RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C YMR085WP0CF18 432 aa2.42□□□□□ -2.02
SGS1YMR190C GCY1P14065 312 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SGS1YMR190C ARF2P19146 181 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C EXO70P19658 623 aa2.42□□□□□ -2.02
SGS1YMR190C PHO87P25360 923 aa2.42□□□□□ -2.02
SGS1YMR190C UTR2P32623 467 aa2.42□□□□□ -2.02
SGS1YMR190C SIP2P34164 415 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C HSL7P38274 827 aa2.42□□□□□ -2.02
SGS1YMR190C TSC10P38342 320 aa2.42□□□□□ -2.02
SGS1YMR190C YHL012WP38709 493 aa2.42□□□□□ -2.02
SGS1YMR190C FSH1P38777 243 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C MNN1P39106 762 aa2.42□□□□□ -2.02
SGS1YMR190C RPT2P40327 437 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C TRM9P49957 279 aa2.42□□□□□ -2.02
SGS1YMR190C IPI3P53877 555 aa2.42□□□□□ -2.02
SGS1YMR190C KTR5P53966 522 aaPredicted RBP2.42□□□□□ -2.02
SGS1YMR190C SED5Q01590 340 aa2.42□□□□□ -2.02
SGS1YMR190C TFB2Q02939 513 aa2.42□□□□□ -2.02
SGS1YMR190C MTQ2Q03920 221 aaPredicted RBP2.42□□□□□ -2.02
SGS1YMR190C HEL2Q05580 639 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C NRT1Q08485 598 aa2.42□□□□□ -2.02
SGS1YMR190C SNX3Q08826 162 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C NAG1Q8TGN9 163 aa2.42□□□□□ -2.02
SGS1YMR190C ILV5P06168 395 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C SSC1P0CS90 654 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C GCD2P12754 651 aaPredicted RBP2.42□□□□□ -2.02
SGS1YMR190C NMT1P14743 455 aa2.42□□□□□ -2.02
SGS1YMR190C HOP1P20050 605 aa2.42□□□□□ -2.02
SGS1YMR190C PHA2P32452 334 aa2.42□□□□□ -2.02
SGS1YMR190C CYS4P32582 507 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C YSC84P32793 468 aa2.42□□□□□ -2.02
SGS1YMR190C GDT1P38301 280 aaPredicted RBP2.42□□□□□ -2.02
SGS1YMR190C DIA4P38705 446 aaPredicted RBP2.42□□□□□ -2.02
SGS1YMR190C YHR020WP38708 688 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C HOS4P40480 1083 aa2.42□□□□□ -2.02
SGS1YMR190C MAD2P40958 196 aa2.42□□□□□ -2.02
SGS1YMR190C YFL012WP43580 148 aa2.42□□□□□ -2.02
SGS1YMR190C YFR020WP43600 232 aa2.42□□□□□ -2.02
SGS1YMR190C PET130P47065 347 aa2.42□□□□□ -2.02
SGS1YMR190C RRP45Q05636 305 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C YET3Q07451 203 aa2.42□□□□□ -2.02
SGS1YMR190C YLR046CQ12253 270 aa2.42□□□□□ -2.02
SGS1YMR190C PRB1P09232 635 aa2.42□□□□□ -2.02
SGS1YMR190C YSP3P25036 478 aa2.42□□□□□ -2.02
SGS1YMR190C RFC3P38629 340 aa2.42□□□□□ -2.02
SGS1YMR190C ELO3P40319 345 aa2.42□□□□□ -2.02
SGS1YMR190C MNT3P40549 630 aa2.42□□□□□ -2.02
SGS1YMR190C ADO1P47143 340 aaKnown RBP2.42□□□□□ -2.02
SGS1YMR190C PET117Q02771 107 aa2.42□□□□□ -2.02
SGS1YMR190C YDR131CQ03899 556 aa2.42□□□□□ -2.02
SGS1YMR190C ARA2Q04212 335 aa2.42□□□□□ -2.02
SGS1YMR190C TRM12Q04235 462 aa2.42□□□□□ -2.02
SGS1YMR190C TEN1Q07921 160 aa2.42□□□□□ -2.02
SGS1YMR190C PEX15Q08215 383 aa2.42□□□□□ -2.02
SGS1YMR190C ATG29Q12092 213 aa2.42□□□□□ -2.02
SGS1YMR190C HOP09932 586 aa2.41□□□□□ -2.02
SGS1YMR190C HSC82P15108 705 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C ARG1P22768 420 aa2.41□□□□□ -2.02
SGS1YMR190C FUN30P31380 1131 aa2.41□□□□□ -2.02
SGS1YMR190C RIM1P32445 135 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C YFL054CP43549 646 aa2.41□□□□□ -2.02
SGS1YMR190C RGD2P43556 714 aa2.41□□□□□ -2.02
SGS1YMR190C STR3P53101 465 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C LCL3P53153 274 aa2.41□□□□□ -2.02
SGS1YMR190C OSH6Q02201 448 aa2.41□□□□□ -2.02
SGS1YMR190C RSC2Q06488 889 aa2.41□□□□□ -2.02
SGS1YMR190C GYP1Q08484 637 aa2.41□□□□□ -2.02
SGS1YMR190C TMA46Q12000 345 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C MRH1Q12117 320 aaPredicted RBP2.41□□□□□ -2.02
SGS1YMR190C YPT6Q99260 215 aa2.41□□□□□ -2.02
SGS1YMR190C HEM2P05373 342 aa2.41□□□□□ -2.02
SGS1YMR190C LEU4P06208 619 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C RPL35AP0CX84 120 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C RPL35BP0CX85 120 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C MRPL25P23369 157 aa2.41□□□□□ -2.02
SGS1YMR190C GEX1P25596 615 aa2.41□□□□□ -2.02
SGS1YMR190C ARC19P33204 171 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C LRG1P35688 1017 aa2.41□□□□□ -2.02
SGS1YMR190C TEF4P36008 412 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C GEX2P36173 615 aa2.41□□□□□ -2.02
SGS1YMR190C ASC1P38011 319 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C RIX1P38883 763 aaPredicted RBP2.41□□□□□ -2.02
SGS1YMR190C SEC28P40509 296 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C GLG2P47011 380 aa2.41□□□□□ -2.02
SGS1YMR190C GOR1P53839 350 aa2.41□□□□□ -2.02
SGS1YMR190C PIR3Q03180 325 aa2.41□□□□□ -2.02
SGS1YMR190C SPC24Q04477 213 aa2.41□□□□□ -2.02
SGS1YMR190C YPR172WQ06608 200 aa2.41□□□□□ -2.02
SGS1YMR190C ATG10Q07879 167 aa2.41□□□□□ -2.02
SGS1YMR190C YOR238WQ08634 303 aa2.41□□□□□ -2.02
SGS1YMR190C VPS13Q07878 3144 aa2.41□□□□□ -2.02
SGS1YMR190C ACO1P19414 778 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SGS1YMR190C RPB4P20433 221 aaPredicted RBP2.41□□□□□ -2.02
SGS1YMR190C PRO1P32264 428 aa2.41□□□□□ -2.02
SGS1YMR190C MF(ALPHA)2P32435 120 aa2.41□□□□□ -2.02
SGS1YMR190C NIC96P34077 839 aa2.41□□□□□ -2.02
SGS1YMR190C FMP23P38231 175 aa2.41□□□□□ -2.02
SGS1YMR190C TIM17P39515 158 aa2.41□□□□□ -2.02
SGS1YMR190C YHB1P39676 399 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C MDJ2P42834 146 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms