RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W NHX1Q04121 633 aa6.22□□□□□ -1.41
GEF1YJR040W ARA2Q04212 335 aa6.22□□□□□ -1.41
GEF1YJR040W YLR012CQ07927 99 aa6.22□□□□□ -1.41
GEF1YJR040W ATP6P00854 259 aa6.21□□□□□ -1.41
GEF1YJR040W RPS17AP02407 136 aaKnown RBP6.21□□□□□ -1.41
GEF1YJR040W INO1P11986 533 aa6.21□□□□□ -1.41
GEF1YJR040W RPS17BP14127 136 aaKnown RBP6.21□□□□□ -1.41
GEF1YJR040W SWD1P39706 426 aa6.21□□□□□ -1.41
GEF1YJR040W CNN1P43618 361 aa6.21□□□□□ -1.41
GEF1YJR040W KEL2P50090 882 aa6.21□□□□□ -1.41
GEF1YJR040W TOF2Q02208 771 aa6.21□□□□□ -1.41
GEF1YJR040W LEE1Q02799 301 aaKnown RBP6.21□□□□□ -1.41
GEF1YJR040W PIR3Q03180 325 aa6.21□□□□□ -1.41
GEF1YJR040W NGL2Q03264 515 aaKnown RBP6.21□□□□□ -1.41
GEF1YJR040W NSE5Q03718 556 aa6.21□□□□□ -1.41
GEF1YJR040W ECM11Q04110 302 aa6.21□□□□□ -1.41
GEF1YJR040W YOR289WQ12012 251 aaPredicted RBP6.21□□□□□ -1.41
GEF1YJR040W NSL1Q12143 216 aa6.21□□□□□ -1.41
GEF1YJR040W YPL247CQ12523 523 aa6.21□□□□□ -1.41
GEF1YJR040W RPS9AO13516 197 aaKnown RBP6.21□□□□□ -1.42
GEF1YJR040W GAL3P13045 520 aa6.21□□□□□ -1.42
GEF1YJR040W APE1P14904 514 aa6.21□□□□□ -1.42
GEF1YJR040W CSM1P25651 190 aa6.21□□□□□ -1.42
GEF1YJR040W UBC8P28263 218 aa6.21□□□□□ -1.42
GEF1YJR040W BEM1P29366 551 aa6.21□□□□□ -1.42
GEF1YJR040W VPS51P36116 164 aa6.21□□□□□ -1.42
GEF1YJR040W ATG7P38862 630 aa6.21□□□□□ -1.42
GEF1YJR040W QDR2P40474 542 aa6.21□□□□□ -1.42
GEF1YJR040W GUS1P46655 708 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
GEF1YJR040W SNG1P46950 547 aa6.21□□□□□ -1.42
GEF1YJR040W HOC1P47124 396 aa6.21□□□□□ -1.42
GEF1YJR040W ARO8P53090 500 aaKnown RBP6.21□□□□□ -1.42
GEF1YJR040W SNF12P53628 566 aa6.21□□□□□ -1.42
GEF1YJR040W YPL014WQ02606 381 aa6.21□□□□□ -1.42
GEF1YJR040W RTN1Q04947 295 aaKnown RBP6.21□□□□□ -1.42
GEF1YJR040W COS7Q07788 383 aa6.21□□□□□ -1.42
GEF1YJR040W RSC58Q07979 502 aa6.21□□□□□ -1.42
GEF1YJR040W YPQ1Q12010 308 aa6.21□□□□□ -1.42
GEF1YJR040W UBX3Q12229 455 aa6.21□□□□□ -1.42
GEF1YJR040W MED4Q12343 284 aa6.21□□□□□ -1.42
GEF1YJR040W LPX1Q12405 387 aaKnown RBP6.21□□□□□ -1.42
GEF1YJR040W MED11Q99278 115 aa6.21□□□□□ -1.42
GEF1YJR040W KGD1P20967 1014 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W BEM3P32873 1128 aa6.2□□□□□ -1.42
GEF1YJR040W ARC19P33204 171 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W MRPL17P36528 281 aa6.2□□□□□ -1.42
GEF1YJR040W YIL161WP40449 235 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W DLD2P46681 530 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W RPS10BP46784 105 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W YJR154WP47181 346 aa6.2□□□□□ -1.42
GEF1YJR040W YGR053CP53234 283 aa6.2□□□□□ -1.42
GEF1YJR040W NRD1P53617 575 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
GEF1YJR040W CAF40P53829 373 aa6.2□□□□□ -1.42
GEF1YJR040W RMI1Q02685 241 aa6.2□□□□□ -1.42
GEF1YJR040W RLI1Q03195 608 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W YDR344CQ05510 147 aa6.2□□□□□ -1.42
GEF1YJR040W DBP9Q06218 594 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W RPS10AQ08745 105 aaPredicted RBP6.2□□□□□ -1.42
GEF1YJR040W SAM4Q08985 325 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W MDY2Q12285 212 aa6.2□□□□□ -1.42
GEF1YJR040W NSP1P14907 823 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W PEX34P25584 144 aa6.2□□□□□ -1.42
GEF1YJR040W MRS6P32864 603 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W IST2P38250 946 aa6.2□□□□□ -1.42
GEF1YJR040W LEU5P38702 357 aa6.2□□□□□ -1.42
GEF1YJR040W MTW1P39731 289 aa6.2□□□□□ -1.42
GEF1YJR040W GIP4P39732 760 aa6.2□□□□□ -1.42
GEF1YJR040W MIT1P40002 666 aa6.2□□□□□ -1.42
GEF1YJR040W REF2P42073 533 aaPredicted RBP6.2□□□□□ -1.42
GEF1YJR040W BST1P43571 1029 aa6.2□□□□□ -1.42
GEF1YJR040W PRP24P49960 444 aaKnown RBP6.2□□□□□ -1.42
GEF1YJR040W TIM13P53299 105 aa6.2□□□□□ -1.42
GEF1YJR040W TUB4P53378 473 aa6.2□□□□□ -1.42
GEF1YJR040W RRP17Q04031 235 aaPredicted RBP6.2□□□□□ -1.42
GEF1YJR040W MUS81Q04149 632 aaPredicted RBP6.2□□□□□ -1.42
GEF1YJR040W ENT2Q05785 613 aa6.2□□□□□ -1.42
GEF1YJR040W SYT1Q06836 1226 aa6.2□□□□□ -1.42
GEF1YJR040W SUC2P00724 532 aa6.19□□□□□ -1.42
GEF1YJR040W YCR090CP25654 182 aaKnown RBP6.19□□□□□ -1.42
GEF1YJR040W ADD66P36040 267 aa6.19□□□□□ -1.42
GEF1YJR040W YFL066CP43538 392 aa6.19□□□□□ -1.42
GEF1YJR040W SRB7P47822 140 aa6.19□□□□□ -1.42
GEF1YJR040W FMP48P53233 369 aa6.19□□□□□ -1.42
GEF1YJR040W SLM2P53955 656 aa6.19□□□□□ -1.42
GEF1YJR040W ECM9Q02202 377 aa6.19□□□□□ -1.42
GEF1YJR040W VTA1Q06263 330 aa6.19□□□□□ -1.42
GEF1YJR040W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
GEF1YJR040W AVO1Q08236 1176 aa6.19□□□□□ -1.42
GEF1YJR040W MRP2P10663 115 aaPredicted RBP6.19□□□□□ -1.42
GEF1YJR040W UGA1P17649 471 aa6.19□□□□□ -1.42
GEF1YJR040W YCK2P23292 546 aaKnown RBP6.19□□□□□ -1.42
GEF1YJR040W SKG1P36169 355 aa6.19□□□□□ -1.42
GEF1YJR040W YHR045WP38775 560 aa6.19□□□□□ -1.42
GEF1YJR040W FAD1P38913 306 aa6.19□□□□□ -1.42
GEF1YJR040W UTP18P40362 594 aaPredicted RBP6.19□□□□□ -1.42
GEF1YJR040W IST3P40565 148 aaPredicted RBP6.19□□□□□ -1.42
GEF1YJR040W IMA5P40884 581 aa6.19□□□□□ -1.42
GEF1YJR040W ROK1P45818 564 aaPredicted RBP6.19□□□□□ -1.42
GEF1YJR040W AIM23P47015 356 aa6.19□□□□□ -1.42
GEF1YJR040W BIO3P50277 480 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms