RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C ERP2P39704 215 aa1.77□□□□□ -2.13
SWI5YDR146C SYG1P40528 902 aa1.77□□□□□ -2.13
SWI5YDR146C DOT5P40553 215 aa1.77□□□□□ -2.13
SWI5YDR146C YGR250CP53316 781 aaKnown RBP1.77□□□□□ -2.13
SWI5YDR146C MRPL19P53875 158 aa1.77□□□□□ -2.13
SWI5YDR146C KTR5P53966 522 aaPredicted RBP1.77□□□□□ -2.13
SWI5YDR146C MDM1Q01846 1127 aa1.77□□□□□ -2.13
SWI5YDR146C RPT6Q01939 405 aaKnown RBP1.77□□□□□ -2.13
SWI5YDR146C IVY1Q04934 453 aa1.77□□□□□ -2.13
SWI5YDR146C TSR2Q06672 205 aaKnown RBP1.77□□□□□ -2.13
SWI5YDR146C GLK1P17709 500 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C PAP1P29468 568 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C RRP3P38712 501 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C RPH1P39956 796 aa1.76□□□□□ -2.13
SWI5YDR146C HAT2P39984 401 aa1.76□□□□□ -2.13
SWI5YDR146C ARF3P40994 183 aaRIP-Chip data1.76□□□□□ -2.13not detected
SWI5YDR146C YGL108CP53139 140 aa1.76□□□□□ -2.13
SWI5YDR146C YGL082WP53155 381 aa1.76□□□□□ -2.13
SWI5YDR146C CAF130P53280 1122 aaPredicted RBP1.76□□□□□ -2.13
SWI5YDR146C ZPR1P53303 486 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C GPI1P53306 609 aa1.76□□□□□ -2.13
SWI5YDR146C CRZ1P53968 678 aa1.76□□□□□ -2.13
SWI5YDR146C PDS5Q04264 1277 aa1.76□□□□□ -2.13
SWI5YDR146C MRPL51Q06090 140 aaPredicted RBP1.76□□□□□ -2.13
SWI5YDR146C AYT1Q12226 474 aa1.76□□□□□ -2.13
SWI5YDR146C RTN2Q12443 393 aa1.76□□□□□ -2.13
SWI5YDR146C YOL159C-AQ3E769 90 aa1.76□□□□□ -2.13
SWI5YDR146C RAV1P47104 1357 aa1.76□□□□□ -2.13
SWI5YDR146C MES1P00958 751 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C HEM2P05373 342 aa1.76□□□□□ -2.13
SWI5YDR146C BUB3P26449 341 aa1.76□□□□□ -2.13
SWI5YDR146C NFU1P32860 256 aa1.76□□□□□ -2.13
SWI5YDR146C PMT1P33775 817 aa1.76□□□□□ -2.13
SWI5YDR146C MTC4P38335 694 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C MDM31P38880 579 aa1.76□□□□□ -2.13
SWI5YDR146C KRE9P39005 276 aa1.76□□□□□ -2.13
SWI5YDR146C LSM5P40089 93 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C FAU1P40099 211 aa1.76□□□□□ -2.13
SWI5YDR146C GCD10P41814 478 aa1.76□□□□□ -2.13
SWI5YDR146C HXT14P42833 540 aa1.76□□□□□ -2.13
SWI5YDR146C SRB7P47822 140 aa1.76□□□□□ -2.13
SWI5YDR146C YGL260WP53056 76 aa1.76□□□□□ -2.13
SWI5YDR146C RPA49Q01080 415 aaPredicted RBP1.76□□□□□ -2.13
SWI5YDR146C YDR239CQ03780 787 aa1.76□□□□□ -2.13
SWI5YDR146C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SWI5YDR146C LSP1Q12230 341 aaKnown RBP1.76□□□□□ -2.13
SWI5YDR146C SCM3Q12334 223 aa1.76□□□□□ -2.13
SWI5YDR146C ATR1P13090 542 aa1.75□□□□□ -2.13
SWI5YDR146C MTF1P14908 341 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C HXT3P32466 567 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C PTR2P32901 601 aa1.75□□□□□ -2.13
SWI5YDR146C YFR016CP43597 1233 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C GWT1P47026 490 aa1.75□□□□□ -2.13
SWI5YDR146C TLG2Q08144 397 aa1.75□□□□□ -2.13
SWI5YDR146C PPT2Q12036 173 aa1.75□□□□□ -2.13
SWI5YDR146C SET6Q12529 373 aa1.75□□□□□ -2.13
SWI5YDR146C BRR1Q99177 341 aaPredicted RBP1.75□□□□□ -2.13
SWI5YDR146C ISN1Q99312 450 aa1.75□□□□□ -2.13
SWI5YDR146C CAR1P00812 333 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C PUT3P25502 979 aaPredicted RBP1.75□□□□□ -2.13
SWI5YDR146C SPB1P25582 841 aaPredicted RBP1.75□□□□□ -2.13
SWI5YDR146C GEX1P25596 615 aa1.75□□□□□ -2.13
SWI5YDR146C AGA1P32323 725 aa1.75□□□□□ -2.13
SWI5YDR146C YNK1P36010 153 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C TIF5P38431 405 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C CCT2P39076 527 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C CCT4P39078 528 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C RRT5P43607 289 aa1.75□□□□□ -2.13
SWI5YDR146C IMP4P53941 290 aaKnown RBP1.75□□□□□ -2.13
SWI5YDR146C IRC15Q02733 499 aa1.75□□□□□ -2.13
SWI5YDR146C VPS74Q06385 345 aa1.75□□□□□ -2.13
SWI5YDR146C RIM20Q12033 661 aa1.75□□□□□ -2.13
SWI5YDR146C RPL20AP0CX23 172 aaKnown RBP1.74□□□□□ -2.13
SWI5YDR146C RPL20BP0CX24 172 aaPredicted RBP1.74□□□□□ -2.13
SWI5YDR146C RED1P14291 827 aa1.74□□□□□ -2.13
SWI5YDR146C SEC63P14906 663 aa1.74□□□□□ -2.13
SWI5YDR146C ATP10P18496 279 aa1.74□□□□□ -2.13
SWI5YDR146C MCK1P21965 375 aaKnown RBP1.74□□□□□ -2.13
SWI5YDR146C RGT1P32862 1170 aa1.74□□□□□ -2.13
SWI5YDR146C PMU1P36069 295 aa1.74□□□□□ -2.13
SWI5YDR146C YJL213WP40896 331 aa1.74□□□□□ -2.13
SWI5YDR146C VTC2P43585 828 aa1.74□□□□□ -2.13
SWI5YDR146C TRS85P46944 698 aa1.74□□□□□ -2.13
SWI5YDR146C OCA1P50946 238 aaPredicted RBP1.74□□□□□ -2.13
SWI5YDR146C CTF3Q12748 733 aa1.74□□□□□ -2.13
SWI5YDR146C CYB2P00175 591 aa1.73□□□□□ -2.13
SWI5YDR146C GDH1P07262 454 aaKnown RBP1.73□□□□□ -2.13
SWI5YDR146C EXO70P19658 623 aa1.73□□□□□ -2.13
SWI5YDR146C YIM1P28625 365 aa1.73□□□□□ -2.13
SWI5YDR146C THI2P38141 450 aa1.73□□□□□ -2.13
SWI5YDR146C YHR218WP38899 603 aa1.73□□□□□ -2.13
SWI5YDR146C SHO1P40073 367 aa1.73□□□□□ -2.13
SWI5YDR146C ALG8P40351 577 aa1.73□□□□□ -2.13
SWI5YDR146C TFG2P41896 400 aaPredicted RBP1.73□□□□□ -2.13
SWI5YDR146C IDP2P41939 412 aa1.73□□□□□ -2.13
SWI5YDR146C URB2P47108 1174 aa1.73□□□□□ -2.13
SWI5YDR146C ART5P53244 586 aaKnown RBP1.73□□□□□ -2.13
SWI5YDR146C BOR1P53838 576 aa1.73□□□□□ -2.13
SWI5YDR146C SOV1Q04748 898 aa1.73□□□□□ -2.13
SWI5YDR146C YLR287CQ05881 355 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms