RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
GGA2-210ENST00000567339 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
GGA2-210ENST00000567339 ORC3Q9UBD5 711 aaPredicted RBP11.33□□□□□ -0.6
GGA2-210ENST00000567339 MEIS2O14770 477 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 SEPT4O43236 478 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 SNAI1O95863 264 aaPredicted RBP11.32□□□□□ -0.6
GGA2-210ENST00000567339 GJB1P08034 283 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 CCL5P13501 91 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 AKR1A1P14550 325 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
GGA2-210ENST00000567339 PDE4DQ08499 809 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 STXBP2Q15833 593 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 CCDC83Q8IWF9 413 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 REXO1Q8N1G1 1221 aaKnown RBP11.32□□□□□ -0.6
GGA2-210ENST00000567339 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 SNX21Q969T3 373 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 TMX3Q96JJ7 454 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.32□□□□□ -0.6
GGA2-210ENST00000567339 ZNFX1Q9P2E3 1918 aaKnown RBP11.32□□□□□ -0.6
GGA2-210ENST00000567339 ASTN1O14525 1302 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 PLXNA1Q9UIW2 1896 aa11.32□□□□□ -0.6
GGA2-210ENST00000567339 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 EIF3JO75822 258 aaKnown RBP11.31□□□□□ -0.6
GGA2-210ENST00000567339 CCND2P30279 289 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
GGA2-210ENST00000567339 NLRP5P59047 1200 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 ACVR2BQ13705 512 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 TRIM29Q14134 588 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 TBC1D5Q92609 795 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 TAAR1Q96RJ0 339 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 PDCD2LQ9BRP1 358 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 ALG1Q9BT22 464 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 UNC93B1Q9H1C4 597 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 VPS54Q9P1Q0 977 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 DDX20Q9UHI6 824 aaKnown RBP11.31□□□□□ -0.6
GGA2-210ENST00000567339 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
GGA2-210ENST00000567339 NKRFO15226 690 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGA2-210ENST00000567339 NR3C2P08235 984 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 ZNF865P0CJ78 1059 aaPredicted RBP11.3□□□□□ -0.6
GGA2-210ENST00000567339 RARBP10826 455 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 EIF2AK2P19525 551 aaKnown RBP11.3□□□□□ -0.6
GGA2-210ENST00000567339 GJA8P48165 433 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 ST3GAL1Q11201 340 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 TRIM32Q13049 653 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 PGM5Q15124 567 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 PCNX4Q63HM2 1172 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 KCNV1Q6PIU1 500 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 SCFD2Q8WU76 684 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 KATNBL1Q9H079 304 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 ZHX1Q9UKY1 873 aaPredicted RBP11.3□□□□□ -0.6
GGA2-210ENST00000567339 PCDHA4Q9UN74 947 aa11.3□□□□□ -0.6
GGA2-210ENST00000567339 RBM47A0AV96 593 aaKnown RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 TGFB3P10600 412 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 CNGA1P29973 690 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 SREBF1P36956 1147 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 MTFR1Q15390 333 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 UBE2SQ16763 222 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 IQSEC1Q6DN90 963 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 BLIDQ8IZY5 108 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 INTS4Q96HW7 963 aaKnown RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 SPC25Q9HBM1 224 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 PCDHA6Q9UN73 950 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 Q9Y3F1 56 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 PCDHA8Q9Y5H6 950 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
GGA2-210ENST00000567339 LCTP09848 1927 aa11.29□□□□□ -0.6
GGA2-210ENST00000567339 CENPFP49454 3210 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 MAFGO15525 162 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 JAK2O60674 1132 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 DUSP11O75319 330 aaKnown RBP11.28□□□□□ -0.6
GGA2-210ENST00000567339 SGPL1O95470 568 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 CUL4AQ13619 759 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 SAFBQ15424 915 aaKnown RBP eCLIP11.28□□□□□ -0.6
GGA2-210ENST00000567339 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 NLRX1Q86UT6 975 aa11.28□□□□□ -0.6
GGA2-210ENST00000567339 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms