RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	ERG1	P32476	496 aa	Known RBP	4.03	□□□□□ -1.76
HIM1	YDR317W	SPC34	P36131	295 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	KRE9	P39005	276 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	VAB2	P40003	282 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	YMR147W	P40218	223 aa	Known RBP	4.03	□□□□□ -1.76
HIM1	YDR317W	YJL070C	P40361	888 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	DUG3	P53871	357 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	RSM23	Q01163	450 aa		4.03	□□□□□ -1.76
HIM1	YDR317W	MRD1	Q06106	887 aa	Known RBP	4.03	□□□□□ -1.76
HIM1	YDR317W	CHS3	P29465	1165 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	SYN8	P31377	255 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	PRO3	P32263	286 aa	Known RBP	4.02	□□□□□ -1.77
HIM1	YDR317W	MCM10	P32354	571 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	YKL100C	P34248	587 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	CST26	P38226	397 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	YEL068C	P39977	110 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	AXL1	P40851	1208 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	MEP3	P53390	489 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	YSA1	Q01976	231 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	YVH1	Q02256	364 aa	Known RBP	4.02	□□□□□ -1.77
HIM1	YDR317W	DIC1	Q06143	298 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	YEH2	Q07950	538 aa		4.02	□□□□□ -1.77
HIM1	YDR317W	CDC16	P09798	840 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	PMS1	P14242	873 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	KGD1	P20967	1014 aa	Known RBP	4.01	□□□□□ -1.77
HIM1	YDR317W	BOS1	P25385	244 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	YIH1	P25637	258 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	ATS1	P31386	333 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	ACH1	P32316	526 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	LAG1	P38703	411 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	DIM1	P41819	318 aa	Known RBP	4.01	□□□□□ -1.77
HIM1	YDR317W	PYK2	P52489	506 aa	Known RBP	4.01	□□□□□ -1.77
HIM1	YDR317W	TDA7	P53882	636 aa	Predicted RBP	4.01	□□□□□ -1.77
HIM1	YDR317W	YML037C	Q03703	340 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	MSS11	Q03825	758 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	YMR087W	Q04299	284 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	NKP2	Q06162	153 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	SDH5	Q08230	162 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	CFT2	Q12102	859 aa	Predicted RBP	4.01	□□□□□ -1.77
HIM1	YDR317W	YBR126W-A	Q8TGU7	68 aa		4.01	□□□□□ -1.77
HIM1	YDR317W	MF(ALPHA)1	P01149	165 aa		4	□□□□□ -1.77
HIM1	YDR317W	YML002W	P0CF17	737 aa		4	□□□□□ -1.77
HIM1	YDR317W	TPM1	P17536	199 aa	Known RBP	4	□□□□□ -1.77
HIM1	YDR317W	TYR1	P20049	452 aa		4	□□□□□ -1.77
HIM1	YDR317W	OPI1	P21957	404 aa		4	□□□□□ -1.77
HIM1	YDR317W	IMG1	P25626	169 aa		4	□□□□□ -1.77
HIM1	YDR317W	CDC60	P26637	1090 aa	Known RBP	4	□□□□□ -1.77
HIM1	YDR317W	SMM1	P53720	384 aa	Known RBP	4	□□□□□ -1.77
HIM1	YDR317W	FMP40	Q08968	688 aa	Predicted RBP	4	□□□□□ -1.77
HIM1	YDR317W	TY3A-G	Q12173	290 aa		4	□□□□□ -1.77
HIM1	YDR317W	TY3A-I	Q99219	290 aa		4	□□□□□ -1.77
HIM1	YDR317W	ARD1	P07347	238 aa	Predicted RBP	3.99	□□□□□ -1.77
HIM1	YDR317W	COQ1	P18900	473 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	YCK1	P23291	538 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	BUD5	P25300	642 aa	Predicted RBP	3.99	□□□□□ -1.77
HIM1	YDR317W	POL4	P25615	582 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	VPS17	P32913	551 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	PES4	P39684	611 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	VID27	P40157	782 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	PIB2	P53191	635 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	EFM6	P53970	246 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	PDH1	Q12428	516 aa	Known RBP	3.99	□□□□□ -1.77
HIM1	YDR317W	NOP58	Q12499	511 aa	Known RBP	3.99	□□□□□ -1.77
HIM1	YDR317W	RAD61	Q99359	647 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	FLO1	P32768	1537 aa		3.99	□□□□□ -1.77
HIM1	YDR317W	RAD50	P12753	1312 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	PRP16	P15938	1071 aa	Predicted RBP	3.98	□□□□□ -1.77
HIM1	YDR317W	VMA2	P16140	517 aa	Known RBP	3.98	□□□□□ -1.77
HIM1	YDR317W	KAR3	P17119	729 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	SEC62	P21825	274 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	PAH1	P32567	862 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	YBL055C	P34220	418 aa	Predicted RBP	3.98	□□□□□ -1.77
HIM1	YDR317W	YKL023W	P36103	277 aa	Known RBP	3.98	□□□□□ -1.77
HIM1	YDR317W	RPL32	P38061	130 aa	Known RBP	3.98	□□□□□ -1.77
HIM1	YDR317W	YTA12	P40341	825 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	TMA108	P40462	946 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	YPL014W	Q02606	381 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	SHR3	Q02774	210 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	GLO2	Q05584	274 aa		3.98	□□□□□ -1.77
HIM1	YDR317W	LUC7	Q07508	261 aa	Predicted RBP	3.98	□□□□□ -1.77
HIM1	YDR317W	SEC53	P07283	254 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	RPL19A	P0CX82	189 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	RPL19B	P0CX83	189 aa	Predicted RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	PUP3	P25451	205 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	SSE2	P32590	693 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	YBR144C	P34215	104 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	MTR2	P34232	184 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
HIM1	YDR317W	UBP11	P36026	717 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	MUD2	P36084	527 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	VPS45	P38932	577 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	DHH1	P39517	506 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	TIF4631	P39935	952 aa	Known RBP	3.97	□□□□□ -1.77
HIM1	YDR317W	LCL3	P53153	274 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	YGR126W	P53274	230 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	YPL272C	Q08984	517 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	RIM20	Q12033	661 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	YBR298C-A	Q8TGK4	73 aa		3.97	□□□□□ -1.77
HIM1	YDR317W	GFD2	P25370	566 aa	Known RBP	3.96	□□□□□ -1.78
HIM1	YDR317W	SAC6	P32599	642 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms