RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 PFKMP08237 780 aa16.35■□□□□ 0.21
SF3A2-205ENST00000590034 GOLGA8HP0CJ92 632 aa16.35■□□□□ 0.21
SF3A2-205ENST00000590034 PDE4DQ08499 809 aa16.35■□□□□ 0.21
SF3A2-205ENST00000590034 FAM47CQ5HY64 1035 aa16.35■□□□□ 0.21
SF3A2-205ENST00000590034 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
SF3A2-205ENST00000590034 EPOPA6NHQ4 379 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 RBAK-RBAKDNI3L0D1 243 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 RFXAPO00287 272 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 NKRFO15226 690 aaKnown RBP eCLIP16.34■□□□□ 0.21
SF3A2-205ENST00000590034 MRPS5P82675 430 aaKnown RBP16.34■□□□□ 0.21
SF3A2-205ENST00000590034 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
SF3A2-205ENST00000590034 USH1GQ495M9 461 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 MFSD6Q6ZSS7 791 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 DNERQ8NFT8 737 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 TTC14Q96N46 770 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
SF3A2-205ENST00000590034 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
SF3A2-205ENST00000590034 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 IQCF3P0C7M6 154 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 TXNP10599 105 aaKnown RBP16.33■□□□□ 0.2
SF3A2-205ENST00000590034 MICALL1Q8N3F8 863 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 TBC1D5Q92609 795 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 CTAGE1Q96RT6 745 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 UBA5Q9GZZ9 404 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 CERS4Q9HA82 394 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 COL20A1Q9P218 1284 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
SF3A2-205ENST00000590034 RAD50Q92878 1312 aa16.33■□□□□ 0.2
SF3A2-205ENST00000590034 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.2
SF3A2-205ENST00000590034 PCP11498 1178 aaKnown RBP16.32■□□□□ 0.2
SF3A2-205ENST00000590034 TFF2Q03403 129 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 TMEM67Q5HYA8 995 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 CCDC62Q6P9F0 684 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 SPRED2Q7Z698 418 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 TICAM2Q86XR7 235 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 NECAB3Q96P71 396 aaPredicted RBP16.32■□□□□ 0.2
SF3A2-205ENST00000590034 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
SF3A2-205ENST00000590034 LNPKQ9C0E8 428 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 BRWD1Q9NSI6 2320 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 RAPGEFL1Q9UHV5 662 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 PNMA2Q9UL42 364 aa16.32■□□□□ 0.2
SF3A2-205ENST00000590034 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 KPNA6O60684 536 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 RFC2P35250 354 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 PTPN11Q06124 597 aaPredicted RBP16.31■□□□□ 0.2
SF3A2-205ENST00000590034 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
SF3A2-205ENST00000590034 BRDTQ58F21 947 aaPredicted RBP16.31■□□□□ 0.2
SF3A2-205ENST00000590034 GPATCH4Q5T3I0 446 aaKnown RBP16.31■□□□□ 0.2
SF3A2-205ENST00000590034 KRT40Q6A162 431 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 TAAR1Q96RJ0 339 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 SLC9A7Q96T83 725 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
SF3A2-205ENST00000590034 MTCH2Q9Y6C9 303 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
SF3A2-205ENST00000590034 MMP3P08254 477 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 ACTN1P12814 892 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 COL9A1P20849 921 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 ARHGAP1Q07960 439 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 GPNMBQ14956 572 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 LY6KQ17RY6 165 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 HERC6Q8IVU3 1022 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 PNMA1Q8ND90 353 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 SYTL5Q8TDW5 730 aaPredicted RBP16.3■□□□□ 0.2
SF3A2-205ENST00000590034 ESR2Q92731 530 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 KAT2BQ92831 832 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 RILPL2Q969X0 211 aa16.3■□□□□ 0.2
SF3A2-205ENST00000590034 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
SF3A2-205ENST00000590034 KDM4AO75164 1064 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 BMP1P13497 986 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 SDSP20132 328 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 POU3F3P20264 500 aaPredicted RBP16.29■□□□□ 0.2
SF3A2-205ENST00000590034 KCNQ1P51787 676 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 TAP1Q03518 808 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 GDF6Q6KF10 455 aaPredicted RBP16.29■□□□□ 0.2
SF3A2-205ENST00000590034 SEPT14Q6ZU15 432 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 ADGRF4Q8IZF3 695 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
SF3A2-205ENST00000590034 DHX38Q92620 1227 aaKnown RBP16.29■□□□□ 0.2
SF3A2-205ENST00000590034 ABCB11O95342 1321 aa16.28■□□□□ 0.2
SF3A2-205ENST00000590034 BFSP2Q13515 415 aa16.28■□□□□ 0.2
SF3A2-205ENST00000590034 PTGISQ16647 500 aa16.28■□□□□ 0.2
SF3A2-205ENST00000590034 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
SF3A2-205ENST00000590034 TMCO2Q7Z6W1 182 aaPredicted RBP16.28■□□□□ 0.2
SF3A2-205ENST00000590034 SESTD1Q86VW0 696 aa16.28■□□□□ 0.2
SF3A2-205ENST00000590034 ENAHQ8N8S7 591 aaPredicted RBP16.28■□□□□ 0.2
SF3A2-205ENST00000590034 ANKS1AQ92625 1134 aa16.28■□□□□ 0.2
SF3A2-205ENST00000590034 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.2
SF3A2-205ENST00000590034 NOD1Q9Y239 953 aa16.28■□□□□ 0.2
SF3A2-205ENST00000590034 LCHNA4D1U4 455 aa16.27■□□□□ 0.2
SF3A2-205ENST00000590034 B4DLN1 442 aa16.27■□□□□ 0.2
SF3A2-205ENST00000590034 B4E1Z4 1266 aa16.27■□□□□ 0.2
SF3A2-205ENST00000590034 ZNF213O14771 459 aa16.27■□□□□ 0.2
SF3A2-205ENST00000590034 OPLAHO14841 1288 aa16.27■□□□□ 0.2
SF3A2-205ENST00000590034 GH1P01241 217 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms