RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C GCD1P09032 578 aaPredicted RBP4.48□□□□□ -1.69
CDC48YDL126C SNA3P14359 133 aa4.48□□□□□ -1.69
CDC48YDL126C PRP6P19735 899 aaPredicted RBP4.48□□□□□ -1.69
CDC48YDL126C PEX1P24004 1043 aa4.48□□□□□ -1.69
CDC48YDL126C HMX1P32339 317 aa4.48□□□□□ -1.69
CDC48YDL126C MRP20P32387 263 aa4.48□□□□□ -1.69
CDC48YDL126C UBC6P33296 250 aaPredicted RBP4.48□□□□□ -1.69
CDC48YDL126C SHP1P34223 423 aa4.48□□□□□ -1.69
CDC48YDL126C SER33P40510 469 aa4.48□□□□□ -1.69
CDC48YDL126C SHR5P41912 237 aa4.48□□□□□ -1.69
CDC48YDL126C BNA6P43619 295 aa4.48□□□□□ -1.69
CDC48YDL126C TRF5P48561 642 aaKnown RBP4.48□□□□□ -1.69
CDC48YDL126C KAP114P53067 1004 aa4.48□□□□□ -1.69
CDC48YDL126C NCS6P53088 359 aa4.48□□□□□ -1.69
CDC48YDL126C YGL039WP53183 348 aaKnown RBP4.48□□□□□ -1.69
CDC48YDL126C ARG5,6Q01217 863 aa4.48□□□□□ -1.69
CDC48YDL126C SEC10Q06245 871 aa4.48□□□□□ -1.69
CDC48YDL126C YPR078CQ06813 372 aa4.48□□□□□ -1.69
CDC48YDL126C CRD1Q07560 283 aa4.48□□□□□ -1.69
CDC48YDL126C TGS1Q12052 315 aa4.48□□□□□ -1.69
CDC48YDL126C SFG1Q12507 346 aa4.48□□□□□ -1.69
CDC48YDL126C ERG6P25087 383 aaKnown RBP4.48□□□□□ -1.69
CDC48YDL126C PET127P32606 800 aa4.48□□□□□ -1.69
CDC48YDL126C RMA1P36001 430 aaKnown RBP4.48□□□□□ -1.69
CDC48YDL126C RCN1P36054 211 aa4.48□□□□□ -1.69
CDC48YDL126C MSS4P38994 779 aa4.48□□□□□ -1.69
CDC48YDL126C SEN34P39707 275 aa4.48□□□□□ -1.69
CDC48YDL126C MET28P40573 187 aa4.48□□□□□ -1.69
CDC48YDL126C NET1P47035 1189 aa4.48□□□□□ -1.69
CDC48YDL126C EFM3P47163 339 aa4.48□□□□□ -1.69
CDC48YDL126C COS5P47187 383 aa4.48□□□□□ -1.69
CDC48YDL126C ASI2P53895 289 aa4.48□□□□□ -1.69
CDC48YDL126C YNL040WP53960 456 aaPredicted RBP4.48□□□□□ -1.69
CDC48YDL126C RSM24Q03976 319 aa4.48□□□□□ -1.69
CDC48YDL126C MCM21Q06675 368 aa4.48□□□□□ -1.69
CDC48YDL126C VAC14Q06708 880 aa4.48□□□□□ -1.69
CDC48YDL126C GPB1Q08886 897 aa4.48□□□□□ -1.69
CDC48YDL126C ISA2Q12425 185 aa4.48□□□□□ -1.69
CDC48YDL126C GCN4P03069 281 aa4.47□□□□□ -1.69
CDC48YDL126C HOM2P13663 365 aaKnown RBP4.47□□□□□ -1.69
CDC48YDL126C YCK1P23291 538 aa4.47□□□□□ -1.69
CDC48YDL126C RAD57P25301 460 aa4.47□□□□□ -1.69
CDC48YDL126C MEI4P29467 408 aa4.47□□□□□ -1.69
CDC48YDL126C YSC83P32792 385 aa4.47□□□□□ -1.69
CDC48YDL126C MSG5P38590 489 aa4.47□□□□□ -1.69
CDC48YDL126C PDS1P40316 373 aaPredicted RBP4.47□□□□□ -1.69
CDC48YDL126C YIL089WP40500 205 aa4.47□□□□□ -1.69
CDC48YDL126C SNZ3P43545 298 aa4.47□□□□□ -1.69
CDC48YDL126C CHA4P43634 648 aa4.47□□□□□ -1.69
CDC48YDL126C APS3P47064 194 aa4.47□□□□□ -1.69
CDC48YDL126C SNZ2P53824 298 aa4.47□□□□□ -1.69
CDC48YDL126C ARK1P53974 638 aa4.47□□□□□ -1.69
CDC48YDL126C ATG23Q06671 453 aa4.47□□□□□ -1.69
CDC48YDL126C VPS36Q06696 566 aa4.47□□□□□ -1.69
CDC48YDL126C YDL114WQ07530 308 aa4.47□□□□□ -1.69
CDC48YDL126C SMC5Q08204 1093 aa4.47□□□□□ -1.69
CDC48YDL126C SPE1P08432 466 aa4.47□□□□□ -1.69
CDC48YDL126C RPL1AP0CX43 217 aaKnown RBP4.47□□□□□ -1.69
CDC48YDL126C RPL1BP0CX44 217 aaKnown RBP4.47□□□□□ -1.69
CDC48YDL126C VPS3P23643 1011 aa4.47□□□□□ -1.69
CDC48YDL126C MGM101P32787 269 aaKnown RBP4.47□□□□□ -1.69
CDC48YDL126C CCT6P39079 546 aa4.47□□□□□ -1.69
CDC48YDL126C HMF1P40037 129 aaKnown RBP4.47□□□□□ -1.69
CDC48YDL126C SCC4P40090 624 aa4.47□□□□□ -1.69
CDC48YDL126C LRO1P40345 661 aa4.47□□□□□ -1.69
CDC48YDL126C CTR1P49573 406 aa4.47□□□□□ -1.69
CDC48YDL126C MRPL50P53724 139 aa4.47□□□□□ -1.69
CDC48YDL126C TDA6Q06466 467 aa4.47□□□□□ -1.69
CDC48YDL126C ENT4Q07872 247 aa4.47□□□□□ -1.69
CDC48YDL126C ERP3Q12403 225 aa4.47□□□□□ -1.69
CDC48YDL126C RAP1P11938 827 aa4.46□□□□□ -1.69
CDC48YDL126C CKI1P20485 582 aa4.46□□□□□ -1.69
CDC48YDL126C ARG1P22768 420 aa4.46□□□□□ -1.69
CDC48YDL126C ZIP1P31111 875 aa4.46□□□□□ -1.69
CDC48YDL126C SIN4P32259 974 aa4.46□□□□□ -1.69
CDC48YDL126C MSN4P33749 630 aa4.46□□□□□ -1.69
CDC48YDL126C LRG1P35688 1017 aa4.46□□□□□ -1.69
CDC48YDL126C POA1P38218 177 aa4.46□□□□□ -1.69
CDC48YDL126C YHR112CP38716 378 aa4.46□□□□□ -1.69
CDC48YDL126C YHR078WP38799 552 aa4.46□□□□□ -1.69
CDC48YDL126C MIG2P53035 382 aa4.46□□□□□ -1.69
CDC48YDL126C TIM21P53220 239 aa4.46□□□□□ -1.69
CDC48YDL126C BOP3P53958 396 aa4.46□□□□□ -1.69
CDC48YDL126C TIM8P57744 87 aa4.46□□□□□ -1.69
CDC48YDL126C FMP42Q04991 504 aa4.46□□□□□ -1.69
CDC48YDL126C YLR297WQ05899 129 aa4.46□□□□□ -1.69
CDC48YDL126C IWR1Q07532 353 aaPredicted RBP4.46□□□□□ -1.69
CDC48YDL126C UAF30Q08747 228 aa4.46□□□□□ -1.69
CDC48YDL126C MRPL8P22353 238 aa4.46□□□□□ -1.7
CDC48YDL126C TKL1P23254 680 aaKnown RBP4.46□□□□□ -1.7
CDC48YDL126C CLB2P24869 491 aa4.46□□□□□ -1.7
CDC48YDL126C PHO91P27514 894 aa4.46□□□□□ -1.7
CDC48YDL126C NTG1P31378 399 aa4.46□□□□□ -1.7
CDC48YDL126C YUH1P35127 236 aa4.46□□□□□ -1.7
CDC48YDL126C VPS51P36116 164 aa4.46□□□□□ -1.7
CDC48YDL126C REG2P38232 338 aa4.46□□□□□ -1.7
CDC48YDL126C SAF1P38352 637 aa4.46□□□□□ -1.7
CDC48YDL126C MNL1P38888 796 aa4.46□□□□□ -1.7
CDC48YDL126C REV7P38927 245 aa4.46□□□□□ -1.7
CDC48YDL126C EDC3P39998 551 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms