RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	CIN1	P40987	1014 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	YGR126W	P53274	230 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	LSC1	P53598	329 aa	Known RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	KTR5	P53966	522 aa	Predicted RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	SMA1	Q02651	245 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	YDR541C	Q03049	344 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	YMR178W	Q03219	274 aa	Known RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	WAR1	Q03631	944 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	EMI2	Q04409	500 aa	Known RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	GFD1	Q04839	188 aa	Known RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	HRD3	Q05787	833 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	ARO10	Q06408	635 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	ECM30	Q06673	1274 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	RPS10A	Q08745	105 aa	Predicted RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	LEA1	Q08963	238 aa	Predicted RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	AHA1	Q12449	350 aa	Known RBP	3.19	□□□□□ -1.9
SMT3	YDR510W	ZPS1	Q12512	249 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	SRN2	Q99176	213 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	RAV1	P47104	1357 aa		3.19	□□□□□ -1.9
SMT3	YDR510W	YMR085W	P0CF18	432 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	RAP1	P11938	827 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	PET123	P17558	318 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	PRP6	P19735	899 aa	Predicted RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	SAG1	P20840	650 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	STE11	P23561	717 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	ERG4	P25340	473 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	PET18	P25362	215 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	PMI40	P29952	429 aa	Known RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	MRPL9	P31334	269 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	NTG1	P31378	399 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	YBR139W	P38109	508 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	OLA1	P38219	394 aa	Known RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	VHC1	P38329	1120 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	PCA1	P38360	1216 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	ANS1	P38832	159 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	KEL1	P38853	1164 aa	Known RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	YHR210C	P38893	341 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	YMR147W	P40218	223 aa	Known RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	LOC1	P43586	204 aa	Predicted RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	RPS10B	P46784	105 aa	Known RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	ASN2	P49090	572 aa	Known RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	ROG1	P53118	685 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	LSB1	P53281	241 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	RSM23	Q01163	450 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	EKI1	Q03764	534 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	YLR297W	Q05899	129 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	ADE13	Q05911	482 aa	Known RBP	3.18	□□□□□ -1.9
SMT3	YDR510W	ULA1	Q12059	462 aa		3.18	□□□□□ -1.9
SMT3	YDR510W	COX3	P00420	269 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	PEP4	P07267	405 aa	Known RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	ALG7	P07286	448 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	CHO1	P08456	276 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	ALG1	P16661	449 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	SGV1	P23293	657 aa	Known RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	RHB1	P25378	209 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	DMC1	P25453	334 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	SIN4	P32259	974 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
SMT3	YDR510W	MRP4	P32902	394 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	RPT5	P33297	434 aa	Known RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	MTR2	P34232	184 aa	Known RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	PTK1	P36002	662 aa	Predicted RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	GMH1	P36125	273 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	EFM2	P38347	419 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	TOM71	P38825	639 aa	Known RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	MNL1	P38888	796 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	ARG2	P40360	574 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	AIM20	P40451	204 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	ULP2	P40537	1034 aa	Predicted RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	GCD14	P46959	383 aa	Predicted RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	LIA1	P47120	325 aa	Known RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	PNC1	P53184	216 aa	Known RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	RNT1	Q02555	471 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	PFA5	Q03289	374 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	SMA2	Q04658	369 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	STE23	Q06010	1027 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	YPR172W	Q06608	200 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	IPK1	Q06667	281 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	POS5	Q06892	414 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	YDL057W	Q07379	328 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	RKM1	Q08961	583 aa	Predicted RBP	3.17	□□□□□ -1.9
SMT3	YDR510W	TY3A-G	Q12173	290 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	RRD2	Q12461	358 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	TY3A-I	Q99219	290 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	RTC1	Q08281	1341 aa		3.17	□□□□□ -1.9
SMT3	YDR510W	STE2	D6VTK4	431 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	SCEI	P03882	235 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	ADE5,7	P07244	802 aa	Known RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	ERG11	P10614	530 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	MRP2	P10663	115 aa	Predicted RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	UNG1	P12887	359 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	GAL3	P13045	520 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	ATP10	P18496	279 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	HMX1	P32339	317 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	TRM2	P33753	639 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	SHP1	P34223	423 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	TPO5	P36029	618 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	MRPL37	P36532	105 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	AIM3	P38266	947 aa	Known RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	PEX18	P38855	283 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms