RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W PMA2P19657 947 aa1.68□□□□□ -2.14
TRM3YDL112W PPH21P23594 369 aa1.68□□□□□ -2.14
TRM3YDL112W GDA1P32621 518 aa1.68□□□□□ -2.14
TRM3YDL112W CDC13P32797 924 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W RMA1P36001 430 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W VPS24P36095 224 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W APL3P38065 1025 aa1.68□□□□□ -2.14
TRM3YDL112W MMS21P38632 267 aa1.68□□□□□ -2.14
TRM3YDL112W SIC1P38634 284 aa1.68□□□□□ -2.14
TRM3YDL112W RRP3P38712 501 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W CHS7P38843 316 aa1.68□□□□□ -2.14
TRM3YDL112W DHH1P39517 506 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W URM1P40554 99 aaPredicted RBP1.68□□□□□ -2.14
TRM3YDL112W YPS6P40583 537 aa1.68□□□□□ -2.14
TRM3YDL112W ERR3P42222 437 aa1.68□□□□□ -2.14
TRM3YDL112W IVY1Q04934 453 aa1.68□□□□□ -2.14
TRM3YDL112W MCM21Q06675 368 aa1.68□□□□□ -2.14
TRM3YDL112W GRS2Q06817 618 aa1.68□□□□□ -2.14
TRM3YDL112W BSC6Q08280 497 aa1.68□□□□□ -2.14
TRM3YDL112W AAD15Q08361 143 aa1.68□□□□□ -2.14
TRM3YDL112W PGC1Q08959 321 aa1.68□□□□□ -2.14
TRM3YDL112W LEU9Q12166 604 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W FRE7Q12333 620 aa1.68□□□□□ -2.14
TRM3YDL112W FUR1P18562 216 aaKnown RBP1.67□□□□□ -2.14
TRM3YDL112W TRX1P22217 103 aaKnown RBP1.67□□□□□ -2.14
TRM3YDL112W AEP1P32493 518 aa1.67□□□□□ -2.14
TRM3YDL112W BLI1P35727 113 aa1.67□□□□□ -2.14
TRM3YDL112W MPE1P35728 441 aaKnown RBP1.67□□□□□ -2.14
TRM3YDL112W YPT52P36018 234 aaKnown RBP1.67□□□□□ -2.14
TRM3YDL112W PSY4P38193 441 aa1.67□□□□□ -2.14
TRM3YDL112W RRT5P43607 289 aa1.67□□□□□ -2.14
TRM3YDL112W DOS2P54858 310 aa1.67□□□□□ -2.14
TRM3YDL112W INA17Q02888 182 aa1.67□□□□□ -2.14
TRM3YDL112W SWC7Q06707 132 aa1.67□□□□□ -2.14
TRM3YDL112W OPY2Q06810 360 aa1.67□□□□□ -2.14
TRM3YDL112W BUD7Q08754 746 aa1.67□□□□□ -2.14
TRM3YDL112W OCA6Q12454 224 aa1.67□□□□□ -2.14
TRM3YDL112W AVL9Q12500 764 aa1.67□□□□□ -2.14
TRM3YDL112W PAB1P04147 577 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
TRM3YDL112W ACO1P19414 778 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
TRM3YDL112W SPR1P32603 445 aa1.67□□□□□ -2.14
TRM3YDL112W PET127P32606 800 aa1.67□□□□□ -2.14
TRM3YDL112W STB6P36085 766 aa1.67□□□□□ -2.14
TRM3YDL112W RCK2P38623 610 aa1.67□□□□□ -2.14
TRM3YDL112W LTP1P40347 161 aa1.67□□□□□ -2.14
TRM3YDL112W PRM2P40534 656 aa1.67□□□□□ -2.14
TRM3YDL112W YNL058CP53947 316 aa1.67□□□□□ -2.14
TRM3YDL112W RPC11Q04307 110 aaPredicted RBP1.67□□□□□ -2.14
TRM3YDL112W NRT1Q08485 598 aa1.67□□□□□ -2.14
TRM3YDL112W EMP46Q12396 444 aa1.67□□□□□ -2.14
TRM3YDL112W PNS1Q12412 539 aa1.67□□□□□ -2.14
TRM3YDL112W AFI1Q99222 893 aa1.67□□□□□ -2.14
TRM3YDL112W YPR089WO13585 888 aa1.67□□□□□ -2.14
TRM3YDL112W ADH4P10127 382 aa1.67□□□□□ -2.14
TRM3YDL112W TRX2P22803 104 aaKnown RBP1.67□□□□□ -2.14
TRM3YDL112W SMI1P32566 505 aa1.67□□□□□ -2.14
TRM3YDL112W CYM1P32898 989 aa1.67□□□□□ -2.14
TRM3YDL112W NIP100P33420 868 aa1.67□□□□□ -2.14
TRM3YDL112W SDS22P36047 338 aa1.67□□□□□ -2.14
TRM3YDL112W GLG1P36143 616 aa1.67□□□□□ -2.14
TRM3YDL112W MRPL15P36523 253 aa1.67□□□□□ -2.14
TRM3YDL112W ARA1P38115 344 aa1.67□□□□□ -2.14
TRM3YDL112W YBR062CP38239 180 aa1.67□□□□□ -2.14
TRM3YDL112W IME4P41833 600 aa1.67□□□□□ -2.14
TRM3YDL112W YJR039WP47107 1121 aa1.67□□□□□ -2.14
TRM3YDL112W PEX15Q08215 383 aa1.67□□□□□ -2.14
TRM3YDL112W COX17Q12287 69 aa1.67□□□□□ -2.14
TRM3YDL112W SEM1O94742 89 aa1.67□□□□□ -2.14
TRM3YDL112W CWP1P28319 239 aa1.67□□□□□ -2.14
TRM3YDL112W SSH4P32343 579 aa1.67□□□□□ -2.14
TRM3YDL112W MIC60P36112 540 aa1.67□□□□□ -2.14
TRM3YDL112W LRP1P38801 184 aaKnown RBP1.67□□□□□ -2.14
TRM3YDL112W CIS3P47001 227 aa1.67□□□□□ -2.14
TRM3YDL112W YIP4P53093 235 aa1.67□□□□□ -2.14
TRM3YDL112W YNL040WP53960 456 aaPredicted RBP1.67□□□□□ -2.14
TRM3YDL112W EFM6P53970 246 aa1.67□□□□□ -2.14
TRM3YDL112W CDC14Q00684 551 aa1.67□□□□□ -2.14
TRM3YDL112W SPP2Q02521 185 aa1.67□□□□□ -2.14
TRM3YDL112W CEF1Q03654 590 aaPredicted RBP1.67□□□□□ -2.14
TRM3YDL112W ATG10Q07879 167 aa1.67□□□□□ -2.14
TRM3YDL112W YLL056CQ12177 298 aa1.67□□□□□ -2.14
TRM3YDL112W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
TRM3YDL112W GAL1P04385 528 aa1.66□□□□□ -2.14
TRM3YDL112W TUB1P09733 447 aaKnown RBP1.66□□□□□ -2.14
TRM3YDL112W PEP5P12868 1029 aa1.66□□□□□ -2.14
TRM3YDL112W SPT15P13393 240 aaKnown RBP1.66□□□□□ -2.14
TRM3YDL112W CLN1P20437 546 aa1.66□□□□□ -2.14
TRM3YDL112W EPT1P22140 391 aa1.66□□□□□ -2.14
TRM3YDL112W ARG1P22768 420 aa1.66□□□□□ -2.14
TRM3YDL112W CLB4P24871 460 aa1.66□□□□□ -2.14
TRM3YDL112W RPN12P32496 274 aa1.66□□□□□ -2.14
TRM3YDL112W TAE1P38340 232 aa1.66□□□□□ -2.14
TRM3YDL112W CYC2P38909 366 aa1.66□□□□□ -2.14
TRM3YDL112W DPH1P40487 425 aaKnown RBP1.66□□□□□ -2.14
TRM3YDL112W NIT2P47016 307 aa1.66□□□□□ -2.14
TRM3YDL112W NNF2P53253 936 aa1.66□□□□□ -2.14
TRM3YDL112W RLI1Q03195 608 aaKnown RBP1.66□□□□□ -2.14
TRM3YDL112W SMF3Q12078 473 aaPredicted RBP1.66□□□□□ -2.14
TRM3YDL112W DIN7Q12086 430 aa1.66□□□□□ -2.14
TRM3YDL112W RRP12Q12754 1228 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms