RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C PMT1P33775 817 aa1.32□□□□□ -2.2
IFH1YLR223C YOX1P34161 385 aa1.32□□□□□ -2.2
IFH1YLR223C MBB1P39534 108 aa1.32□□□□□ -2.2
IFH1YLR223C ERP2P39704 215 aa1.32□□□□□ -2.2
IFH1YLR223C ISC1P40015 477 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C HEF3P53978 1044 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C PAL1Q05518 499 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C SYO1Q07395 620 aa1.32□□□□□ -2.2
IFH1YLR223C CFT2Q12102 859 aaPredicted RBP1.32□□□□□ -2.2
IFH1YLR223C YDL009CQ12210 107 aa1.32□□□□□ -2.2
IFH1YLR223C HEM2P05373 342 aa1.32□□□□□ -2.2
IFH1YLR223C YCR022CP25620 114 aa1.32□□□□□ -2.2
IFH1YLR223C DUG2P38149 878 aa1.32□□□□□ -2.2
IFH1YLR223C YEL057CP39983 233 aa1.32□□□□□ -2.2
IFH1YLR223C YJL132WP47014 750 aa1.32□□□□□ -2.2
IFH1YLR223C ARE2P53629 642 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C PIR3Q03180 325 aa1.32□□□□□ -2.2
IFH1YLR223C VPS74Q06385 345 aa1.32□□□□□ -2.2
IFH1YLR223C TSR2Q06672 205 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C MRS3P10566 314 aa1.32□□□□□ -2.2
IFH1YLR223C HSC82P15108 705 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C WBP1P33767 430 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C FRE2P36033 711 aa1.32□□□□□ -2.2
IFH1YLR223C RBS1Q05672 457 aaKnown RBP1.32□□□□□ -2.2
IFH1YLR223C YOR365CQ08844 703 aa1.32□□□□□ -2.2
IFH1YLR223C YPL272CQ08984 517 aa1.32□□□□□ -2.2
IFH1YLR223C ATG29Q12092 213 aa1.32□□□□□ -2.2
IFH1YLR223C NCE102Q12207 173 aaRIP-Chip data1.32□□□□□ -2.2not detected
IFH1YLR223C FUN19P28003 413 aaPredicted RBP1.31□□□□□ -2.2
IFH1YLR223C ADD37Q03233 198 aa1.31□□□□□ -2.2
IFH1YLR223C VPS72Q03388 795 aa1.31□□□□□ -2.2
IFH1YLR223C COG4Q06096 861 aa1.31□□□□□ -2.2
IFH1YLR223C SIL1Q08199 421 aa1.31□□□□□ -2.2
IFH1YLR223C RKM5Q12367 367 aa1.31□□□□□ -2.2
IFH1YLR223C YBR298C-AQ8TGK4 73 aa1.31□□□□□ -2.2
IFH1YLR223C LEU4P06208 619 aaKnown RBP1.31□□□□□ -2.2
IFH1YLR223C YAR066WP0CX18 203 aa1.31□□□□□ -2.2
IFH1YLR223C YHR214WP0CX19 203 aa1.31□□□□□ -2.2
IFH1YLR223C RED1P14291 827 aa1.31□□□□□ -2.2
IFH1YLR223C PRP2P20095 876 aaPredicted RBP1.31□□□□□ -2.2
IFH1YLR223C PRD1P25375 712 aa1.31□□□□□ -2.2
IFH1YLR223C UTR4P32626 227 aa1.31□□□□□ -2.2
IFH1YLR223C MRP4P32902 394 aa1.31□□□□□ -2.2
IFH1YLR223C VID24P38263 362 aa1.31□□□□□ -2.2
IFH1YLR223C KEL1P38853 1164 aaKnown RBP1.31□□□□□ -2.2
IFH1YLR223C HXT14P42833 540 aa1.31□□□□□ -2.2
IFH1YLR223C GWT1P47026 490 aa1.31□□□□□ -2.2
IFH1YLR223C YJR154WP47181 346 aa1.31□□□□□ -2.2
IFH1YLR223C YGR149WP48236 432 aa1.31□□□□□ -2.2
IFH1YLR223C MNP1P53163 194 aaPredicted RBP1.31□□□□□ -2.2
IFH1YLR223C TWF1P53250 332 aa1.31□□□□□ -2.2
IFH1YLR223C DRN1P53255 507 aaKnown RBP1.31□□□□□ -2.2
IFH1YLR223C GOR1P53839 350 aa1.31□□□□□ -2.2
IFH1YLR223C YDL007C-AQ2V2Q0 85 aa1.31□□□□□ -2.2
IFH1YLR223C SAM1P10659 382 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C SAM2P19358 384 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C YCR007CP25354 239 aa1.3□□□□□ -2.2
IFH1YLR223C MKT1P40850 830 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C WWM1P43582 211 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C RMD9P53140 646 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C FIN1Q03898 291 aa1.3□□□□□ -2.2
IFH1YLR223C AMD1P15274 810 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C GLK1P17709 500 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C DEG1P31115 442 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C REC114P32841 428 aa1.3□□□□□ -2.2
IFH1YLR223C CMC1P36064 111 aa1.3□□□□□ -2.2
IFH1YLR223C NDT80P38830 627 aa1.3□□□□□ -2.2
IFH1YLR223C POP6P53218 158 aa1.3□□□□□ -2.2
IFH1YLR223C PCP1P53259 346 aa1.3□□□□□ -2.2
IFH1YLR223C YIF1P53845 314 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C MDM1Q01846 1127 aa1.3□□□□□ -2.2
IFH1YLR223C HEL2Q05580 639 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C SEC39Q12745 709 aa1.3□□□□□ -2.2
IFH1YLR223C BRR1Q99177 341 aaPredicted RBP1.3□□□□□ -2.2
IFH1YLR223C FUR1P18562 216 aaKnown RBP1.3□□□□□ -2.2
IFH1YLR223C SPB1P25582 841 aaPredicted RBP1.3□□□□□ -2.2
IFH1YLR223C RAD14P28519 371 aa1.3□□□□□ -2.2
IFH1YLR223C NDI1P32340 513 aa1.3□□□□□ -2.2
IFH1YLR223C ATP11P32453 318 aa1.3□□□□□ -2.2
IFH1YLR223C MRE11P32829 692 aa1.3□□□□□ -2.2
IFH1YLR223C JNM1P36224 373 aa1.3□□□□□ -2.2
IFH1YLR223C AVT4P50944 713 aa1.3□□□□□ -2.2
IFH1YLR223C MUM3Q08750 479 aa1.3□□□□□ -2.2
IFH1YLR223C CKA1P15790 372 aa1.29□□□□□ -2.2
IFH1YLR223C BUB3P26449 341 aa1.29□□□□□ -2.2
IFH1YLR223C YCR041WP37265 110 aa1.29□□□□□ -2.2
IFH1YLR223C NAT2P37293 288 aa1.29□□□□□ -2.2
IFH1YLR223C THI2P38141 450 aa1.29□□□□□ -2.2
IFH1YLR223C NAB3P38996 802 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
IFH1YLR223C SYG1P40528 902 aa1.29□□□□□ -2.2
IFH1YLR223C VTC2P43585 828 aa1.29□□□□□ -2.2
IFH1YLR223C NCA3P46955 337 aa1.29□□□□□ -2.2
IFH1YLR223C YDL186WP48568 277 aa1.29□□□□□ -2.2
IFH1YLR223C YGL108CP53139 140 aa1.29□□□□□ -2.2
IFH1YLR223C DSL1P53847 754 aa1.29□□□□□ -2.2
IFH1YLR223C SYF1Q04048 859 aaPredicted RBP1.29□□□□□ -2.2
IFH1YLR223C MRD1Q06106 887 aaKnown RBP1.29□□□□□ -2.2
IFH1YLR223C YPL199CQ08954 240 aa1.29□□□□□ -2.2
IFH1YLR223C YLL056CQ12177 298 aa1.29□□□□□ -2.2
IFH1YLR223C RRI2Q12348 645 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms