RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XRN1	YGL173C	SNO2	P53823	222 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	RNT1	Q02555	471 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	TPO1	Q07824	586 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	PLP2	Q12017	286 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	NCE102	Q12207	173 aa	RIP-Chip data	3.2	□□□□□ -1.9	not detected
XRN1	YGL173C	INP53	Q12271	1107 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	ADE5,7	P07244	802 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	TIF3	P34167	436 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	YHL017W	P38745	532 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	STN1	P38960	494 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	GPB2	P39717	880 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	GET2	P40056	285 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	ASG1	P40467	964 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	TED1	P40533	473 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	HAM1	P47119	197 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	BPL1	P48445	690 aa	Predicted RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	KAP114	P53067	1004 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	MNP1	P53163	194 aa	Predicted RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	NUP53	Q03790	475 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	BUD22	Q04347	519 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	ENT4	Q07872	247 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	DCI1	Q08558	271 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	FRE6	Q12473	712 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	DCP1	Q12517	231 aa	Predicted RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	RPO41	P13433	1351 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	VMA16	P23968	213 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	APE3	P37302	537 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	REG2	P38232	338 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	ELO3	P40319	345 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	LYS14	P40971	790 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	CIN1	P40987	1014 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	SWP82	P43554	623 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	MDE1	P47095	244 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	MSC1	Q03104	513 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	SHS1	Q07657	551 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	AAD15	Q08361	143 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	SGT1	Q08446	395 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	TMA16	Q08687	178 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	BUD7	Q08754	746 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	YRM1	Q12340	786 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	ARD1	P07347	238 aa	Predicted RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	YAL037W	P39728	267 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	PFK26	P40433	827 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	TFG2	P41896	400 aa	Predicted RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	ZIM17	P42844	174 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	TDA10	P42938	290 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	AGX1	P43567	385 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
XRN1	YGL173C	IDS2	P46958	469 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	ATG27	P46989	271 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	EMC2	P47133	292 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	RMD9	P53140	646 aa	Known RBP	3.2	□□□□□ -1.9
XRN1	YGL173C	CGR1	P53188	120 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	YMR209C	Q03648	457 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	YPR196W	Q06595	470 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	YPR078C	Q06813	372 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	CTF3	Q12748	733 aa		3.2	□□□□□ -1.9
XRN1	YGL173C	TAT1	P38085	619 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ATM1	P40416	690 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	YIR007W	P40566	764 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	PAC11	P40960	533 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	NRG1	Q03125	231 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	PPM1	Q04081	328 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	YLR173W	Q06247	608 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ATG26	Q06321	1198 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	CSM4	Q08955	156 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ALG6	Q12001	544 aa	Known RBP	3.19	□□□□□ -1.9
XRN1	YGL173C	YDR262W	Q12331	272 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	AFI1	Q99222	893 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	TDH1	P00360	332 aa	Known RBP	3.19	□□□□□ -1.9
XRN1	YGL173C	RPL24A	P04449	155 aa	Known RBP	3.19	□□□□□ -1.9
XRN1	YGL173C	RAD24	P32641	659 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	TSC10	P38342	320 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	LSB1	P53281	241 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	RGC1	Q06108	1083 aa	Known RBP	3.19	□□□□□ -1.9
XRN1	YGL173C	YDL242W	Q07746	117 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	COX17	Q12287	69 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	SWM1	Q12379	170 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	SUC2	P00724	532 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ARG81	P05085	880 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	HNM1	P19807	563 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	DCC1	P25559	380 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	YCL068C	P25593	260 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	YBR053C	P38235	358 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	MPS2	P53159	387 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ART5	P53244	586 aa	Known RBP	3.19	□□□□□ -1.9
XRN1	YGL173C	RTT102	P53330	157 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	YOR352W	Q08816	343 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ABF1	P14164	731 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	KSS1	P14681	368 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	RPS5	P26783	225 aa	Known RBP	3.19	□□□□□ -1.9
XRN1	YGL173C	TOA2	P32774	122 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	YME1	P32795	747 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	VPS17	P32913	551 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ARP1	P38696	384 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	GAT2	P40209	560 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	BUL1	P48524	976 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	INP52	P50942	1183 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	YNL092W	P53934	400 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	SNZ1	Q03148	297 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms