RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 CUL4AQ13619 759 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 SAFBQ15424 915 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHD9-219ENST00000569225 UBE2SQ16763 222 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 XRRA1Q6P2D8 792 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 ARMCX2Q7L311 632 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 DAGLBQ8NCG7 672 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 INTS4Q96HW7 963 aaKnown RBP10.44□□□□□ -0.74
CHD9-219ENST00000569225 FGD4Q96M96 766 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 AIFM3Q96NN9 605 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 TAAR1Q96RJ0 339 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 PXMP2Q9NR77 195 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.44□□□□□ -0.74
CHD9-219ENST00000569225 COL20A1Q9P218 1284 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 PCDHA4Q9UN74 947 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 EIF2AK2P19525 551 aaKnown RBP10.44□□□□□ -0.74
CHD9-219ENST00000569225 CCND2P30279 289 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 BECN1Q14457 450 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 STXBP2Q15833 593 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 MAP3K21Q5TCX8 1036 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 MORC4Q8TE76 937 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 C8orf76Q96K31 380 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 PURBQ96QR8 312 aaKnown RBP10.44□□□□□ -0.74
CHD9-219ENST00000569225 ABHD16BQ9H3Z7 469 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 VTA1Q9NP79 307 aa10.44□□□□□ -0.74
CHD9-219ENST00000569225 ZSWIM8A7E2V4 1837 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 STAM2O75886 525 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 IGHA2P01877 340 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 NR3C2P08235 984 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 EDNRBP24530 442 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 CACNB2Q08289 660 aaPredicted RBP10.43□□□□□ -0.74
CHD9-219ENST00000569225 TNS4Q8IZW8 715 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 BLIDQ8IZY5 108 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 ZNF333Q96JL9 665 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 PDCD2LQ9BRP1 358 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 PHF20Q9BVI0 1012 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 HMX1Q9NP08 348 aaPredicted RBP10.43□□□□□ -0.74
CHD9-219ENST00000569225 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
CHD9-219ENST00000569225 PCDHA6Q9UN73 950 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 PCDHA8Q9Y5H6 950 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 ASTN1O14525 1302 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 RPTORQ8N122 1335 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 BAZ2BQ9UIF8 2168 aaKnown RBP10.43□□□□□ -0.74
CHD9-219ENST00000569225 PLXNB2O15031 1838 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 MGAMO43451 1857 aa10.43□□□□□ -0.74
CHD9-219ENST00000569225 EIF3JO75822 258 aaKnown RBP10.42□□□□□ -0.74
CHD9-219ENST00000569225 SNAI1O95863 264 aaPredicted RBP10.42□□□□□ -0.74
CHD9-219ENST00000569225 PDCP20941 246 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 GJB2P29033 226 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 KRT2P35908 639 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
CHD9-219ENST00000569225 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 PGM5Q15124 567 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 JAKMIP3Q5VZ66 844 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 ANO3Q9BYT9 981 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 KCNJ14Q9UNX9 436 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 MSCO60682 206 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 DTNBO60941 627 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 MMP1P03956 469 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 MYCLP12524 364 aaPredicted RBP10.42□□□□□ -0.74
CHD9-219ENST00000569225 CYBAP13498 195 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 CNGA1P29973 690 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 TRIM32Q13049 653 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 GNPTABQ3T906 1256 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 PCNX4Q63HM2 1172 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 KRT40Q6A162 431 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 KRT25Q7Z3Z0 450 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 VSIG10LQ86VR7 867 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 FBXO18Q8NFZ0 1043 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 TMEM106CQ9BVX2 250 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 TMEM260Q9NX78 707 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 FAM184BQ9ULE4 1060 aa10.42□□□□□ -0.74
CHD9-219ENST00000569225 CCDC194A0A1B0GVG4 234 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 H3BQV1 296 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 CCL5P13501 91 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 AKR1A1P14550 325 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 CAPN2P17655 700 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 SREBF1P36956 1147 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 FOSBP53539 338 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 GNL2Q13823 731 aaKnown RBP10.41□□□□□ -0.74
CHD9-219ENST00000569225 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 SCFD2Q8WU76 684 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 SHISA4Q96DD7 197 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD9-219ENST00000569225 RNF208Q9H0X6 261 aa10.41□□□□□ -0.74
CHD9-219ENST00000569225 SEPT4O43236 478 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 MYCP01106 439 aaPredicted RBP10.4□□□□□ -0.74
CHD9-219ENST00000569225 ZNF865P0CJ78 1059 aaPredicted RBP10.4□□□□□ -0.74
CHD9-219ENST00000569225 NONOQ15233 471 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHD9-219ENST00000569225 PRAMEF19Q5SWL8 479 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 IQSEC1Q6DN90 963 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 KCNV1Q6PIU1 500 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 EEPD1Q7L9B9 569 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 NLRX1Q86UT6 975 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 FBXO16Q8IX29 292 aaPredicted RBP10.4□□□□□ -0.74
CHD9-219ENST00000569225 DIS3L2Q8IYB7 885 aaKnown RBP10.4□□□□□ -0.74
CHD9-219ENST00000569225 ABHD8Q96I13 439 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 CDHR1Q96JP9 859 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 UNC93B1Q9H1C4 597 aa10.4□□□□□ -0.74
CHD9-219ENST00000569225 GJB4Q9NTQ9 266 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms