RNA–Protein interactions for RNA: ENST00000604589.1

RPS28P1-201, Transcript of ribosomal protein S28 pseudogene 1, humanhuman

BASIC

Gene RPS28P1, Length 187 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P1-201ENST00000604589 FAAP100Q0VG06 881 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 KRT32Q14532 448 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 STXBP2Q15833 593 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 FAM109BQ6ICB4 259 aaPredicted RBP8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 KCNV1Q6PIU1 500 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 EEPD1Q7L9B9 569 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 FAM126BQ8IXS8 530 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 ZNF654Q8IZM8 581 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 TRIM43Q96BQ3 446 aaPredicted RBP8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 CCDC136Q96JN2 1154 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 PURBQ96QR8 312 aaKnown RBP8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 RMDN3Q96TC7 470 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 TMEM39AQ9NV64 488 aa8.74□□□□□ -1.01
RPS28P1-201ENST00000604589 SMCHD1A6NHR9 2005 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 CCDC69A6NI79 296 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 GCOM1H8Y6P7 765 aaPredicted RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 SOX1O00570 391 aaPredicted RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 OPLAHO14841 1288 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 CYTH3O43739 400 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 PPP1R11O60927 126 aaPredicted RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 STAM2O75886 525 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 TIMP1P01033 207 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 CD4P01730 458 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 HMGB1P09429 215 aaKnown RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 SUPT20HL2P0C7V6 817 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 POLR2MP0CAP2 368 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 PURAQ00577 322 aaKnown RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 BEX3Q00994 111 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 FPGSQ05932 587 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 ITGA7Q13683 1181 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 SLC35G1Q2M3R5 365 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 ARHGEF16Q5VV41 709 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 MFSD5Q6N075 450 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 XRRA1Q6P2D8 792 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 CCDC62Q6P9F0 684 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 CXCL17Q6UXB2 119 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 SH3RF1Q7Z6J0 888 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 OR6J1Q8NGC5 347 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 BADQ92934 168 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 EMID1Q96A84 441 aaPredicted RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 PIGSQ96S52 555 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 PDCD2LQ9BRP1 358 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 MTG1Q9BT17 334 aaPredicted RBP8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 VAT1LQ9HCJ6 419 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 PXMP2Q9NR77 195 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 COL20A1Q9P218 1284 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 FRMPD4Q14CM0 1322 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 LTBP2Q14767 1821 aa8.73□□□□□ -1.01
RPS28P1-201ENST00000604589 LCTP09848 1927 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 TMEM265A0A087WTH1 108 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 CFBP00751 764 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 GH1P01241 217 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 NR3C2P08235 984 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 TXNP10599 105 aaKnown RBP8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 TGFB3P10600 412 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 SMAD3P84022 425 aaKnown RBP8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 NFRKBQ6P4R8 1299 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 CHST3Q7LGC8 479 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 VSIG10LQ86VR7 867 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 HOMER1Q86YM7 354 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 TMEM199Q8N511 208 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 KCNB2Q92953 911 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 RRP36Q96EU6 259 aaKnown RBP8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 TAAR1Q96RJ0 339 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 SENP2Q9HC62 589 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 GPHNQ9NQX3 736 aaPredicted RBP8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 SEC63Q9UGP8 760 aaKnown RBP8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 SLC12A7Q9Y666 1083 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 MCM3APO60318 1980 aa8.72□□□□□ -1.01
RPS28P1-201ENST00000604589 hCG_1984214I3L0E3 225 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 REC8O95072 547 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 HOXD8P13378 290 aaPredicted RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 EIF2AK2P19525 551 aaKnown RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 CCND2P30279 289 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 ARHGAP1Q07960 439 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 LAMC2Q13753 1193 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 GNPTABQ3T906 1256 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 PSRC1Q6PGN9 363 aaPredicted RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 SYNE3Q6ZMZ3 975 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 DHX32Q7L7V1 743 aaKnown RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 SESTD1Q86VW0 696 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 ZNF713Q8N859 430 aaPredicted RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 PPTC7Q8NI37 304 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 TBC1D5Q92609 795 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 LRCH3Q96II8 777 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 NEK1Q96PY6 1258 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 ALDH8A1Q9H2A2 487 aaPredicted RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 RBM28Q9NW13 759 aaKnown RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 DDX41Q9UJV9 622 aaKnown RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 DDX49Q9Y6V7 483 aaKnown RBP8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 GRIN2DO15399 1336 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 LAMA3Q16787 3333 aa8.71□□□□□ -1.02
RPS28P1-201ENST00000604589 ARIH2O95376 493 aa8.7□□□□□ -1.02
RPS28P1-201ENST00000604589 PFKMP08237 780 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms