RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YOL107WQ12239 342 aa3.58□□□□□ -1.84
PDX1YGR193C INP53Q12271 1107 aa3.58□□□□□ -1.84
PDX1YGR193C SKM1Q12469 655 aa3.58□□□□□ -1.84
PDX1YGR193C YPR089WO13585 888 aa3.57□□□□□ -1.84
PDX1YGR193C MSF1P08425 469 aa3.57□□□□□ -1.84
PDX1YGR193C TUB1P09733 447 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C RPL27AP0C2H6 136 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C RPL27BP0C2H7 136 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C RPS24AP0CX31 135 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C RPS24BP0CX32 135 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C RPL19AP0CX82 189 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C RPL19BP0CX83 189 aaPredicted RBP3.57□□□□□ -1.84
PDX1YGR193C PET122P10355 254 aa3.57□□□□□ -1.84
PDX1YGR193C RAD14P28519 371 aa3.57□□□□□ -1.84
PDX1YGR193C ITR2P30606 609 aa3.57□□□□□ -1.84
PDX1YGR193C CRM1P30822 1084 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C MVD1P32377 396 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C HXT4P32467 576 aa3.57□□□□□ -1.84
PDX1YGR193C RPD3P32561 433 aa3.57□□□□□ -1.84
PDX1YGR193C YBL010CP32788 280 aa3.57□□□□□ -1.84
PDX1YGR193C TYE7P33122 291 aaPredicted RBP3.57□□□□□ -1.84
PDX1YGR193C SEC66P33754 206 aa3.57□□□□□ -1.84
PDX1YGR193C AIM29P36154 155 aa3.57□□□□□ -1.84
PDX1YGR193C MNN2P38069 597 aa3.57□□□□□ -1.84
PDX1YGR193C FIG1P38224 298 aa3.57□□□□□ -1.84
PDX1YGR193C RPN10P38886 268 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C SMF1P38925 575 aa3.57□□□□□ -1.84
PDX1YGR193C FRT2P39734 528 aa3.57□□□□□ -1.84
PDX1YGR193C TSC11P40061 1430 aa3.57□□□□□ -1.84
PDX1YGR193C ERG10P41338 398 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C GAB1P41733 394 aa3.57□□□□□ -1.84
PDX1YGR193C UBP6P43593 499 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C GUS1P46655 708 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
PDX1YGR193C FMS1P50264 508 aa3.57□□□□□ -1.84
PDX1YGR193C NSA1P53136 463 aaPredicted RBP3.57□□□□□ -1.84
PDX1YGR193C TWF1P53250 332 aa3.57□□□□□ -1.84
PDX1YGR193C NOP13P53883 403 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
PDX1YGR193C HEF3P53978 1044 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C ECM9Q02202 377 aa3.57□□□□□ -1.84
PDX1YGR193C CTF19Q02732 369 aa3.57□□□□□ -1.84
PDX1YGR193C PRM15Q03262 622 aa3.57□□□□□ -1.84
PDX1YGR193C TAF12Q03761 539 aa3.57□□□□□ -1.84
PDX1YGR193C RCO1Q04779 684 aa3.57□□□□□ -1.84
PDX1YGR193C BCH1Q05029 724 aa3.57□□□□□ -1.84
PDX1YGR193C DUS3Q06053 668 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C GPN3Q06543 272 aa3.57□□□□□ -1.84
PDX1YGR193C CTI6Q08923 506 aa3.57□□□□□ -1.84
PDX1YGR193C HFI1Q12060 488 aa3.57□□□□□ -1.84
PDX1YGR193C GET3Q12154 354 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C TIP41Q12199 356 aa3.57□□□□□ -1.84
PDX1YGR193C VAM3Q12241 283 aa3.57□□□□□ -1.84
PDX1YGR193C HTZ1Q12692 134 aaKnown RBP3.57□□□□□ -1.84
PDX1YGR193C CTF3Q12748 733 aa3.57□□□□□ -1.84
PDX1YGR193C YOL159C-AQ3E769 90 aa3.57□□□□□ -1.84
PDX1YGR193C ISN1Q99312 450 aa3.57□□□□□ -1.84
PDX1YGR193C TOP2P06786 1428 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C PDR18P53756 1333 aa3.56□□□□□ -1.84
PDX1YGR193C RPL24AP04449 155 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C PDE2P06776 526 aa3.56□□□□□ -1.84
PDX1YGR193C FRS1P15624 595 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C CBF1P17106 351 aa3.56□□□□□ -1.84
PDX1YGR193C SNF6P18888 332 aa3.56□□□□□ -1.84
PDX1YGR193C COQ1P18900 473 aa3.56□□□□□ -1.84
PDX1YGR193C ERG6P25087 383 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C SEC1P30619 724 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C AFG1P32317 509 aa3.56□□□□□ -1.84
PDX1YGR193C PEX2P32800 271 aa3.56□□□□□ -1.84
PDX1YGR193C PIN4P34217 668 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
PDX1YGR193C GEX2P36173 615 aa3.56□□□□□ -1.84
PDX1YGR193C FZO1P38297 855 aa3.56□□□□□ -1.84
PDX1YGR193C TSL1P38427 1098 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C TDA3P38758 523 aa3.56□□□□□ -1.84
PDX1YGR193C AFG3P39925 761 aa3.56□□□□□ -1.84
PDX1YGR193C YER158CP40095 573 aa3.56□□□□□ -1.84
PDX1YGR193C PUG1P40100 303 aa3.56□□□□□ -1.84
PDX1YGR193C PSF2P40359 213 aa3.56□□□□□ -1.84
PDX1YGR193C ARC1P46672 376 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C NPA3P47122 385 aa3.56□□□□□ -1.84
PDX1YGR193C EFM3P47163 339 aa3.56□□□□□ -1.84
PDX1YGR193C CCC1P47818 322 aa3.56□□□□□ -1.84
PDX1YGR193C MRX6P48564 524 aa3.56□□□□□ -1.84
PDX1YGR193C YGL204CP53089 101 aa3.56□□□□□ -1.84
PDX1YGR193C MND1P53102 219 aa3.56□□□□□ -1.84
PDX1YGR193C RRT6P53117 311 aaPredicted RBP3.56□□□□□ -1.84
PDX1YGR193C YGR111WP53265 400 aa3.56□□□□□ -1.84
PDX1YGR193C CPR6P53691 371 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C YNL143CP53908 130 aa3.56□□□□□ -1.84
PDX1YGR193C NUP116Q02630 1113 aa3.56□□□□□ -1.84
PDX1YGR193C YDC1Q02896 317 aa3.56□□□□□ -1.84
PDX1YGR193C MRP51Q02950 344 aa3.56□□□□□ -1.84
PDX1YGR193C RPN9Q04062 393 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C YDR222WQ04925 415 aa3.56□□□□□ -1.84
PDX1YGR193C HCR1Q05775 265 aaKnown RBP3.56□□□□□ -1.84
PDX1YGR193C YLR283WQ05867 314 aa3.56□□□□□ -1.84
PDX1YGR193C YPR196WQ06595 470 aa3.56□□□□□ -1.84
PDX1YGR193C YDR306CQ06640 478 aa3.56□□□□□ -1.84
PDX1YGR193C YPR091CQ06833 770 aa3.56□□□□□ -1.84
PDX1YGR193C YDL144CQ07589 356 aa3.56□□□□□ -1.84
PDX1YGR193C YLL007CQ07799 665 aa3.56□□□□□ -1.84
PDX1YGR193C RCN2Q12044 265 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms