RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	IMD3	P50095	523 aa	Known RBP	3.23	□□□□□ -1.89
YGR039W	YGR039W	YGL138C	P53122	345 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	HST1	P53685	503 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	KTR5	P53966	522 aa	Predicted RBP	3.23	□□□□□ -1.89
YGR039W	YGR039W	VTC3	Q02725	835 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	SNU56	Q03782	492 aa	Known RBP	3.23	□□□□□ -1.89
YGR039W	YGR039W	GRX3	Q03835	250 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	SPH1	Q06160	661 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	COS7	Q07788	383 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	TEN1	Q07921	160 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	SRL1	Q08673	210 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	CFT2	Q12102	859 aa	Predicted RBP	3.23	□□□□□ -1.89
YGR039W	YGR039W	UBX3	Q12229	455 aa		3.23	□□□□□ -1.89
YGR039W	YGR039W	RPC40	P07703	335 aa	Known RBP	3.22	□□□□□ -1.89
YGR039W	YGR039W	PTC6	P25646	442 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	PPQ1	P32945	549 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	CCT4	P39078	528 aa	Known RBP	3.22	□□□□□ -1.89
YGR039W	YGR039W	CIN4	P39110	191 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	YMR147W	P40218	223 aa	Known RBP	3.22	□□□□□ -1.89
YGR039W	YGR039W	CIN1	P40987	1014 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	RPS10B	P46784	105 aa	Known RBP	3.22	□□□□□ -1.89
YGR039W	YGR039W	MDV1	P47025	714 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	ERG26	P53199	349 aa	Known RBP	3.22	□□□□□ -1.89
YGR039W	YGR039W	YPR003C	P53394	754 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
YGR039W	YGR039W	PPM1	Q04081	328 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	APL5	Q08951	932 aa	Known RBP	3.22	□□□□□ -1.89
YGR039W	YGR039W	VPS54	Q12071	889 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	RRD2	Q12461	358 aa		3.22	□□□□□ -1.89
YGR039W	YGR039W	ARG81	P05085	880 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	CBP1	P07252	654 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	PEP4	P07267	405 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	SPS4	P09937	338 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	PRP2	P20095	876 aa	Predicted RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	DBP3	P20447	523 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	MRPL4	P36517	319 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	RPL32	P38061	130 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	ICS2	P38284	255 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	GDT1	P38301	280 aa	Predicted RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	NTC20	P38302	140 aa	Predicted RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	TOM71	P38825	639 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	WSS1	P38838	269 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	FLO5	P38894	1075 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	FAD1	P38913	306 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	TIF4631	P39935	952 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	YAT2	P40017	923 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	YTA12	P40341	825 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	CDC1	P40986	491 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	ATG27	P46989	271 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	CUE3	P53137	624 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	YNL144C	P53907	740 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	YMR178W	Q03219	274 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	RPN9	Q04062	393 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	ADE13	Q05911	482 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	DCS1	Q06151	350 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	SNA4	Q07549	140 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	NOP6	Q07623	225 aa	Known RBP	3.21	□□□□□ -1.9
YGR039W	YGR039W	NCE102	Q12207	173 aa	RIP-Chip data	3.21	□□□□□ -1.9	not detected
YGR039W	YGR039W	VAM3	Q12241	283 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	MDY2	Q12285	212 aa		3.21	□□□□□ -1.9
YGR039W	YGR039W	RPL6B	P05739	176 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	PUT2	P07275	575 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	SPO7	P18410	259 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	SUI2	P20459	304 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	SPE2	P21182	396 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	CLB2	P24869	491 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	KRE2	P27809	442 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	NIP1	P32497	812 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	SRB2	P34162	210 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	MTR2	P34232	184 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	DBP8	P38719	431 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	ERV46	P39727	415 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	YIL152W	P40455	235 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	VHS2	P40463	436 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	YIR016W	P40572	265 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	ELP2	P42935	788 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	PTR3	P43606	678 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	EFM3	P47163	339 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	YGL108C	P53139	140 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	DRN1	P53255	507 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	YTP1	P53584	459 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	YNL143C	P53908	130 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	RSM23	Q01163	450 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	RPL6A	Q02326	176 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	YMR130W	Q04223	302 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	EMI2	Q04409	500 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	RBA50	Q04418	439 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	YLR455W	Q06188	304 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	THI3	Q07471	609 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	YFH1	Q07540	174 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	RKM1	Q08961	583 aa	Predicted RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	ATX2	Q12067	313 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	AEP3	Q12089	606 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	RTC5	Q12108	567 aa	Known RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	MED2	Q12124	431 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	SFG1	Q12507	346 aa		3.2	□□□□□ -1.9
YGR039W	YGR039W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.2	□□□□□ -1.9
YGR039W	YGR039W	COX3	P00420	269 aa		3.19	□□□□□ -1.9
YGR039W	YGR039W	GAL4	P04386	881 aa		3.19	□□□□□ -1.9
YGR039W	YGR039W	GPH1	P06738	902 aa	Known RBP	3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms