RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	NDE1	P40215	560 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	PRK1	P40494	810 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	YFL040W	P43562	540 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	CIT3	P43635	486 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	MNN5	P46982	586 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	MNN10	P50108	393 aa	Known RBP	4.54	□□□□□ -1.68
VHC1	YBR235W	RTA1	P53047	317 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	NHX1	Q04121	633 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	MUS81	Q04149	632 aa	Predicted RBP	4.54	□□□□□ -1.68
VHC1	YBR235W	RCL1	Q08096	367 aa	Predicted RBP	4.54	□□□□□ -1.68
VHC1	YBR235W	PEX27	Q08580	376 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	AGC1	Q12482	902 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	MDM12	Q92328	271 aa		4.54	□□□□□ -1.68
VHC1	YBR235W	YLR462W	O13556	202 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	COB	P00163	385 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	UBC8	P28263	218 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	PAH1	P32567	862 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	GDH2	P33327	1092 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	SNU114	P36048	1008 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	NOP4	P37838	685 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	ECM13	P38195	257 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	GUA1	P38625	525 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	YHL049C	P38722	271 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	RRP4	P38792	359 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	YEL075C	P39972	122 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YER189W	P40104	122 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YMR147W	P40218	223 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	ICE2	P40499	491 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YFL064C	P43540	174 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	RPE1	P46969	238 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	AAD10	P47182	288 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	DAK1	P54838	584 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	EAR1	Q03212	550 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	TRS130	Q03660	1102 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YOR238W	Q08634	303 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	SSP2	Q08646	371 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	ENV7	Q12003	364 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	AHC1	Q12433	566 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	RPP2B	P02400	110 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	TPK2	P06245	380 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	MIR1	P23641	311 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	RNA14	P25298	677 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	DHR2	P36009	735 aa	Predicted RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	MAL32	P38158	584 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	MMS4	P38257	691 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	EGD2	P38879	174 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	PAC1	P39946	494 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	FMP52	P40008	231 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YIL166C	P40445	542 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	QDR1	P40475	563 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YJR030C	P47101	745 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YPT32	P51996	222 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	MAL12	P53341	584 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	JIP4	Q03361	876 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	TPP1	Q03796	238 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	TDA5	Q06417	326 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	GUP2	Q08929	609 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	HOM2	P13663	365 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	MIP1	P15801	1254 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	HEM15	P16622	393 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	RRP7	P25368	297 aa	Predicted RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	CPR3	P25719	182 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	HMT1	P38074	348 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	SLI15	P38283	698 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	TIF11	P38912	153 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	MLH1	P38920	769 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	PLB1	P39105	664 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	ECM10	P39987	644 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	REF2	P42073	533 aa	Predicted RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	INN1	P53901	409 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	ENT5	Q03769	411 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	YDR131C	Q03899	556 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YLR345W	Q06137	509 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YDL129W	Q07555	291 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	AAD15	Q08361	143 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	YOR283W	Q12040	230 aa	Known RBP	4.53	□□□□□ -1.68
VHC1	YBR235W	YPR1	Q12458	312 aa		4.53	□□□□□ -1.68
VHC1	YBR235W	RPL22A	P05749	121 aa	Known RBP	4.52	□□□□□ -1.69
VHC1	YBR235W	SIR1	P21691	654 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	SED4	P25365	1065 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	MGR1	P25573	417 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	CDC20	P26309	610 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	RPD3	P32561	433 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	SOF1	P33750	489 aa	Known RBP	4.52	□□□□□ -1.69
VHC1	YBR235W	CBT1	P36038	271 aa	Predicted RBP	4.52	□□□□□ -1.69
VHC1	YBR235W	MAP2	P38174	421 aa	Known RBP	4.52	□□□□□ -1.69
VHC1	YBR235W	UBA4	P38820	440 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	PEX28	P38848	579 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	RAD55	P38953	406 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	IDP2	P41939	412 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	AIM23	P47015	356 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	HOC1	P47124	396 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	DOC1	P53068	250 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	NMA2	P53204	395 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	GRX5	Q02784	150 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	CIA1	Q05583	330 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	ESC8	Q08119	714 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	DSE3	Q08729	430 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	VAM3	Q12241	283 aa		4.52	□□□□□ -1.69
VHC1	YBR235W	RPN6	Q12377	434 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms