RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W MDM31P38880 579 aa2.21□□□□□ -2.06
MSL1YIR009W ELO1P39540 310 aa2.21□□□□□ -2.06
MSL1YIR009W YER130CP39959 443 aa2.21□□□□□ -2.06
MSL1YIR009W SEC28P40509 296 aaKnown RBP2.21□□□□□ -2.06
MSL1YIR009W EFM4P40516 257 aa2.21□□□□□ -2.06
MSL1YIR009W PKP2P53170 491 aa2.21□□□□□ -2.06
MSL1YIR009W TWF1P53250 332 aa2.21□□□□□ -2.06
MSL1YIR009W CAF130P53280 1122 aaPredicted RBP2.21□□□□□ -2.06
MSL1YIR009W BOR1P53838 576 aa2.21□□□□□ -2.06
MSL1YIR009W PDS5Q04264 1277 aa2.21□□□□□ -2.06
MSL1YIR009W YPL272CQ08984 517 aa2.21□□□□□ -2.06
MSL1YIR009W ATG9Q12142 997 aa2.21□□□□□ -2.06
MSL1YIR009W LEU9Q12166 604 aaKnown RBP2.21□□□□□ -2.06
MSL1YIR009W GPM3Q12326 303 aa2.21□□□□□ -2.06
MSL1YIR009W YCF1P39109 1515 aaKnown RBP2.21□□□□□ -2.06
MSL1YIR009W RPO31P04051 1460 aa2.2□□□□□ -2.06
MSL1YIR009W MDH1P17505 334 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
MSL1YIR009W SRV2P17555 526 aaKnown RBP2.2□□□□□ -2.06
MSL1YIR009W SYN8P31377 255 aa2.2□□□□□ -2.06
MSL1YIR009W ANP1P32629 500 aa2.2□□□□□ -2.06
MSL1YIR009W TOA1P32773 286 aa2.2□□□□□ -2.06
MSL1YIR009W MIA40P36046 403 aa2.2□□□□□ -2.06
MSL1YIR009W ARP1P38696 384 aa2.2□□□□□ -2.06
MSL1YIR009W CAJ1P39101 391 aa2.2□□□□□ -2.06
MSL1YIR009W EFM6P53970 246 aa2.2□□□□□ -2.06
MSL1YIR009W RPA49Q01080 415 aaPredicted RBP2.2□□□□□ -2.06
MSL1YIR009W PEX25Q02969 394 aa2.2□□□□□ -2.06
MSL1YIR009W EMI2Q04409 500 aaKnown RBP2.2□□□□□ -2.06
MSL1YIR009W HCR1Q05775 265 aaKnown RBP2.2□□□□□ -2.06
MSL1YIR009W YDL057WQ07379 328 aa2.2□□□□□ -2.06
MSL1YIR009W APL4Q12028 832 aa2.2□□□□□ -2.06
MSL1YIR009W VPS54Q12071 889 aa2.2□□□□□ -2.06
MSL1YIR009W SMF3Q12078 473 aaPredicted RBP2.2□□□□□ -2.06
MSL1YIR009W FRE6Q12473 712 aa2.2□□□□□ -2.06
MSL1YIR009W CTF3Q12748 733 aa2.2□□□□□ -2.06
MSL1YIR009W ART10P18634 518 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W RRP7P25368 297 aaPredicted RBP2.19□□□□□ -2.06
MSL1YIR009W URA7P28274 579 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W HXT3P32466 567 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W MRE11P32829 692 aa2.19□□□□□ -2.06
MSL1YIR009W YBL055CP34220 418 aaPredicted RBP2.19□□□□□ -2.06
MSL1YIR009W HCS1P34243 683 aa2.19□□□□□ -2.06
MSL1YIR009W SNU114P36048 1008 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W RPL32P38061 130 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W MSR1P38714 643 aa2.19□□□□□ -2.06
MSL1YIR009W DBP8P38719 431 aa2.19□□□□□ -2.06
MSL1YIR009W POP2P39008 433 aa2.19□□□□□ -2.06
MSL1YIR009W PKP1P40530 394 aa2.19□□□□□ -2.06
MSL1YIR009W FAR3P46671 204 aa2.19□□□□□ -2.06
MSL1YIR009W DLD2P46681 530 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W TCB2P48231 1178 aa2.19□□□□□ -2.06
MSL1YIR009W YDL186WP48568 277 aa2.19□□□□□ -2.06
MSL1YIR009W YGR127WP53275 312 aa2.19□□□□□ -2.06
MSL1YIR009W DUG3P53871 357 aa2.19□□□□□ -2.06
MSL1YIR009W RSM23Q01163 450 aa2.19□□□□□ -2.06
MSL1YIR009W YVH1Q02256 364 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W RQC1Q05468 723 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W HEL2Q05580 639 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W RBS1Q05672 457 aaKnown RBP2.19□□□□□ -2.06
MSL1YIR009W COQ9Q05779 260 aa2.19□□□□□ -2.06
MSL1YIR009W SIL1Q08199 421 aa2.19□□□□□ -2.06
MSL1YIR009W YLL056CQ12177 298 aa2.19□□□□□ -2.06
MSL1YIR009W NFI1Q12216 726 aa2.19□□□□□ -2.06
MSL1YIR009W TAF2P23255 1407 aa2.18□□□□□ -2.06
MSL1YIR009W STF1P01098 86 aa2.18□□□□□ -2.06
MSL1YIR009W TRX1P22217 103 aaKnown RBP2.18□□□□□ -2.06
MSL1YIR009W BOS1P25385 244 aa2.18□□□□□ -2.06
MSL1YIR009W PUP3P25451 205 aaKnown RBP2.18□□□□□ -2.06
MSL1YIR009W IDH2P28241 369 aaKnown RBP2.18□□□□□ -2.06
MSL1YIR009W PHD1P36093 366 aa2.18□□□□□ -2.06
MSL1YIR009W TUL1P36096 758 aa2.18□□□□□ -2.06
MSL1YIR009W NUP133P36161 1157 aa2.18□□□□□ -2.06
MSL1YIR009W YHR054CP38780 354 aa2.18□□□□□ -2.06
MSL1YIR009W UIP3P39547 235 aa2.18□□□□□ -2.06
MSL1YIR009W SPG5P42933 373 aa2.18□□□□□ -2.06
MSL1YIR009W SHE10P53075 577 aa2.18□□□□□ -2.06
MSL1YIR009W RPM2Q02773 1202 aa2.18□□□□□ -2.06
MSL1YIR009W KAP120Q02932 1032 aa2.18□□□□□ -2.06
MSL1YIR009W ADE13Q05911 482 aaKnown RBP2.18□□□□□ -2.06
MSL1YIR009W YLR456WQ06199 204 aa2.18□□□□□ -2.06
MSL1YIR009W CUE5Q08412 411 aaKnown RBP2.18□□□□□ -2.06
MSL1YIR009W DCI1Q08558 271 aa2.18□□□□□ -2.06
MSL1YIR009W SPE3Q12074 293 aaKnown RBP2.18□□□□□ -2.06
MSL1YIR009W CFT2Q12102 859 aaPredicted RBP2.18□□□□□ -2.06
MSL1YIR009W HIF1Q12373 385 aa2.18□□□□□ -2.06
MSL1YIR009W ISN1Q99312 450 aa2.18□□□□□ -2.06
MSL1YIR009W DRS2P39524 1355 aa2.18□□□□□ -2.06
MSL1YIR009W HIR3P47171 1648 aa2.17□□□□□ -2.06
MSL1YIR009W ARG81P05085 880 aa2.17□□□□□ -2.06
MSL1YIR009W RPL15AP05748 204 aaKnown RBP2.17□□□□□ -2.06
MSL1YIR009W GDH1P07262 454 aaKnown RBP2.17□□□□□ -2.06
MSL1YIR009W CPR2P23285 205 aa2.17□□□□□ -2.06
MSL1YIR009W AFG1P32317 509 aa2.17□□□□□ -2.06
MSL1YIR009W YME2P32843 850 aa2.17□□□□□ -2.06
MSL1YIR009W SWH1P35845 1188 aa2.17□□□□□ -2.06
MSL1YIR009W THI2P38141 450 aa2.17□□□□□ -2.06
MSL1YIR009W RRT2P38332 387 aa2.17□□□□□ -2.06
MSL1YIR009W TSC10P38342 320 aa2.17□□□□□ -2.06
MSL1YIR009W FAA2P39518 744 aa2.17□□□□□ -2.06
MSL1YIR009W MKT1P40850 830 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms