RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 SMARCA1P28370 1054 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 LIFRP42702 1097 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 IRX5P78411 483 aaPredicted RBP19.27■□□□□ 0.68
NFIC-208ENST00000589537 FAAP100Q0VG06 881 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 TTLL4Q14679 1199 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 ARHGEF16Q5VV41 709 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 CXCL17Q6UXB2 119 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 BADQ92934 168 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 TRIM43Q96BQ3 446 aaPredicted RBP19.27■□□□□ 0.68
NFIC-208ENST00000589537 SENP2Q9HC62 589 aa19.27■□□□□ 0.68
NFIC-208ENST00000589537 MYH6P13533 1939 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 CCDC69A6NI79 296 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 SH2B2O14492 632 aaPredicted RBP19.26■□□□□ 0.67
NFIC-208ENST00000589537 KPNA6O60684 536 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 STXBP2Q15833 593 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 NFXL1Q6ZNB6 911 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 SH3RF1Q7Z6J0 888 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 HOMER1Q86YM7 354 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 SLC43A3Q8NBI5 491 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 TAAR1Q96RJ0 339 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 SPZ1Q9BXG8 430 aa19.26■□□□□ 0.67
NFIC-208ENST00000589537 PPP1R11O60927 126 aaPredicted RBP19.25■□□□□ 0.67
NFIC-208ENST00000589537 KRT32Q14532 448 aa19.25■□□□□ 0.67
NFIC-208ENST00000589537 FAM126BQ8IXS8 530 aa19.25■□□□□ 0.67
NFIC-208ENST00000589537 OR6J1Q8NGC5 347 aa19.25■□□□□ 0.67
NFIC-208ENST00000589537 TBC1D5Q92609 795 aa19.25■□□□□ 0.67
NFIC-208ENST00000589537 PIGSQ96S52 555 aa19.25■□□□□ 0.67
NFIC-208ENST00000589537 GPHNQ9NQX3 736 aaPredicted RBP19.25■□□□□ 0.67
NFIC-208ENST00000589537 COL20A1Q9P218 1284 aa19.25■□□□□ 0.67
NFIC-208ENST00000589537 TBX21Q9UL17 535 aa19.25■□□□□ 0.67
NFIC-208ENST00000589537 GCOM1H8Y6P7 765 aaPredicted RBP19.24■□□□□ 0.67
NFIC-208ENST00000589537 SOX1O00570 391 aaPredicted RBP19.24■□□□□ 0.67
NFIC-208ENST00000589537 OPLAHO14841 1288 aa19.24■□□□□ 0.67
NFIC-208ENST00000589537 CYTH3O43739 400 aa19.24■□□□□ 0.67
NFIC-208ENST00000589537 EIF3JO75822 258 aaKnown RBP19.24■□□□□ 0.67
NFIC-208ENST00000589537 POLR2MP0CAP2 368 aa19.24■□□□□ 0.67
NFIC-208ENST00000589537 TXNP10599 105 aaKnown RBP19.24■□□□□ 0.67
NFIC-208ENST00000589537 ITGA7Q13683 1181 aa19.24■□□□□ 0.67
NFIC-208ENST00000589537 SKAP1Q86WV1 359 aa19.24■□□□□ 0.67
NFIC-208ENST00000589537 PXMP2Q9NR77 195 aa19.24■□□□□ 0.67
NFIC-208ENST00000589537 A6NJR5 290 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 TIMP1P01033 207 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 NR3C2P08235 984 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 FPGSQ05932 587 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 SLC35G1Q2M3R5 365 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 TSGA10IPQ3SY00 556 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 SGMS1Q86VZ5 419 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 RRP36Q96EU6 259 aaKnown RBP19.23■□□□□ 0.67
NFIC-208ENST00000589537 LRCH3Q96II8 777 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 NEK1Q96PY6 1258 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 SEC63Q9UGP8 760 aaKnown RBP19.23■□□□□ 0.67
NFIC-208ENST00000589537 SLC12A7Q9Y666 1083 aa19.23■□□□□ 0.67
NFIC-208ENST00000589537 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
NFIC-208ENST00000589537 PURAQ00577 322 aaKnown RBP19.22■□□□□ 0.67
NFIC-208ENST00000589537 TMEM63BQ5T3F8 832 aa19.22■□□□□ 0.67
NFIC-208ENST00000589537 CCDC62Q6P9F0 684 aa19.22■□□□□ 0.67
NFIC-208ENST00000589537 KCNV1Q6PIU1 500 aa19.22■□□□□ 0.67
NFIC-208ENST00000589537 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
NFIC-208ENST00000589537 MTG1Q9BT17 334 aaPredicted RBP19.22■□□□□ 0.67
NFIC-208ENST00000589537 GH1P01241 217 aa19.21■□□□□ 0.67
NFIC-208ENST00000589537 CD4P01730 458 aa19.21■□□□□ 0.67
NFIC-208ENST00000589537 HMGB1P09429 215 aaKnown RBP19.21■□□□□ 0.67
NFIC-208ENST00000589537 PPIGQ13427 754 aaKnown RBP eCLIP19.21■□□□□ 0.67
NFIC-208ENST00000589537 MFSD5Q6N075 450 aa19.21■□□□□ 0.67
NFIC-208ENST00000589537 PDCD2LQ9BRP1 358 aa19.21■□□□□ 0.67
NFIC-208ENST00000589537 MYL10Q9BUA6 226 aa19.21■□□□□ 0.67
NFIC-208ENST00000589537 MYL3P08590 195 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 SUPT20HL2P0C7V6 817 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 PTGS1P23219 599 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 ITGB8P26012 769 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 SEPT14Q6ZU15 432 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 DHX32Q7L7V1 743 aaKnown RBP19.2■□□□□ 0.66
NFIC-208ENST00000589537 TMEM199Q8N511 208 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 LAMA3Q16787 3333 aa19.2■□□□□ 0.66
NFIC-208ENST00000589537 STAM2O75886 525 aa19.19■□□□□ 0.66
NFIC-208ENST00000589537 ARIH2O95376 493 aa19.19■□□□□ 0.66
NFIC-208ENST00000589537 CCND2P30279 289 aa19.19■□□□□ 0.66
NFIC-208ENST00000589537 SHHQ15465 462 aa19.19■□□□□ 0.66
NFIC-208ENST00000589537 VSIG10LQ86VR7 867 aa19.19■□□□□ 0.66
NFIC-208ENST00000589537 CUL5Q93034 780 aa19.19■□□□□ 0.66
NFIC-208ENST00000589537 EMID1Q96A84 441 aaPredicted RBP19.19■□□□□ 0.66
NFIC-208ENST00000589537 RBM28Q9NW13 759 aaKnown RBP19.19■□□□□ 0.66
NFIC-208ENST00000589537 GRIN2DO15399 1336 aa19.19■□□□□ 0.66
NFIC-208ENST00000589537 REC8O95072 547 aa19.18■□□□□ 0.66
NFIC-208ENST00000589537 TGFB3P10600 412 aa19.18■□□□□ 0.66
NFIC-208ENST00000589537 HOXA13P31271 388 aaPredicted RBP19.18■□□□□ 0.66
NFIC-208ENST00000589537 PTPN11Q06124 597 aaPredicted RBP19.18■□□□□ 0.66
NFIC-208ENST00000589537 PGM5Q15124 567 aa19.18■□□□□ 0.66
NFIC-208ENST00000589537 C9orf50Q5SZB4 431 aa19.18■□□□□ 0.66
NFIC-208ENST00000589537 ERICH6BQ5W0A0 696 aa19.18■□□□□ 0.66
NFIC-208ENST00000589537 FAM109BQ6ICB4 259 aaPredicted RBP19.18■□□□□ 0.66
NFIC-208ENST00000589537 FANCBQ8NB91 859 aa19.18■□□□□ 0.66
NFIC-208ENST00000589537 ALDH8A1Q9H2A2 487 aaPredicted RBP19.18■□□□□ 0.66
NFIC-208ENST00000589537 DDX41Q9UJV9 622 aaKnown RBP19.18■□□□□ 0.66
NFIC-208ENST00000589537 FRMPD4Q14CM0 1322 aa19.18■□□□□ 0.66
NFIC-208ENST00000589537 PIK3CDO00329 1044 aa19.17■□□□□ 0.66
NFIC-208ENST00000589537 EPB41L2O43491 1005 aaKnown RBP19.17■□□□□ 0.66
NFIC-208ENST00000589537 RCAN1P53805 252 aa19.17■□□□□ 0.66
NFIC-208ENST00000589537 PSMC6P62333 389 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms