RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W YMR155WQ03795 547 aa3.22□□□□□ -1.89
NOP56YLR197W IVY1Q04934 453 aa3.22□□□□□ -1.89
NOP56YLR197W YDL009CQ12210 107 aa3.22□□□□□ -1.89
NOP56YLR197W PGA3Q12746 312 aaKnown RBP3.22□□□□□ -1.89
NOP56YLR197W CAR1P00812 333 aaKnown RBP3.21□□□□□ -1.9
NOP56YLR197W MTF1P14908 341 aaKnown RBP3.21□□□□□ -1.9
NOP56YLR197W FRE1P32791 686 aa3.21□□□□□ -1.9
NOP56YLR197W MDM31P38880 579 aa3.21□□□□□ -1.9
NOP56YLR197W SMF1P38925 575 aa3.21□□□□□ -1.9
NOP56YLR197W LSM5P40089 93 aaKnown RBP3.21□□□□□ -1.9
NOP56YLR197W RPR2P40571 144 aa3.21□□□□□ -1.9
NOP56YLR197W GPD2P41911 440 aaKnown RBP3.21□□□□□ -1.9
NOP56YLR197W YFR016CP43597 1233 aaKnown RBP3.21□□□□□ -1.9
NOP56YLR197W TWF1P53250 332 aa3.21□□□□□ -1.9
NOP56YLR197W RTT103Q05543 409 aa3.21□□□□□ -1.9
NOP56YLR197W MRPL51Q06090 140 aaPredicted RBP3.21□□□□□ -1.9
NOP56YLR197W PHO92Q06390 306 aa3.21□□□□□ -1.9
NOP56YLR197W ATG29Q12092 213 aa3.21□□□□□ -1.9
NOP56YLR197W SEC39Q12745 709 aa3.21□□□□□ -1.9
NOP56YLR197W YBR298C-AQ8TGK4 73 aa3.21□□□□□ -1.9
NOP56YLR197W COR1P07256 457 aa3.2□□□□□ -1.9
NOP56YLR197W YCR022CP25620 114 aa3.2□□□□□ -1.9
NOP56YLR197W BUD14P27637 709 aa3.2□□□□□ -1.9
NOP56YLR197W SPC110P32380 944 aa3.2□□□□□ -1.9
NOP56YLR197W CMC1P36064 111 aa3.2□□□□□ -1.9
NOP56YLR197W MTC4P38335 694 aaKnown RBP3.2□□□□□ -1.9
NOP56YLR197W OTU2P38747 307 aaKnown RBP3.2□□□□□ -1.9
NOP56YLR197W RPH1P39956 796 aa3.2□□□□□ -1.9
NOP56YLR197W CAF130P53280 1122 aaPredicted RBP3.2□□□□□ -1.9
NOP56YLR197W ERP1Q05359 219 aaKnown RBP3.2□□□□□ -1.9
NOP56YLR197W MRD1Q06106 887 aaKnown RBP3.2□□□□□ -1.9
NOP56YLR197W SET6Q12529 373 aa3.2□□□□□ -1.9
NOP56YLR197W YDL007C-AQ2V2Q0 85 aa3.2□□□□□ -1.9
NOP56YLR197W RPL31BP0C2H9 113 aaKnown RBP3.19□□□□□ -1.9
NOP56YLR197W PDX1P16451 410 aa3.19□□□□□ -1.9
NOP56YLR197W CLB3P24870 427 aa3.19□□□□□ -1.9
NOP56YLR197W DBF4P32325 704 aa3.19□□□□□ -1.9
NOP56YLR197W PXA2P34230 853 aa3.19□□□□□ -1.9
NOP56YLR197W COS10P52924 374 aa3.19□□□□□ -1.9
NOP56YLR197W GPI1P53306 609 aa3.19□□□□□ -1.9
NOP56YLR197W IRC15Q02733 499 aa3.19□□□□□ -1.9
NOP56YLR197W RQC1Q05468 723 aaKnown RBP3.19□□□□□ -1.9
NOP56YLR197W RBS1Q05672 457 aaKnown RBP3.19□□□□□ -1.9
NOP56YLR197W PPT2Q12036 173 aa3.19□□□□□ -1.9
NOP56YLR197W AYT1Q12226 474 aa3.19□□□□□ -1.9
NOP56YLR197W LSP1Q12230 341 aaKnown RBP3.19□□□□□ -1.9
NOP56YLR197W BRR1Q99177 341 aaPredicted RBP3.19□□□□□ -1.9
NOP56YLR197W GDH1P07262 454 aaKnown RBP3.19□□□□□ -1.9
NOP56YLR197W PRP16P15938 1071 aaPredicted RBP3.19□□□□□ -1.9
NOP56YLR197W GLK1P17709 500 aaKnown RBP3.19□□□□□ -1.9
NOP56YLR197W MCK1P21965 375 aaKnown RBP3.19□□□□□ -1.9
NOP56YLR197W RPC53P25441 422 aa3.19□□□□□ -1.9
NOP56YLR197W PMT1P33775 817 aa3.19□□□□□ -1.9
NOP56YLR197W KRE9P39005 276 aa3.19□□□□□ -1.9
NOP56YLR197W YDL186WP48568 277 aa3.19□□□□□ -1.9
NOP56YLR197W SLG1P54867 378 aa3.19□□□□□ -1.9
NOP56YLR197W PDS5Q04264 1277 aa3.19□□□□□ -1.9
NOP56YLR197W VPS74Q06385 345 aa3.19□□□□□ -1.9
NOP56YLR197W CFT2Q12102 859 aaPredicted RBP3.19□□□□□ -1.9
NOP56YLR197W MES1P00958 751 aaKnown RBP3.18□□□□□ -1.9
NOP56YLR197W EXO70P19658 623 aa3.18□□□□□ -1.9
NOP56YLR197W VMA8P32610 256 aaKnown RBP3.18□□□□□ -1.9
NOP56YLR197W RGT1P32862 1170 aa3.18□□□□□ -1.9
NOP56YLR197W SEC66P33754 206 aa3.18□□□□□ -1.9
NOP56YLR197W KEL1P38853 1164 aaKnown RBP3.18□□□□□ -1.9
NOP56YLR197W SHO1P40073 367 aa3.18□□□□□ -1.9
NOP56YLR197W HXT14P42833 540 aa3.18□□□□□ -1.9
NOP56YLR197W YGR250CP53316 781 aaKnown RBP3.18□□□□□ -1.9
NOP56YLR197W YML133CQ03099 1374 aa3.17□□□□□ -1.9
NOP56YLR197W YLL067CQ07888 1374 aa3.17□□□□□ -1.9
NOP56YLR197W YLL066CQ99208 1374 aa3.17□□□□□ -1.9
NOP56YLR197W RPL20AP0CX23 172 aaKnown RBP3.17□□□□□ -1.9
NOP56YLR197W RPL20BP0CX24 172 aaPredicted RBP3.17□□□□□ -1.9
NOP56YLR197W REC107P21651 314 aa3.17□□□□□ -1.9
NOP56YLR197W SAS3P34218 831 aa3.17□□□□□ -1.9
NOP56YLR197W PMU1P36069 295 aa3.17□□□□□ -1.9
NOP56YLR197W YJL213WP40896 331 aa3.17□□□□□ -1.9
NOP56YLR197W SSU1P41930 458 aa3.17□□□□□ -1.9
NOP56YLR197W TAP42Q04372 366 aa3.17□□□□□ -1.9
NOP56YLR197W KEL3Q08979 651 aaPredicted RBP3.17□□□□□ -1.9
NOP56YLR197W RKM5Q12367 367 aa3.17□□□□□ -1.9
NOP56YLR197W SMC6Q12749 1114 aa3.17□□□□□ -1.9
NOP56YLR197W YOL159C-AQ3E769 90 aa3.17□□□□□ -1.9
NOP56YLR197W RAV1P47104 1357 aa3.16□□□□□ -1.9
NOP56YLR197W CYB2P00175 591 aa3.16□□□□□ -1.9
NOP56YLR197W HEM2P05373 342 aa3.16□□□□□ -1.9
NOP56YLR197W CLC1P17891 233 aa3.16□□□□□ -1.9
NOP56YLR197W FUN19P28003 413 aaPredicted RBP3.16□□□□□ -1.9
NOP56YLR197W ATP11P32453 318 aa3.16□□□□□ -1.9
NOP56YLR197W SRP72P38688 640 aaKnown RBP3.16□□□□□ -1.9
NOP56YLR197W HAT2P39984 401 aa3.16□□□□□ -1.9
NOP56YLR197W YMR147WP40218 223 aaKnown RBP3.16□□□□□ -1.9
NOP56YLR197W SYG1P40528 902 aa3.16□□□□□ -1.9
NOP56YLR197W POP1P41812 875 aa3.16□□□□□ -1.9
NOP56YLR197W VTA1Q06263 330 aa3.16□□□□□ -1.9
NOP56YLR197W YRF1-4O13559 1382 aa3.16□□□□□ -1.9
NOP56YLR197W ATR1P13090 542 aa3.15□□□□□ -1.9
NOP56YLR197W BUB3P26449 341 aa3.15□□□□□ -1.9
NOP56YLR197W AGA1P32323 725 aa3.15□□□□□ -1.9
NOP56YLR197W PEX5P35056 612 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 2676.1 ms