RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	PCA1	P38360	1216 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	UBA4	P38820	440 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	RTT105	P40063	208 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	HXT9	P40885	567 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	RPS0B	P46654	252 aa	Known RBP	2.77	□□□□□ -1.97
TFB1	YDR311W	TOM22	P49334	152 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	PKP2	P53170	491 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	BUD32	P53323	261 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	AQR1	P53943	586 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	ULA1	Q12059	462 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	RTC5	Q12108	567 aa	Known RBP	2.77	□□□□□ -1.97
TFB1	YDR311W	HER1	Q12276	1246 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	COX3	P00420	269 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	ATP10	P18496	279 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	BEM1	P29366	551 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	MCM4	P30665	933 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	RPC34	P32910	317 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	SHP1	P34223	423 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	OCT1	P35999	772 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	MMS4	P38257	691 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	VHC1	P38329	1120 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	SNG1	P46950	547 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	EFM3	P47163	339 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	ZPR1	P53303	486 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	HST1	P53685	503 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	DUG3	P53871	357 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	YNL143C	P53908	130 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	ERV25	P54837	211 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	YVH1	Q02256	364 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	RPN9	Q04062	393 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	PIG1	Q06216	648 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	APL5	Q08951	932 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	MTR10	Q99189	972 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	CAR1	P00812	333 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	BI2	P03873	423 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	GPH1	P06738	902 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	SEC63	P14906	663 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	TAL1	P15019	335 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	DBP3	P20447	523 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	UBA1	P22515	1024 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	GSY2	P27472	705 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	SIN4	P32259	974 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	MSS51	P32335	436 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	RIM1	P32445	135 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	RIB7	P33312	244 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	MSN2	P33748	704 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	YHR210C	P38893	341 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	SYG1	P40528	902 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	ALK1	P43633	760 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	ORC5	P50874	479 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	YIP5	P53108	310 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	VTC3	Q02725	835 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	SNU56	Q03782	492 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	TMN2	Q04562	672 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	PDR8	Q06149	701 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	MLH2	Q07980	695 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	MCH4	Q08268	501 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	YOR365C	Q08844	703 aa		2.76	□□□□□ -1.97
TFB1	YDR311W	RDL1	Q12305	139 aa	Known RBP	2.76	□□□□□ -1.97
TFB1	YDR311W	RHO2	P06781	192 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	STE3	P06783	470 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	SCH9	P11792	824 aa	Known RBP	2.75	□□□□□ -1.97
TFB1	YDR311W	RHB1	P25378	209 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	PHO91	P27514	894 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	SRB2	P34162	210 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	ROT2	P38138	954 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	BNA4	P38169	460 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	RFC3	P38629	340 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	VPS41	P38959	992 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	YDR089W	P38966	869 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	ELP2	P42935	788 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	GND2	P53319	492 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
TFB1	YDR311W	POS5	Q06892	414 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	RKM1	Q08961	583 aa	Predicted RBP	2.75	□□□□□ -1.97
TFB1	YDR311W	MED2	Q12124	431 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	SFG1	Q12507	346 aa		2.75	□□□□□ -1.97
TFB1	YDR311W	YPR089W	O13585	888 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	MES1	P00958	751 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	PDE2	P06776	526 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	ALG1	P16661	449 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	KRE2	P27809	442 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	NIP1	P32497	812 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	PRP21	P32524	280 aa	Predicted RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	ARN1	P38731	627 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	CCT2	P39076	527 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	YMR124W	P39523	943 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	ROG1	P53118	685 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	CWC22	P53333	577 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	SMM1	P53720	384 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	EAF7	P53911	425 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	UTP6	Q02354	440 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	RBA50	Q04418	439 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	MGR3	Q04472	501 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	PHO92	Q06390	306 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	RLP24	Q07915	199 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	PFA4	Q12006	378 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	YLR111W	Q12528	110 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	PMR1	P13586	950 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	CDC43	P18898	376 aa		2.74	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms