RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W VHC1P38329 1120 aa2.3□□□□□ -2.04
RPL40AYIL148W OSH3P38713 996 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W TIF4631P39935 952 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W CSM2P40465 213 aa2.3□□□□□ -2.04
RPL40AYIL148W YIR014WP40570 242 aa2.3□□□□□ -2.04
RPL40AYIL148W AIM22P47051 409 aa2.3□□□□□ -2.04
RPL40AYIL148W YGL108CP53139 140 aa2.3□□□□□ -2.04
RPL40AYIL148W ART5P53244 586 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W LSC1P53598 329 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W DSL1P53847 754 aa2.3□□□□□ -2.04
RPL40AYIL148W NCS2P53923 493 aaPredicted RBP2.3□□□□□ -2.04
RPL40AYIL148W SMA1Q02651 245 aa2.3□□□□□ -2.04
RPL40AYIL148W KAP120Q02932 1032 aa2.3□□□□□ -2.04
RPL40AYIL148W DIC1Q06143 298 aa2.3□□□□□ -2.04
RPL40AYIL148W LSP1Q12230 341 aaKnown RBP2.3□□□□□ -2.04
RPL40AYIL148W MES1P00958 751 aaKnown RBP2.29□□□□□ -2.04
RPL40AYIL148W BAR1P12630 587 aa2.29□□□□□ -2.04
RPL40AYIL148W RPC53P25441 422 aa2.29□□□□□ -2.04
RPL40AYIL148W NIP100P33420 868 aa2.29□□□□□ -2.04
RPL40AYIL148W ECM15P35195 104 aa2.29□□□□□ -2.04
RPL40AYIL148W GCS1P35197 352 aa2.29□□□□□ -2.04
RPL40AYIL148W STB6P36085 766 aa2.29□□□□□ -2.04
RPL40AYIL148W MMS4P38257 691 aa2.29□□□□□ -2.04
RPL40AYIL148W ARP1P38696 384 aa2.29□□□□□ -2.04
RPL40AYIL148W LSM5P40089 93 aaKnown RBP2.29□□□□□ -2.04
RPL40AYIL148W DIM1P41819 318 aaKnown RBP2.29□□□□□ -2.04
RPL40AYIL148W CIK1Q01649 594 aa2.29□□□□□ -2.04
RPL40AYIL148W IRC15Q02733 499 aa2.29□□□□□ -2.04
RPL40AYIL148W NUP53Q03790 475 aa2.29□□□□□ -2.04
RPL40AYIL148W RPC11Q04307 110 aaPredicted RBP2.29□□□□□ -2.04
RPL40AYIL148W ROY1Q04847 553 aa2.29□□□□□ -2.04
RPL40AYIL148W DON1Q05610 365 aa2.29□□□□□ -2.04
RPL40AYIL148W MRPL51Q06090 140 aaPredicted RBP2.29□□□□□ -2.04
RPL40AYIL148W VPS74Q06385 345 aa2.29□□□□□ -2.04
RPL40AYIL148W PHO92Q06390 306 aa2.29□□□□□ -2.04
RPL40AYIL148W SRL1Q08673 210 aa2.29□□□□□ -2.04
RPL40AYIL148W YOR365CQ08844 703 aa2.29□□□□□ -2.04
RPL40AYIL148W VPS54Q12071 889 aa2.29□□□□□ -2.04
RPL40AYIL148W BSC1Q12140 328 aa2.29□□□□□ -2.04
RPL40AYIL148W YOL159C-AQ3E769 90 aa2.29□□□□□ -2.04
RPL40AYIL148W GPH1P06738 902 aaKnown RBP2.28□□□□□ -2.04
RPL40AYIL148W GLN3P18494 730 aa2.28□□□□□ -2.04
RPL40AYIL148W CLB1P24868 471 aa2.28□□□□□ -2.04
RPL40AYIL148W YCR007CP25354 239 aa2.28□□□□□ -2.04
RPL40AYIL148W FUN19P28003 413 aaPredicted RBP2.28□□□□□ -2.04
RPL40AYIL148W HXT3P32466 567 aaKnown RBP2.28□□□□□ -2.04
RPL40AYIL148W YME2P32843 850 aa2.28□□□□□ -2.04
RPL40AYIL148W PTR2P32901 601 aa2.28□□□□□ -2.04
RPL40AYIL148W MSN2P33748 704 aa2.28□□□□□ -2.04
RPL40AYIL148W SPC34P36131 295 aa2.28□□□□□ -2.04
RPL40AYIL148W RIM2P38127 377 aa2.28□□□□□ -2.04
RPL40AYIL148W CCT4P39078 528 aaKnown RBP2.28□□□□□ -2.04
RPL40AYIL148W YIL152WP40455 235 aa2.28□□□□□ -2.04
RPL40AYIL148W ZIM17P42844 174 aa2.28□□□□□ -2.04
RPL40AYIL148W SCD6P45978 349 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
RPL40AYIL148W IKS1P47042 667 aa2.28□□□□□ -2.04
RPL40AYIL148W HOT1Q03213 719 aa2.28□□□□□ -2.04
RPL40AYIL148W SLD5Q03406 294 aa2.28□□□□□ -2.04
RPL40AYIL148W ERB1Q04660 807 aaKnown RBP2.28□□□□□ -2.04
RPL40AYIL148W SOV1Q04748 898 aa2.28□□□□□ -2.04
RPL40AYIL148W RBS1Q05672 457 aaKnown RBP2.28□□□□□ -2.04
RPL40AYIL148W THI20Q08224 551 aa2.28□□□□□ -2.04
RPL40AYIL148W APL5Q08951 932 aaKnown RBP2.28□□□□□ -2.04
RPL40AYIL148W MED2Q12124 431 aa2.28□□□□□ -2.04
RPL40AYIL148W NCE102Q12207 173 aaRIP-Chip data2.28□□□□□ -2.04not detected
RPL40AYIL148W PGA3Q12746 312 aaKnown RBP2.28□□□□□ -2.04
RPL40AYIL148W YAR066WP0CX18 203 aa2.27□□□□□ -2.05
RPL40AYIL148W YHR214WP0CX19 203 aa2.27□□□□□ -2.05
RPL40AYIL148W MTF1P14908 341 aaKnown RBP2.27□□□□□ -2.05
RPL40AYIL148W GLK1P17709 500 aaKnown RBP2.27□□□□□ -2.05
RPL40AYIL148W YCR043CP25361 127 aa2.27□□□□□ -2.05
RPL40AYIL148W ADK2P26364 225 aa2.27□□□□□ -2.05
RPL40AYIL148W PRO3P32263 286 aaKnown RBP2.27□□□□□ -2.05
RPL40AYIL148W RML2P32611 393 aa2.27□□□□□ -2.05
RPL40AYIL148W TES1P41903 349 aaKnown RBP2.27□□□□□ -2.05
RPL40AYIL148W CAK1P43568 368 aaPredicted RBP2.27□□□□□ -2.05
RPL40AYIL148W RPS0BP46654 252 aaKnown RBP2.27□□□□□ -2.05
RPL40AYIL148W COS5P47187 383 aa2.27□□□□□ -2.05
RPL40AYIL148W YML6P51998 286 aa2.27□□□□□ -2.05
RPL40AYIL148W RSC1P53236 928 aa2.27□□□□□ -2.05
RPL40AYIL148W VPS9P54787 451 aa2.27□□□□□ -2.05
RPL40AYIL148W RPA49Q01080 415 aaPredicted RBP2.27□□□□□ -2.05
RPL40AYIL148W SKO1Q02100 647 aa2.27□□□□□ -2.05
RPL40AYIL148W ERO1Q03103 563 aa2.27□□□□□ -2.05
RPL40AYIL148W YMR130WQ04223 302 aa2.27□□□□□ -2.05
RPL40AYIL148W AIM32Q04689 311 aa2.27□□□□□ -2.05
RPL40AYIL148W COS7Q07788 383 aa2.27□□□□□ -2.05
RPL40AYIL148W SIL1Q08199 421 aa2.27□□□□□ -2.05
RPL40AYIL148W REX4Q08237 289 aa2.27□□□□□ -2.05
RPL40AYIL148W CFT2Q12102 859 aaPredicted RBP2.27□□□□□ -2.05
RPL40AYIL148W TIP41Q12199 356 aa2.27□□□□□ -2.05
RPL40AYIL148W YDL009CQ12210 107 aa2.27□□□□□ -2.05
RPL40AYIL148W CTF3Q12748 733 aa2.27□□□□□ -2.05
RPL40AYIL148W CYB2P00175 591 aa2.26□□□□□ -2.05
RPL40AYIL148W YFL068WP0CX99 160 aa2.26□□□□□ -2.05
RPL40AYIL148W YLL066W-AP0CY00 160 aa2.26□□□□□ -2.05
RPL40AYIL148W YLL067W-AP0CY01 160 aa2.26□□□□□ -2.05
RPL40AYIL148W PMS1P14242 873 aa2.26□□□□□ -2.05
RPL40AYIL148W MDH1P17505 334 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RPL40AYIL148W ATP10P18496 279 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms