RNA–Protein interactions for RNA: YDR478W

SNM1, Transcript of Ribonuclease MRP complex subunit, yeast

Gene SNM1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNM1	YDR478W	CTF4	Q01454	927 aa		4.99	□□□□□ -1.61
SNM1	YDR478W	DBP9	Q06218	594 aa	Known RBP	4.99	□□□□□ -1.61
SNM1	YDR478W	GLK1	P17709	500 aa	Known RBP	4.98	□□□□□ -1.61
SNM1	YDR478W	KRE2	P27809	442 aa		4.98	□□□□□ -1.61
SNM1	YDR478W	BEM1	P29366	551 aa		4.98	□□□□□ -1.61
SNM1	YDR478W	ZTA1	P38230	334 aa	Known RBP	4.98	□□□□□ -1.61
SNM1	YDR478W	FET5	P43561	622 aa		4.98	□□□□□ -1.61
SNM1	YDR478W	TOM22	P49334	152 aa		4.98	□□□□□ -1.61
SNM1	YDR478W	SMM1	P53720	384 aa	Known RBP	4.98	□□□□□ -1.61
SNM1	YDR478W	SHR3	Q02774	210 aa		4.98	□□□□□ -1.61
SNM1	YDR478W	RDR1	Q08904	546 aa		4.98	□□□□□ -1.61
SNM1	YDR478W	HER1	Q12276	1246 aa		4.98	□□□□□ -1.61
SNM1	YDR478W	RIP1	P08067	215 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	TYR1	P20049	452 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	CBP4	P37267	147 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	TCM62	P38228	572 aa	Known RBP	4.97	□□□□□ -1.61
SNM1	YDR478W	RRF1	P38771	230 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	YER130C	P39959	443 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	VHS2	P40463	436 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	CHS6	P40955	746 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	BPL1	P48445	690 aa	Predicted RBP	4.97	□□□□□ -1.61
SNM1	YDR478W	PDR16	P53860	351 aa	Known RBP	4.97	□□□□□ -1.61
SNM1	YDR478W	OCA2	P53949	197 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	RPN9	Q04062	393 aa	Known RBP	4.97	□□□□□ -1.61
SNM1	YDR478W	MCP2	Q06567	569 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	IRC10	Q08118	586 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	NCE102	Q12207	173 aa	RIP-Chip data	4.97	□□□□□ -1.61	not detected
SNM1	YDR478W	PSY3	Q12318	242 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	YLR111W	Q12528	110 aa		4.97	□□□□□ -1.61
SNM1	YDR478W	PEP5	P12868	1029 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	SGV1	P23293	657 aa	Known RBP	4.96	□□□□□ -1.62
SNM1	YDR478W	MRPL4	P36517	319 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	ARP1	P38696	384 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	LAG1	P38703	411 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	YIL060W	P40519	144 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	YJR154W	P47181	346 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	ZPR1	P53303	486 aa	Known RBP	4.96	□□□□□ -1.62
SNM1	YDR478W	VTI1	Q04338	217 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	MGR3	Q04472	501 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	ARP10	Q04549	284 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	SPH1	Q06160	661 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	YOR365C	Q08844	703 aa		4.96	□□□□□ -1.62
SNM1	YDR478W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SNM1	YDR478W	TY1B-A	O13527	1196 aa	Known RBP	4.95	□□□□□ -1.62
SNM1	YDR478W	CAR1	P00812	333 aa	Known RBP	4.95	□□□□□ -1.62
SNM1	YDR478W	YMR085W	P0CF18	432 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	PMR1	P13586	950 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	ATP10	P18496	279 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	HOT13	P36078	116 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	PFF1	P38244	976 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	EFM2	P38347	419 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	VRG4	P40107	337 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	YIL089W	P40500	205 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	NAS2	P40555	220 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	POP1	P41812	875 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	IRC7	P43623	340 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	CUE3	P53137	624 aa	Known RBP	4.95	□□□□□ -1.62
SNM1	YDR478W	EAF7	P53911	425 aa	Known RBP	4.95	□□□□□ -1.62
SNM1	YDR478W	SMA1	Q02651	245 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	YFH1	Q07540	174 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	YDL218W	Q07629	317 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	PML1	Q07930	204 aa	Predicted RBP	4.95	□□□□□ -1.62
SNM1	YDR478W	PFA4	Q12006	378 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	NBL1	Q3E7Y6	73 aa		4.95	□□□□□ -1.62
SNM1	YDR478W	RAD52	P06778	471 aa	Known RBP	4.94	□□□□□ -1.62
SNM1	YDR478W	DAP2	P18962	818 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	CNA1	P23287	553 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	RHB1	P25378	209 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	ADY2	P25613	283 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	SPC110	P32380	944 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	MSN2	P33748	704 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	MLH1	P38920	769 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	TFG2	P41896	400 aa	Predicted RBP	4.94	□□□□□ -1.62
SNM1	YDR478W	TAX4	P47030	604 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	SLI1	P53304	468 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	SOL4	P53315	255 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	CWC22	P53333	577 aa	Known RBP	4.94	□□□□□ -1.62
SNM1	YDR478W	COP1	P53622	1201 aa	Known RBP	4.94	□□□□□ -1.62
SNM1	YDR478W	ATP23	P53722	227 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	YNR068C	P53754	272 aa		4.94	□□□□□ -1.62
SNM1	YDR478W	CTL1	Q03220	320 aa	Known RBP	4.94	□□□□□ -1.62
SNM1	YDR478W	RKM1	Q08961	583 aa	Predicted RBP	4.94	□□□□□ -1.62
SNM1	YDR478W	EDE1	P34216	1381 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	URE2	P23202	354 aa	Known RBP	4.93	□□□□□ -1.62
SNM1	YDR478W	COQ3	P27680	312 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	SNC1	P31109	117 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	SIN4	P32259	974 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	RIM1	P32445	135 aa	Known RBP	4.93	□□□□□ -1.62
SNM1	YDR478W	ASC1	P38011	319 aa	Known RBP	4.93	□□□□□ -1.62
SNM1	YDR478W	DUG2	P38149	878 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	OLA1	P38219	394 aa	Known RBP	4.93	□□□□□ -1.62
SNM1	YDR478W	PHO90	P39535	881 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	PCL7	P40186	285 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	SHE4	P51534	789 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	BUD32	P53323	261 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	SSK1	Q07084	712 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	UBX3	Q12229	455 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	RRI1	Q12468	440 aa		4.93	□□□□□ -1.62
SNM1	YDR478W	YPR089W	O13585	888 aa		4.92	□□□□□ -1.62
SNM1	YDR478W	SCEI	P03882	235 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms