RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ASTN1O14525 1302 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 PLXNA1Q9UIW2 1896 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 ZNFX1Q9P2E3 1918 aaKnown RBP19.17■□□□□ 0.66
RNF40-206ENST00000564260 SGPL1O95470 568 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 ZNF865P0CJ78 1059 aaPredicted RBP19.17■□□□□ 0.66
RNF40-206ENST00000564260 ADCY7P51828 1080 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 HMGN5P82970 282 aaKnown RBP19.17■□□□□ 0.66
RNF40-206ENST00000564260 PDE4DQ08499 809 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 MTFR1Q15390 333 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 STXBP2Q15833 593 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 ARHGEF16Q5VV41 709 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 LARP6Q9BRS8 491 aaKnown RBP19.17■□□□□ 0.66
RNF40-206ENST00000564260 CRISPLD2Q9H0B8 497 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 DDX20Q9UHI6 824 aaKnown RBP19.17■□□□□ 0.66
RNF40-206ENST00000564260 FAM184BQ9ULE4 1060 aa19.17■□□□□ 0.66
RNF40-206ENST00000564260 hCG_1642624A0A1W2PR95 340 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 SMCO2A6NFE2 343 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 SPDYE3A6NKU9 549 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 EIF3JO75822 258 aaKnown RBP19.16■□□□□ 0.66
RNF40-206ENST00000564260 TRIM32Q13049 653 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 TBC1D5Q92609 795 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 GPKOWQ92917 476 aaPredicted RBP eCLIP19.16■□□□□ 0.66
RNF40-206ENST00000564260 PDCD2LQ9BRP1 358 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 KATNBL1Q9H079 304 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 COL20A1Q9P218 1284 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 Q9Y3F1 56 aa19.16■□□□□ 0.66
RNF40-206ENST00000564260 BAZ2BQ9UIF8 2168 aaKnown RBP19.15■□□□□ 0.66
RNF40-206ENST00000564260 RBM47A0AV96 593 aaKnown RBP19.15■□□□□ 0.66
RNF40-206ENST00000564260 CCDC85CA6NKD9 419 aa19.15■□□□□ 0.66
RNF40-206ENST00000564260 IQSEC1Q6DN90 963 aa19.15■□□□□ 0.66
RNF40-206ENST00000564260 KCNV1Q6PIU1 500 aa19.15■□□□□ 0.66
RNF40-206ENST00000564260 NSUN7Q8NE18 718 aaKnown RBP19.15■□□□□ 0.66
RNF40-206ENST00000564260 U2AF1L4Q8WU68 220 aaKnown RBP19.15■□□□□ 0.66
RNF40-206ENST00000564260 TAAR1Q96RJ0 339 aa19.15■□□□□ 0.66
RNF40-206ENST00000564260 OGDHLQ9ULD0 1010 aa19.15■□□□□ 0.66
RNF40-206ENST00000564260 NKRFO15226 690 aaKnown RBP eCLIP19.14■□□□□ 0.65
RNF40-206ENST00000564260 NR3C2P08235 984 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 RARBP10826 455 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 CCND2P30279 289 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 HOXA13P31271 388 aaPredicted RBP19.14■□□□□ 0.65
RNF40-206ENST00000564260 CLK2P49760 499 aaKnown RBP19.14■□□□□ 0.65
RNF40-206ENST00000564260 LHX8Q68G74 356 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 VSIG10LQ86VR7 867 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 DAGLBQ8NCG7 672 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 TRPV1Q8NER1 839 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 SCFD2Q8WU76 684 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 ORC3Q9UBD5 711 aaPredicted RBP19.14■□□□□ 0.65
RNF40-206ENST00000564260 ZHX1Q9UKY1 873 aaPredicted RBP19.14■□□□□ 0.65
RNF40-206ENST00000564260 KIF3AQ9Y496 699 aa19.14■□□□□ 0.65
RNF40-206ENST00000564260 DUSP11O75319 330 aaKnown RBP19.13■□□□□ 0.65
RNF40-206ENST00000564260 LARGE1O95461 756 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 CTDNEP1O95476 244 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 TGFB3P10600 412 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 CCND3P30281 292 aaPredicted RBP19.13■□□□□ 0.65
RNF40-206ENST00000564260 NKX3-2P78367 333 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 PGM5Q15124 567 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 PCNX4Q63HM2 1172 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 USP17L6PQ6QN14 398 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 REXO1Q8N1G1 1221 aaKnown RBP19.13■□□□□ 0.65
RNF40-206ENST00000564260 NECAB1Q8N987 351 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 DEFB118Q96PH6 123 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 SMCHD1A6NHR9 2005 aa19.13■□□□□ 0.65
RNF40-206ENST00000564260 CNGA1P29973 690 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 CCDC144BQ3MJ40 725 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 GNPTABQ3T906 1256 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 NOL8Q76FK4 1167 aaKnown RBP19.12■□□□□ 0.65
RNF40-206ENST00000564260 FCHSD1Q86WN1 690 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 ARRDC4Q8NCT1 418 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 CDHR1Q96JP9 859 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 PURBQ96QR8 312 aaKnown RBP19.12■□□□□ 0.65
RNF40-206ENST00000564260 SPC25Q9HBM1 224 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 LCTP09848 1927 aa19.12■□□□□ 0.65
RNF40-206ENST00000564260 MAFGO15525 162 aa19.11■□□□□ 0.65
RNF40-206ENST00000564260 EIF2AK2P19525 551 aaKnown RBP19.11■□□□□ 0.65
RNF40-206ENST00000564260 TTLL4Q14679 1199 aa19.11■□□□□ 0.65
RNF40-206ENST00000564260 TAPT1Q6NXT6 567 aa19.11■□□□□ 0.65
RNF40-206ENST00000564260 TMX3Q96JJ7 454 aa19.11■□□□□ 0.65
RNF40-206ENST00000564260 PCDHA6Q9UN73 950 aa19.11■□□□□ 0.65
RNF40-206ENST00000564260 PCDHA4Q9UN74 947 aa19.11■□□□□ 0.65
RNF40-206ENST00000564260 PCDHA8Q9Y5H6 950 aa19.11■□□□□ 0.65
RNF40-206ENST00000564260 TFRCP02786 760 aaKnown RBP19.1■□□□□ 0.65
RNF40-206ENST00000564260 CST5P28325 142 aaPredicted RBP19.1■□□□□ 0.65
RNF40-206ENST00000564260 NLRP5P59047 1200 aa19.1■□□□□ 0.65
RNF40-206ENST00000564260 TNFAIP2Q03169 654 aa19.1■□□□□ 0.65
RNF40-206ENST00000564260 DUSP28Q4G0W2 176 aa19.1■□□□□ 0.65
RNF40-206ENST00000564260 PRAMEF19Q5SWL8 479 aa19.1■□□□□ 0.65
RNF40-206ENST00000564260 SNX21Q969T3 373 aa19.1■□□□□ 0.65
RNF40-206ENST00000564260 INPP4AQ96PE3 977 aaPredicted RBP19.1■□□□□ 0.65
RNF40-206ENST00000564260 VPS54Q9P1Q0 977 aa19.1■□□□□ 0.65
RNF40-206ENST00000564260 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.1■□□□□ 0.65
RNF40-206ENST00000564260 LRRC37A2A6NM11 1700 aa19.1■□□□□ 0.65
RNF40-206ENST00000564260 BRCA2P51587 3418 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 DNM1LO00429 736 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 FDPSP14324 419 aaKnown RBP19.09■□□□□ 0.65
RNF40-206ENST00000564260 ICAM3P32942 547 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 SREBF1P36956 1147 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 RGS19P49795 217 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 ST3GAL1Q11201 340 aa19.09■□□□□ 0.65
RNF40-206ENST00000564260 TRIM29Q14134 588 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms