RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W NSP1P14907 823 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W HPR1P17629 752 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W MET16P18408 261 aaPredicted RBP7.87□□□□□ -1.15
UFD1YGR048W VMA16P23968 213 aa7.87□□□□□ -1.15
UFD1YGR048W SED4P25365 1065 aa7.87□□□□□ -1.15
UFD1YGR048W SYP1P25623 870 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W CDC20P26309 610 aa7.87□□□□□ -1.15
UFD1YGR048W PET127P32606 800 aa7.87□□□□□ -1.15
UFD1YGR048W HIS7P33734 552 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W SPC34P36131 295 aa7.87□□□□□ -1.15
UFD1YGR048W TFA2P36145 328 aa7.87□□□□□ -1.15
UFD1YGR048W ARN1P38731 627 aa7.87□□□□□ -1.15
UFD1YGR048W PTI1P39927 425 aaPredicted RBP7.87□□□□□ -1.15
UFD1YGR048W AVT2P39981 480 aa7.87□□□□□ -1.15
UFD1YGR048W HLJ1P48353 224 aa7.87□□□□□ -1.15
UFD1YGR048W RPS12P48589 143 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W PMT5P52867 743 aa7.87□□□□□ -1.15
UFD1YGR048W MRH4P53166 561 aa7.87□□□□□ -1.15
UFD1YGR048W NOG2P53742 486 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W YNL010WP53981 241 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W CWC21Q03375 135 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W TAF11Q04226 346 aa7.87□□□□□ -1.15
UFD1YGR048W NEJ1Q06148 342 aa7.87□□□□□ -1.15
UFD1YGR048W SWA2Q06677 668 aa7.87□□□□□ -1.15
UFD1YGR048W YDL057WQ07379 328 aa7.87□□□□□ -1.15
UFD1YGR048W YCL001W-BQ96VH2 84 aa7.87□□□□□ -1.15
UFD1YGR048W RAD7P06779 565 aa7.86□□□□□ -1.15
UFD1YGR048W SWI5P08153 709 aa7.86□□□□□ -1.15
UFD1YGR048W EST1P17214 699 aaPredicted RBP7.86□□□□□ -1.15
UFD1YGR048W RPS7AP26786 190 aaKnown RBP7.86□□□□□ -1.15
UFD1YGR048W COQ2P32378 372 aa7.86□□□□□ -1.15
UFD1YGR048W LST4P34239 828 aa7.86□□□□□ -1.15
UFD1YGR048W NOP4P37838 685 aaKnown RBP7.86□□□□□ -1.15
UFD1YGR048W AHP1P38013 176 aaKnown RBP7.86□□□□□ -1.15
UFD1YGR048W VMA13P41807 478 aaKnown RBP7.86□□□□□ -1.15
UFD1YGR048W ECM27P47144 725 aa7.86□□□□□ -1.15
UFD1YGR048W PPT1P53043 513 aa7.86□□□□□ -1.15
UFD1YGR048W POP6P53218 158 aa7.86□□□□□ -1.15
UFD1YGR048W SPC98P53540 846 aa7.86□□□□□ -1.15
UFD1YGR048W GPD1Q00055 391 aaKnown RBP7.86□□□□□ -1.15
UFD1YGR048W RNY1Q02933 434 aaKnown RBP7.86□□□□□ -1.15
UFD1YGR048W EFR3Q03653 782 aaKnown RBP7.86□□□□□ -1.15
UFD1YGR048W YML037CQ03703 340 aa7.86□□□□□ -1.15
UFD1YGR048W YLR283WQ05867 314 aa7.86□□□□□ -1.15
UFD1YGR048W ECM38Q05902 660 aaPredicted RBP7.86□□□□□ -1.15
UFD1YGR048W SPH1Q06160 661 aa7.86□□□□□ -1.15
UFD1YGR048W RCL1Q08096 367 aaPredicted RBP7.86□□□□□ -1.15
UFD1YGR048W DSE3Q08729 430 aa7.86□□□□□ -1.15
UFD1YGR048W HAL9Q12180 1030 aa7.86□□□□□ -1.15
UFD1YGR048W YOR019WQ99248 730 aa7.86□□□□□ -1.15
UFD1YGR048W GCN4P03069 281 aa7.85□□□□□ -1.15
UFD1YGR048W LAT1P12695 482 aaKnown RBP7.85□□□□□ -1.15
UFD1YGR048W AAC3P18238 307 aa7.85□□□□□ -1.15
UFD1YGR048W CCA1P21269 546 aa7.85□□□□□ -1.15
UFD1YGR048W PRP28P23394 588 aa7.85□□□□□ -1.15
UFD1YGR048W PGS1P25578 521 aa7.85□□□□□ -1.15
UFD1YGR048W HRR25P29295 494 aaKnown RBP7.85□□□□□ -1.15
UFD1YGR048W YKL077WP36081 392 aa7.85□□□□□ -1.15
UFD1YGR048W POP7P38291 140 aa7.85□□□□□ -1.15
UFD1YGR048W RMD6P39975 231 aa7.85□□□□□ -1.15
UFD1YGR048W UTP25P40498 721 aaKnown RBP7.85□□□□□ -1.15
UFD1YGR048W LSB6P42951 607 aa7.85□□□□□ -1.15
UFD1YGR048W NIT3P49954 291 aa7.85□□□□□ -1.15
UFD1YGR048W IMA1P53051 589 aa7.85□□□□□ -1.15
UFD1YGR048W MRPS16Q02608 121 aa7.85□□□□□ -1.15
UFD1YGR048W SMA1Q02651 245 aa7.85□□□□□ -1.15
UFD1YGR048W YMR209CQ03648 457 aa7.85□□□□□ -1.15
UFD1YGR048W ENT5Q03769 411 aaKnown RBP7.85□□□□□ -1.15
UFD1YGR048W IVY1Q04934 453 aa7.85□□□□□ -1.15
UFD1YGR048W PHM6Q05637 104 aa7.85□□□□□ -1.15
UFD1YGR048W LUC7Q07508 261 aaPredicted RBP7.85□□□□□ -1.15
UFD1YGR048W YOL159C-AQ3E769 90 aa7.85□□□□□ -1.15
UFD1YGR048W UBR1P19812 1950 aa7.84□□□□□ -1.15
UFD1YGR048W APA1P16550 321 aaKnown RBP7.84□□□□□ -1.15
UFD1YGR048W SAT4P25333 603 aaKnown RBP7.84□□□□□ -1.15
UFD1YGR048W PPZ1P26570 692 aa7.84□□□□□ -1.15
UFD1YGR048W NDI1P32340 513 aa7.84□□□□□ -1.15
UFD1YGR048W NDC1P32500 655 aa7.84□□□□□ -1.15
UFD1YGR048W DOA4P32571 926 aa7.84□□□□□ -1.15
UFD1YGR048W FRE1P32791 686 aa7.84□□□□□ -1.15
UFD1YGR048W SKG6P32900 734 aaPredicted RBP7.84□□□□□ -1.15
UFD1YGR048W VPS17P32913 551 aa7.84□□□□□ -1.15
UFD1YGR048W MDL2P33311 773 aa7.84□□□□□ -1.15
UFD1YGR048W SER1P33330 395 aaKnown RBP7.84□□□□□ -1.15
UFD1YGR048W ABZ1P37254 787 aaPredicted RBP7.84□□□□□ -1.15
UFD1YGR048W IST2P38250 946 aa7.84□□□□□ -1.15
UFD1YGR048W COS111P38308 924 aa7.84□□□□□ -1.15
UFD1YGR048W ARG2P40360 574 aa7.84□□□□□ -1.15
UFD1YGR048W CIN1P40987 1014 aa7.84□□□□□ -1.15
UFD1YGR048W ERG10P41338 398 aaKnown RBP7.84□□□□□ -1.15
UFD1YGR048W YJL045WP47052 634 aa7.84□□□□□ -1.15
UFD1YGR048W YJR107WP47145 328 aa7.84□□□□□ -1.15
UFD1YGR048W RTA1P53047 317 aa7.84□□□□□ -1.15
UFD1YGR048W AIM14P53109 570 aa7.84□□□□□ -1.15
UFD1YGR048W CUL3P53202 744 aa7.84□□□□□ -1.15
UFD1YGR048W PBP1P53297 722 aaKnown RBP7.84□□□□□ -1.15
UFD1YGR048W HXT11P54862 567 aa7.84□□□□□ -1.15
UFD1YGR048W YAT1P80235 687 aa7.84□□□□□ -1.15
UFD1YGR048W YPL071CQ02864 156 aa7.84□□□□□ -1.15
UFD1YGR048W UBX5Q06682 500 aa7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms