RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C YHR210CP38893 341 aa2.87□□□□□ -1.95
NYV1YLR093C ARC1P46672 376 aaKnown RBP2.87□□□□□ -1.95
NYV1YLR093C DUO1P53168 247 aaKnown RBP2.87□□□□□ -1.95
NYV1YLR093C DRN1P53255 507 aaKnown RBP2.87□□□□□ -1.95
NYV1YLR093C YGR250CP53316 781 aaKnown RBP2.87□□□□□ -1.95
NYV1YLR093C BSC5P53755 489 aa2.87□□□□□ -1.95
NYV1YLR093C MRPL19P53875 158 aa2.87□□□□□ -1.95
NYV1YLR093C ARK1P53974 638 aa2.87□□□□□ -1.95
NYV1YLR093C YSA1Q01976 231 aa2.87□□□□□ -1.95
NYV1YLR093C MFB1Q04922 465 aa2.87□□□□□ -1.95
NYV1YLR093C IVY1Q04934 453 aa2.87□□□□□ -1.95
NYV1YLR093C YLR287CQ05881 355 aa2.87□□□□□ -1.95
NYV1YLR093C HSH49Q99181 213 aaPredicted RBP2.87□□□□□ -1.95
NYV1YLR093C HIP1P06775 603 aa2.86□□□□□ -1.95
NYV1YLR093C UTR4P32626 227 aa2.86□□□□□ -1.95
NYV1YLR093C MRP4P32902 394 aa2.86□□□□□ -1.95
NYV1YLR093C NOP4P37838 685 aaKnown RBP2.86□□□□□ -1.95
NYV1YLR093C YIL067CP40514 678 aa2.86□□□□□ -1.95
NYV1YLR093C PTR3P43606 678 aa2.86□□□□□ -1.95
NYV1YLR093C GWT1P47026 490 aa2.86□□□□□ -1.95
NYV1YLR093C APT1P49435 187 aaKnown RBP2.86□□□□□ -1.95
NYV1YLR093C DSD1P53095 428 aa2.86□□□□□ -1.95
NYV1YLR093C RSC1P53236 928 aa2.86□□□□□ -1.95
NYV1YLR093C VPS75P53853 264 aa2.86□□□□□ -1.95
NYV1YLR093C RIX7Q07844 837 aaKnown RBP2.86□□□□□ -1.95
NYV1YLR093C ESA1Q08649 445 aa2.86□□□□□ -1.95
NYV1YLR093C RBD2Q12270 262 aa2.86□□□□□ -1.95
NYV1YLR093C SKM1Q12469 655 aa2.86□□□□□ -1.95
NYV1YLR093C ARG3P05150 338 aa2.85□□□□□ -1.95
NYV1YLR093C CDC24P11433 854 aaPredicted RBP2.85□□□□□ -1.95
NYV1YLR093C CLN3P13365 580 aa2.85□□□□□ -1.95
NYV1YLR093C CKA1P15790 372 aa2.85□□□□□ -1.95
NYV1YLR093C ERG3P32353 365 aa2.85□□□□□ -1.95
NYV1YLR093C VMA8P32610 256 aaKnown RBP2.85□□□□□ -1.95
NYV1YLR093C LSM5P40089 93 aaKnown RBP2.85□□□□□ -1.95
NYV1YLR093C GPD2P41911 440 aaKnown RBP2.85□□□□□ -1.95
NYV1YLR093C ELP2P42935 788 aa2.85□□□□□ -1.95
NYV1YLR093C YGR126WP53274 230 aa2.85□□□□□ -1.95
NYV1YLR093C SYF1Q04048 859 aaPredicted RBP2.85□□□□□ -1.95
NYV1YLR093C NBP2Q12163 236 aa2.85□□□□□ -1.95
NYV1YLR093C RRG1Q12167 365 aaPredicted RBP2.85□□□□□ -1.95
NYV1YLR093C GCN4P03069 281 aa2.84□□□□□ -1.95
NYV1YLR093C RPC53P25441 422 aa2.84□□□□□ -1.95
NYV1YLR093C RPL32P38061 130 aaKnown RBP2.84□□□□□ -1.95
NYV1YLR093C FLC2P39719 783 aa2.84□□□□□ -1.95
NYV1YLR093C MRX6P48564 524 aa2.84□□□□□ -1.95
NYV1YLR093C CAF40P53829 373 aa2.84□□□□□ -1.95
NYV1YLR093C NGL3Q03210 505 aa2.84□□□□□ -1.95
NYV1YLR093C MRPL35Q06678 367 aa2.84□□□□□ -1.95
NYV1YLR093C NMD4Q12129 218 aa2.84□□□□□ -1.95
NYV1YLR093C YBR126W-AQ8TGU7 68 aa2.84□□□□□ -1.95
NYV1YLR093C HSP82P02829 709 aaKnown RBP2.83□□□□□ -1.96
NYV1YLR093C MET17P06106 444 aa2.83□□□□□ -1.96
NYV1YLR093C RED1P14291 827 aa2.83□□□□□ -1.96
NYV1YLR093C KAR3P17119 729 aa2.83□□□□□ -1.96
NYV1YLR093C FUR1P18562 216 aaKnown RBP2.83□□□□□ -1.96
NYV1YLR093C OPI1P21957 404 aa2.83□□□□□ -1.96
NYV1YLR093C YCK1P23291 538 aa2.83□□□□□ -1.96
NYV1YLR093C ROX1P25042 368 aa2.83□□□□□ -1.96
NYV1YLR093C ICS2P38284 255 aa2.83□□□□□ -1.96
NYV1YLR093C UTP9P38882 575 aaKnown RBP2.83□□□□□ -1.96
NYV1YLR093C SPO22P40511 975 aa2.83□□□□□ -1.96
NYV1YLR093C ARF3P40994 183 aaRIP-Chip data2.83□□□□□ -1.96not detected
NYV1YLR093C YML6P51998 286 aa2.83□□□□□ -1.96
NYV1YLR093C YDR131CQ03899 556 aa2.83□□□□□ -1.96
NYV1YLR093C RAD30Q04049 632 aa2.83□□□□□ -1.96
NYV1YLR093C SXM1Q04175 944 aaKnown RBP2.83□□□□□ -1.96
NYV1YLR093C YPL272CQ08984 517 aa2.83□□□□□ -1.96
NYV1YLR093C YDL012CQ12489 107 aa2.83□□□□□ -1.96
NYV1YLR093C RAD52P06778 471 aaKnown RBP2.82□□□□□ -1.96
NYV1YLR093C SEC53P07283 254 aaKnown RBP2.82□□□□□ -1.96
NYV1YLR093C PDX1P16451 410 aa2.82□□□□□ -1.96
NYV1YLR093C KGD1P20967 1014 aaKnown RBP2.82□□□□□ -1.96
NYV1YLR093C IMG1P25626 169 aa2.82□□□□□ -1.96
NYV1YLR093C SWI3P32591 825 aa2.82□□□□□ -1.96
NYV1YLR093C PEX5P35056 612 aa2.82□□□□□ -1.96
NYV1YLR093C BYE1P36106 594 aa2.82□□□□□ -1.96
NYV1YLR093C CIN4P39110 191 aa2.82□□□□□ -1.96
NYV1YLR093C YMR027WQ04371 470 aa2.82□□□□□ -1.96
NYV1YLR093C CTI6Q08923 506 aa2.82□□□□□ -1.96
NYV1YLR093C SFI1Q12369 946 aa2.82□□□□□ -1.96
NYV1YLR093C NOP58Q12499 511 aaKnown RBP2.82□□□□□ -1.96
NYV1YLR093C ADH2P00331 348 aaKnown RBP2.81□□□□□ -1.96
NYV1YLR093C OCA4P25366 362 aa2.81□□□□□ -1.96
NYV1YLR093C CDC60P26637 1090 aaKnown RBP2.81□□□□□ -1.96
NYV1YLR093C SDH3P33421 198 aa2.81□□□□□ -1.96
NYV1YLR093C LRP1P38801 184 aaKnown RBP2.81□□□□□ -1.96
NYV1YLR093C APE4P38821 490 aa2.81□□□□□ -1.96
NYV1YLR093C YFL067WP43537 175 aa2.81□□□□□ -1.96
NYV1YLR093C SHY1P53266 389 aa2.81□□□□□ -1.96
NYV1YLR093C GPI1P53306 609 aa2.81□□□□□ -1.96
NYV1YLR093C YMR155WQ03795 547 aa2.81□□□□□ -1.96
NYV1YLR093C PHO92Q06390 306 aa2.81□□□□□ -1.96
NYV1YLR093C TCO89Q08921 799 aa2.81□□□□□ -1.96
NYV1YLR093C HUA2Q12134 243 aa2.81□□□□□ -1.96
NYV1YLR093C GRX6Q12438 231 aa2.81□□□□□ -1.96
NYV1YLR093C RTN2Q12443 393 aa2.81□□□□□ -1.96
NYV1YLR093C PEP4P07267 405 aaKnown RBP2.8□□□□□ -1.96
NYV1YLR093C CHS1P08004 1131 aa2.8□□□□□ -1.96
NYV1YLR093C CPR4P25334 318 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms