FKS1P38631 1876 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W RPB4P20433 221 aaPredicted RBP3.9□□□□□ -1.78
PUB1YNL016W UBA1P22515 1024 aaKnown RBP3.9□□□□□ -1.78
PUB1YNL016W SPS22P25380 463 aa3.9□□□□□ -1.78
PUB1YNL016W NDI1P32340 513 aa3.9□□□□□ -1.78
PUB1YNL016W DPH5P32469 300 aaPredicted RBP3.9□□□□□ -1.78
PUB1YNL016W DSS4P32601 143 aa3.9□□□□□ -1.78
PUB1YNL016W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
PUB1YNL016W MYO3P36006 1272 aa3.9□□□□□ -1.78
PUB1YNL016W SLX1P38324 304 aa3.9□□□□□ -1.78
PUB1YNL016W LIN1P38852 340 aaPredicted RBP3.9□□□□□ -1.78
PUB1YNL016W MNN9P39107 395 aaKnown RBP3.9□□□□□ -1.78
PUB1YNL016W YMR124WP39523 943 aaKnown RBP3.9□□□□□ -1.78
PUB1YNL016W SSO2P39926 295 aa3.9□□□□□ -1.78
PUB1YNL016W ALG5P40350 334 aa3.9□□□□□ -1.78
PUB1YNL016W MND2P40577 368 aa3.9□□□□□ -1.78
PUB1YNL016W IMD4P50094 524 aaKnown RBP3.9□□□□□ -1.78
PUB1YNL016W YNL144CP53907 740 aa3.9□□□□□ -1.78
PUB1YNL016W SKO1Q02100 647 aa3.9□□□□□ -1.78
PUB1YNL016W ACL4Q03771 387 aa3.9□□□□□ -1.78
PUB1YNL016W SEG1Q04279 960 aa3.9□□□□□ -1.78
PUB1YNL016W HOF1Q05080 669 aa3.9□□□□□ -1.78
PUB1YNL016W SMD2Q06217 110 aaKnown RBP3.9□□□□□ -1.78
PUB1YNL016W WHI4Q07655 649 aaKnown RBP3.9□□□□□ -1.78
PUB1YNL016W FRE3Q08905 711 aa3.9□□□□□ -1.78
PUB1YNL016W RLM1Q12224 676 aa3.9□□□□□ -1.78
PUB1YNL016W YDR061WQ12298 539 aa3.9□□□□□ -1.78
PUB1YNL016W MF(ALPHA)1P01149 165 aa3.89□□□□□ -1.79
PUB1YNL016W PDA1P16387 420 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W PEX1P24004 1043 aa3.89□□□□□ -1.79
PUB1YNL016W CDC15P27636 974 aa3.89□□□□□ -1.79
PUB1YNL016W YME1P32795 747 aa3.89□□□□□ -1.79
PUB1YNL016W TIF3P34167 436 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W YBL055CP34220 418 aaPredicted RBP3.89□□□□□ -1.79
PUB1YNL016W TUL1P36096 758 aa3.89□□□□□ -1.79
PUB1YNL016W RPC37P36121 282 aa3.89□□□□□ -1.79
PUB1YNL016W GLG1P36143 616 aa3.89□□□□□ -1.79
PUB1YNL016W DRE2P36152 348 aa3.89□□□□□ -1.79
PUB1YNL016W ATP3P38077 311 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W ELO3P40319 345 aa3.89□□□□□ -1.79
PUB1YNL016W ULP2P40537 1034 aaPredicted RBP3.89□□□□□ -1.79
PUB1YNL016W SAD1P43589 448 aa3.89□□□□□ -1.79
PUB1YNL016W RPA34P47006 233 aaPredicted RBP3.89□□□□□ -1.79
PUB1YNL016W YJL132WP47014 750 aa3.89□□□□□ -1.79
PUB1YNL016W YGR149WP48236 432 aa3.89□□□□□ -1.79
PUB1YNL016W RMD9P53140 646 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W UTP6Q02354 440 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W SMA1Q02651 245 aa3.89□□□□□ -1.79
PUB1YNL016W USA1Q03714 838 aa3.89□□□□□ -1.79
PUB1YNL016W RRB1Q04225 511 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W BOP2Q06150 570 aa3.89□□□□□ -1.79
PUB1YNL016W PIG1Q06216 648 aa3.89□□□□□ -1.79
PUB1YNL016W CUR1Q06469 252 aa3.89□□□□□ -1.79
PUB1YNL016W YLR413WQ06689 675 aa3.89□□□□□ -1.79
PUB1YNL016W SFG1Q12507 346 aa3.89□□□□□ -1.79
PUB1YNL016W RIF1P29539 1916 aa3.89□□□□□ -1.79
PUB1YNL016W IRA2P19158 3079 aa3.89□□□□□ -1.79
PUB1YNL016W RPL40AP0CH08 128 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W RPL40BP0CH09 128 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W SRP54P20424 541 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W RDS1P25611 832 aa3.89□□□□□ -1.79
PUB1YNL016W MSS51P32335 436 aa3.89□□□□□ -1.79
PUB1YNL016W DOA4P32571 926 aa3.89□□□□□ -1.79
PUB1YNL016W TPO5P36029 618 aa3.89□□□□□ -1.79
PUB1YNL016W MMS4P38257 691 aa3.89□□□□□ -1.79
PUB1YNL016W MSS4P38994 779 aa3.89□□□□□ -1.79
PUB1YNL016W IAH1P41734 238 aa3.89□□□□□ -1.79
PUB1YNL016W IMO32P53219 342 aa3.89□□□□□ -1.79
PUB1YNL016W MRPS35P53292 345 aa3.89□□□□□ -1.79
PUB1YNL016W SPC98P53540 846 aa3.89□□□□□ -1.79
PUB1YNL016W COP1P53622 1201 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W TEX1P53851 422 aaKnown RBP3.89□□□□□ -1.79
PUB1YNL016W RSM24Q03976 319 aa3.89□□□□□ -1.79
PUB1YNL016W YLR455WQ06188 304 aa3.89□□□□□ -1.79
PUB1YNL016W YFT2Q06676 274 aa3.89□□□□□ -1.79
PUB1YNL016W FRE5Q08908 694 aa3.89□□□□□ -1.79
PUB1YNL016W NDJ1Q12366 352 aa3.89□□□□□ -1.79
PUB1YNL016W TAD3Q9URQ3 322 aa3.89□□□□□ -1.79
PUB1YNL016W CCH1P50077 2039 aa3.88□□□□□ -1.79
PUB1YNL016W VPS63O13549 108 aa3.88□□□□□ -1.79
PUB1YNL016W CDC37P06101 506 aaKnown RBP3.88□□□□□ -1.79
PUB1YNL016W ILV5P06168 395 aaKnown RBP3.88□□□□□ -1.79
PUB1YNL016W ILV2P07342 687 aaKnown RBP3.88□□□□□ -1.79
PUB1YNL016W SPO7P18410 259 aa3.88□□□□□ -1.79
PUB1YNL016W CLN1P20437 546 aa3.88□□□□□ -1.79
PUB1YNL016W PDE1P22434 369 aa3.88□□□□□ -1.79
PUB1YNL016W VMA16P23968 213 aa3.88□□□□□ -1.79
PUB1YNL016W PET18P25362 215 aa3.88□□□□□ -1.79
PUB1YNL016W EFB1P32471 206 aaKnown RBP3.88□□□□□ -1.79
PUB1YNL016W AIM26P32858 118 aa3.88□□□□□ -1.79
PUB1YNL016W UGP1P32861 499 aaKnown RBP3.88□□□□□ -1.79
PUB1YNL016W MNN2P38069 597 aa3.88□□□□□ -1.79
PUB1YNL016W PEX7P39108 375 aa3.88□□□□□ -1.79
PUB1YNL016W AIM10P39965 576 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms