RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C KRE29P40026 464 aa10.32□□□□□ -0.76
CCA1YER168C PSP1P50896 841 aaKnown RBP10.32□□□□□ -0.76
CCA1YER168C YPL034WQ03083 165 aa10.32□□□□□ -0.76
CCA1YER168C TFB3Q03290 321 aa10.32□□□□□ -0.76
CCA1YER168C PPN1Q04119 674 aa10.32□□□□□ -0.76
CCA1YER168C ENT2Q05785 613 aa10.32□□□□□ -0.76
CCA1YER168C YLL007CQ07799 665 aa10.32□□□□□ -0.76
CCA1YER168C YOL131WQ08270 108 aa10.32□□□□□ -0.76
CCA1YER168C MHT1Q12525 324 aa10.32□□□□□ -0.76
CCA1YER168C MED11Q99278 115 aa10.32□□□□□ -0.76
CCA1YER168C PRT1P06103 763 aaKnown RBP10.31□□□□□ -0.76
CCA1YER168C PPH22P23595 377 aa10.31□□□□□ -0.76
CCA1YER168C PPZ1P26570 692 aa10.31□□□□□ -0.76
CCA1YER168C LIP5P32875 414 aa10.31□□□□□ -0.76
CCA1YER168C BMT2P38278 337 aa10.31□□□□□ -0.76
CCA1YER168C YHR020WP38708 688 aaKnown RBP10.31□□□□□ -0.76
CCA1YER168C ATP22P50273 684 aaPredicted RBP10.31□□□□□ -0.76
CCA1YER168C SPC105P53148 917 aa10.31□□□□□ -0.76
CCA1YER168C YPL014WQ02606 381 aa10.31□□□□□ -0.76
CCA1YER168C MET31Q03081 177 aa10.31□□□□□ -0.76
CCA1YER168C RSC3Q06639 885 aa10.31□□□□□ -0.76
CCA1YER168C NTG2Q08214 380 aa10.31□□□□□ -0.76
CCA1YER168C MCD1Q12158 566 aa10.31□□□□□ -0.76
CCA1YER168C MNL2Q12205 849 aa10.31□□□□□ -0.76
CCA1YER168C YOR012WQ12351 137 aa10.31□□□□□ -0.76
CCA1YER168C YCL012CQ8J0M4 134 aa10.31□□□□□ -0.76
CCA1YER168C MDM12Q92328 271 aa10.31□□□□□ -0.76
CCA1YER168C TY4B-PA0A0B7P3V8 1104 aa10.3□□□□□ -0.76
CCA1YER168C GPH1P06738 902 aaKnown RBP10.3□□□□□ -0.76
CCA1YER168C MRPL6P32904 214 aa10.3□□□□□ -0.76
CCA1YER168C YCR087C-AP37263 153 aa10.3□□□□□ -0.76
CCA1YER168C UBA4P38820 440 aa10.3□□□□□ -0.76
CCA1YER168C AIM23P47015 356 aa10.3□□□□□ -0.76
CCA1YER168C YJR124CP47159 448 aa10.3□□□□□ -0.76
CCA1YER168C MNT2P53059 558 aa10.3□□□□□ -0.76
CCA1YER168C SLD3P53135 668 aa10.3□□□□□ -0.76
CCA1YER168C NPL3Q01560 414 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
CCA1YER168C RSM24Q03976 319 aa10.3□□□□□ -0.76
CCA1YER168C GPI17Q04080 534 aa10.3□□□□□ -0.76
CCA1YER168C THP1Q08231 455 aa10.3□□□□□ -0.76
CCA1YER168C YPL245WQ12179 454 aaKnown RBP10.3□□□□□ -0.76
CCA1YER168C YOR338WQ99326 363 aa10.3□□□□□ -0.76
CCA1YER168C MET17P06106 444 aa10.29□□□□□ -0.76
CCA1YER168C PRI2P20457 528 aa10.29□□□□□ -0.76
CCA1YER168C PEX1P24004 1043 aa10.29□□□□□ -0.76
CCA1YER168C YPK3P38070 525 aa10.29□□□□□ -0.76
CCA1YER168C PCF11P39081 626 aaPredicted RBP10.29□□□□□ -0.76
CCA1YER168C FAF1P40546 346 aaPredicted RBP10.29□□□□□ -0.76
CCA1YER168C REF2P42073 533 aaPredicted RBP10.29□□□□□ -0.76
CCA1YER168C STB1P42845 420 aa10.29□□□□□ -0.76
CCA1YER168C PRM1P53835 661 aa10.29□□□□□ -0.76
CCA1YER168C IRC15Q02733 499 aa10.29□□□□□ -0.76
CCA1YER168C FMP45Q07651 309 aa10.29□□□□□ -0.76
CCA1YER168C BUD7Q08754 746 aa10.29□□□□□ -0.76
CCA1YER168C YDR056CQ12025 205 aa10.29□□□□□ -0.76
CCA1YER168C UBR1P19812 1950 aa10.29□□□□□ -0.76
CCA1YER168C MSF1P08425 469 aa10.29□□□□□ -0.76
CCA1YER168C KAR1P11927 433 aa10.29□□□□□ -0.76
CCA1YER168C RSR1P13856 272 aa10.29□□□□□ -0.76
CCA1YER168C NUP2P32499 720 aa10.29□□□□□ -0.76
CCA1YER168C YBR139WP38109 508 aa10.29□□□□□ -0.76
CCA1YER168C PCL5P38794 229 aa10.29□□□□□ -0.76
CCA1YER168C PEX18P38855 283 aa10.29□□□□□ -0.76
CCA1YER168C RPH1P39956 796 aa10.29□□□□□ -0.76
CCA1YER168C UTP18P40362 594 aaPredicted RBP10.29□□□□□ -0.76
CCA1YER168C FAR7P43592 221 aa10.29□□□□□ -0.76
CCA1YER168C ESF2P53743 316 aaKnown RBP10.29□□□□□ -0.76
CCA1YER168C EMI2Q04409 500 aaKnown RBP10.29□□□□□ -0.76
CCA1YER168C APC4Q04601 652 aa10.29□□□□□ -0.76
CCA1YER168C CIA1Q05583 330 aa10.29□□□□□ -0.76
CCA1YER168C BSC2Q05611 235 aa10.29□□□□□ -0.76
CCA1YER168C SWA2Q06677 668 aa10.29□□□□□ -0.76
CCA1YER168C YOR389WQ08912 624 aa10.29□□□□□ -0.76
CCA1YER168C GTT2Q12390 233 aa10.29□□□□□ -0.76
CCA1YER168C STE3P06783 470 aa10.28□□□□□ -0.76
CCA1YER168C MET8P15807 274 aa10.28□□□□□ -0.76
CCA1YER168C SGV1P23293 657 aaKnown RBP10.28□□□□□ -0.76
CCA1YER168C PRP21P32524 280 aaPredicted RBP10.28□□□□□ -0.76
CCA1YER168C SPS19P32573 292 aaKnown RBP10.28□□□□□ -0.76
CCA1YER168C SEC17P32602 292 aa10.28□□□□□ -0.76
CCA1YER168C SRL3P36167 246 aa10.28□□□□□ -0.76
CCA1YER168C MTG2P38860 518 aa10.28□□□□□ -0.76
CCA1YER168C SSN3P39073 555 aa10.28□□□□□ -0.76
CCA1YER168C YAR028WP39548 234 aa10.28□□□□□ -0.76
CCA1YER168C MMF1P40185 145 aaKnown RBP10.28□□□□□ -0.76
CCA1YER168C SWP82P43554 623 aa10.28□□□□□ -0.76
CCA1YER168C HST3P53687 447 aa10.28□□□□□ -0.76
CCA1YER168C ARR1Q06596 294 aa10.28□□□□□ -0.76
CCA1YER168C TGL5Q12043 749 aa10.28□□□□□ -0.76
CCA1YER168C SMF3Q12078 473 aaPredicted RBP10.28□□□□□ -0.76
CCA1YER168C YPL119C-AQ3E751 87 aa10.28□□□□□ -0.76
CCA1YER168C RIB3Q99258 208 aa10.28□□□□□ -0.76
CCA1YER168C REP1P03871 373 aa10.27□□□□□ -0.77
CCA1YER168C ATP4P05626 244 aa10.27□□□□□ -0.77
CCA1YER168C GAL3P13045 520 aa10.27□□□□□ -0.77
CCA1YER168C APA1P16550 321 aaKnown RBP10.27□□□□□ -0.77
CCA1YER168C SLX5P32828 619 aaKnown RBP10.27□□□□□ -0.77
CCA1YER168C SOL2P37262 315 aa10.27□□□□□ -0.77
CCA1YER168C ATG7P38862 630 aa10.27□□□□□ -0.77
CCA1YER168C SOP4P39543 234 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms