RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 PIGSQ96S52 555 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 LY9Q9HBG7 655 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 KPNA6O60684 536 aa16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 POLR2MP0CAP2 368 aa16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 FGD1P98174 961 aa16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 SKAP1Q86WV1 359 aa16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 NEK1Q96PY6 1258 aa16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 DDX49Q9Y6V7 483 aaKnown RBP16.68■□□□□ 0.26
PKNOX1-210ENST00000607049 KIAA0355O15063 1070 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 REC8O95072 547 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 HSD17B4P51659 736 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 LRIT3Q3SXY7 679 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 BADQ92934 168 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 CUL5Q93034 780 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 SENP2Q9HC62 589 aa16.67■□□□□ 0.26
PKNOX1-210ENST00000607049 TRIM43BA6NCK2 446 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 EIF2AK2P19525 551 aaKnown RBP16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 ITGA7Q13683 1181 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 SEPT14Q6ZU15 432 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 PIBF1Q8WXW3 757 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 TBC1D5Q92609 795 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 TRIM43Q96BQ3 446 aaPredicted RBP16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 PXMP2Q9NR77 195 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 MCM3APO60318 1980 aa16.66■□□□□ 0.26
PKNOX1-210ENST00000607049 CTAGE5O15320 804 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 NR3C2P08235 984 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 MYL3P08590 195 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 CDK7P50613 346 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 GHRHRQ02643 423 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 FAAP100Q0VG06 881 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 KCNV1Q6PIU1 500 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 SH3RF1Q7Z6J0 888 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 MTG1Q9BT17 334 aaPredicted RBP16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 MYL10Q9BUA6 226 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
PKNOX1-210ENST00000607049 CYTH3O43739 400 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 TIMP1P01033 207 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 GH1P01241 217 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 CCND2P30279 289 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 FPGSQ05932 587 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 FCHSD1Q86WN1 690 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 TMEM199Q8N511 208 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 FANCBQ8NB91 859 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 RBM28Q9NW13 759 aaKnown RBP16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 COL20A1Q9P218 1284 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.25
PKNOX1-210ENST00000607049 A6NJR5 290 aa16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 HOXA13P31271 388 aaPredicted RBP16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 MICU3Q86XE3 530 aa16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 FAM126BQ8IXS8 530 aa16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 SMARCC2Q8TAQ2 1214 aa16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 PDCD2LQ9BRP1 358 aa16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 LRRC2Q9BYS8 371 aa16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
PKNOX1-210ENST00000607049 RANBP2P49792 3224 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 ZBTB43O43298 467 aa16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 CASTP20810 708 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 PURAQ00577 322 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 PPIGQ13427 754 aaKnown RBP eCLIP16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 LAMC2Q13753 1193 aa16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 TBX21Q9UL17 535 aa16.62■□□□□ 0.25
PKNOX1-210ENST00000607049 OPLAHO14841 1288 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 STAM2O75886 525 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 TGFB3P10600 412 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 RXRAP19793 462 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 PSMA5P28066 241 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 PGM5Q15124 567 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 LY6KQ17RY6 165 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 FAM47CQ5HY64 1035 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 MFSD5Q6N075 450 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 CCDC62Q6P9F0 684 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 VSIG10LQ86VR7 867 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 SLC43A3Q8NBI5 491 aa16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
PKNOX1-210ENST00000607049 CCDC196A0A1B0GTZ2 297 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 PLEKHA8P1O95397 391 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 PTGS1P23219 599 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 PSMC6P62333 389 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 DGKDQ16760 1214 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms