RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W PLB1P39105 664 aa6.04□□□□□ -1.44
PRE3YJL001W SEO1P39709 593 aa6.04□□□□□ -1.44
PRE3YJL001W GIM4P40005 111 aaKnown RBP6.04□□□□□ -1.44
PRE3YJL001W YIL086CP40503 102 aa6.04□□□□□ -1.44
PRE3YJL001W ERR3P42222 437 aa6.04□□□□□ -1.44
PRE3YJL001W ELP2P42935 788 aa6.04□□□□□ -1.44
PRE3YJL001W OSH6Q02201 448 aa6.04□□□□□ -1.44
PRE3YJL001W VTA1Q06263 330 aa6.04□□□□□ -1.44
PRE3YJL001W CDA1Q06702 301 aa6.04□□□□□ -1.44
PRE3YJL001W ADY3Q07732 790 aa6.04□□□□□ -1.44
PRE3YJL001W MED7Q08278 222 aa6.04□□□□□ -1.44
PRE3YJL001W SLD7Q08457 257 aa6.04□□□□□ -1.44
PRE3YJL001W CYR1P08678 2026 aaKnown RBP6.04□□□□□ -1.44
PRE3YJL001W SEM1O94742 89 aa6.03□□□□□ -1.44
PRE3YJL001W URA4P20051 364 aa6.03□□□□□ -1.44
PRE3YJL001W GDA1P32621 518 aa6.03□□□□□ -1.44
PRE3YJL001W STB6P36085 766 aa6.03□□□□□ -1.44
PRE3YJL001W FTH1P38310 465 aa6.03□□□□□ -1.44
PRE3YJL001W YHR210CP38893 341 aa6.03□□□□□ -1.44
PRE3YJL001W END3P39013 349 aa6.03□□□□□ -1.44
PRE3YJL001W TAH11P47112 604 aa6.03□□□□□ -1.44
PRE3YJL001W BTN2P53286 410 aa6.03□□□□□ -1.44
PRE3YJL001W ESF2P53743 316 aaKnown RBP6.03□□□□□ -1.44
PRE3YJL001W NOP15P53927 220 aaPredicted RBP6.03□□□□□ -1.44
PRE3YJL001W SLU7Q02775 382 aaKnown RBP6.03□□□□□ -1.44
PRE3YJL001W RSF1Q05043 376 aa6.03□□□□□ -1.44
PRE3YJL001W CRR1Q05790 422 aa6.03□□□□□ -1.44
PRE3YJL001W GRS2Q06817 618 aa6.03□□□□□ -1.44
PRE3YJL001W YTM1Q12024 460 aaPredicted RBP6.03□□□□□ -1.44
PRE3YJL001W APL4Q12028 832 aa6.03□□□□□ -1.44
PRE3YJL001W HOS1Q12214 470 aa6.03□□□□□ -1.44
PRE3YJL001W YOR012WQ12351 137 aa6.03□□□□□ -1.44
PRE3YJL001W CYC1P00044 109 aaPredicted RBP6.02□□□□□ -1.45
PRE3YJL001W SEC62P21825 274 aa6.02□□□□□ -1.45
PRE3YJL001W GID7P25569 745 aa6.02□□□□□ -1.45
PRE3YJL001W SMI1P32566 505 aa6.02□□□□□ -1.45
PRE3YJL001W LRG1P35688 1017 aa6.02□□□□□ -1.45
PRE3YJL001W DEF1P35732 738 aaKnown RBP6.02□□□□□ -1.45
PRE3YJL001W RPF2P36160 344 aaKnown RBP6.02□□□□□ -1.45
PRE3YJL001W MRPL15P36523 253 aa6.02□□□□□ -1.45
PRE3YJL001W MAK5P38112 773 aaPredicted RBP6.02□□□□□ -1.45
PRE3YJL001W YBR071WP38243 211 aa6.02□□□□□ -1.45
PRE3YJL001W YSW1P38280 609 aa6.02□□□□□ -1.45
PRE3YJL001W TCD1P38756 429 aa6.02□□□□□ -1.45
PRE3YJL001W DPH1P40487 425 aaKnown RBP6.02□□□□□ -1.45
PRE3YJL001W UBC9P50623 157 aaPredicted RBP6.02□□□□□ -1.45
PRE3YJL001W PET117Q02771 107 aa6.02□□□□□ -1.45
PRE3YJL001W TRM12Q04235 462 aa6.02□□□□□ -1.45
PRE3YJL001W YDR338CQ05497 695 aa6.02□□□□□ -1.45
PRE3YJL001W YOL107WQ12239 342 aa6.02□□□□□ -1.45
PRE3YJL001W LAG2Q92325 660 aa6.02□□□□□ -1.45
PRE3YJL001W PHO5P00635 467 aa6.01□□□□□ -1.45
PRE3YJL001W GAL7P08431 366 aa6.01□□□□□ -1.45
PRE3YJL001W IME2P32581 645 aa6.01□□□□□ -1.45
PRE3YJL001W MRP21P38175 177 aa6.01□□□□□ -1.45
PRE3YJL001W MEF2P39677 819 aa6.01□□□□□ -1.45
PRE3YJL001W PFA3P42836 336 aa6.01□□□□□ -1.45
PRE3YJL001W GZF3P42944 551 aaKnown RBP6.01□□□□□ -1.45
PRE3YJL001W SGF73P53165 657 aa6.01□□□□□ -1.45
PRE3YJL001W PEX8P53248 589 aa6.01□□□□□ -1.45
PRE3YJL001W FHN1P53279 174 aa6.01□□□□□ -1.45
PRE3YJL001W RPN9Q04062 393 aaKnown RBP6.01□□□□□ -1.45
PRE3YJL001W LEU9Q12166 604 aaKnown RBP6.01□□□□□ -1.45
PRE3YJL001W HAL9Q12180 1030 aa6.01□□□□□ -1.45
PRE3YJL001W QCR6P00127 147 aa6□□□□□ -1.45
PRE3YJL001W RRP43P25359 394 aaPredicted RBP6□□□□□ -1.45
PRE3YJL001W ADH7P25377 361 aa6□□□□□ -1.45
PRE3YJL001W YCR099CP25657 155 aa6□□□□□ -1.45
PRE3YJL001W ATP11P32453 318 aa6□□□□□ -1.45
PRE3YJL001W MEI5P32489 222 aa6□□□□□ -1.45
PRE3YJL001W MGM101P32787 269 aaKnown RBP6□□□□□ -1.45
PRE3YJL001W CNS1P33313 385 aa6□□□□□ -1.45
PRE3YJL001W TIP20P33891 701 aa6□□□□□ -1.45
PRE3YJL001W KES1P35844 434 aaKnown RBP6□□□□□ -1.45
PRE3YJL001W YKR073CP36153 106 aa6□□□□□ -1.45
PRE3YJL001W SMF2P38778 549 aa6□□□□□ -1.45
PRE3YJL001W BEM4P39011 633 aa6□□□□□ -1.45
PRE3YJL001W OAF1P39720 1047 aaPredicted RBP6□□□□□ -1.45
PRE3YJL001W YMR134WP40207 237 aa6□□□□□ -1.45
PRE3YJL001W EFM4P40516 257 aa6□□□□□ -1.45
PRE3YJL001W PXA1P41909 870 aa6□□□□□ -1.45
PRE3YJL001W YFR020WP43600 232 aa6□□□□□ -1.45
PRE3YJL001W TRM9P49957 279 aa6□□□□□ -1.45
PRE3YJL001W CPR6P53691 371 aaKnown RBP6□□□□□ -1.45
PRE3YJL001W COG6P53959 839 aa6□□□□□ -1.45
PRE3YJL001W AAT1Q01802 451 aa6□□□□□ -1.45
PRE3YJL001W YLR111WQ12528 110 aa6□□□□□ -1.45
PRE3YJL001W FAS1P07149 2051 aaKnown RBP6□□□□□ -1.45
PRE3YJL001W ERG20P08524 352 aaKnown RBP5.99□□□□□ -1.45
PRE3YJL001W IMA3P0CW40 589 aa5.99□□□□□ -1.45
PRE3YJL001W IMA4P0CW41 589 aa5.99□□□□□ -1.45
PRE3YJL001W CDC24P11433 854 aaPredicted RBP5.99□□□□□ -1.45
PRE3YJL001W BUB3P26449 341 aa5.99□□□□□ -1.45
PRE3YJL001W NIP1P32497 812 aaKnown RBP5.99□□□□□ -1.45
PRE3YJL001W SFC1P33303 322 aa5.99□□□□□ -1.45
PRE3YJL001W YHR045WP38775 560 aa5.99□□□□□ -1.45
PRE3YJL001W GAT1P43574 510 aa5.99□□□□□ -1.45
PRE3YJL001W YJR030CP47101 745 aa5.99□□□□□ -1.45
PRE3YJL001W COS12P53053 380 aa5.99□□□□□ -1.45
PRE3YJL001W VPS38Q05919 439 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms