RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 SNHG28P0DPA3 235 aa17.68■□□□□ 0.42
XRCC3-210ENST00000554974 EDNRBP24530 442 aa17.68■□□□□ 0.42
XRCC3-210ENST00000554974 PWP2Q15269 919 aaKnown RBP17.68■□□□□ 0.42
XRCC3-210ENST00000554974 NBPF20Q3BBV1 942 aa17.68■□□□□ 0.42
XRCC3-210ENST00000554974 SCFD2Q8WU76 684 aa17.68■□□□□ 0.42
XRCC3-210ENST00000554974 ZKSCAN3Q9BRR0 538 aa17.68■□□□□ 0.42
XRCC3-210ENST00000554974 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
XRCC3-210ENST00000554974 RAD50Q92878 1312 aa17.68■□□□□ 0.42
XRCC3-210ENST00000554974 PTPRSQ13332 1948 aa17.67■□□□□ 0.42
XRCC3-210ENST00000554974 ARIH2O95376 493 aa17.67■□□□□ 0.42
XRCC3-210ENST00000554974 CA3P07451 260 aa17.67■□□□□ 0.42
XRCC3-210ENST00000554974 PFKMP08237 780 aa17.67■□□□□ 0.42
XRCC3-210ENST00000554974 CHMP4BP1P59074 171 aa17.67■□□□□ 0.42
XRCC3-210ENST00000554974 MFSD6Q6ZSS7 791 aa17.67■□□□□ 0.42
XRCC3-210ENST00000554974 A6NJR5 290 aa17.66■□□□□ 0.42
XRCC3-210ENST00000554974 TXNP10599 105 aaKnown RBP17.66■□□□□ 0.42
XRCC3-210ENST00000554974 MRPS5P82675 430 aaKnown RBP17.66■□□□□ 0.42
XRCC3-210ENST00000554974 LNPKQ9C0E8 428 aa17.66■□□□□ 0.42
XRCC3-210ENST00000554974 CERS4Q9HA82 394 aa17.66■□□□□ 0.42
XRCC3-210ENST00000554974 COL4A4P53420 1690 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-210ENST00000554974 TET1Q8NFU7 2136 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 MYH6P13533 1939 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 KIAA1217Q5T5P2 1943 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 NCOR1O75376 2440 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 TRIM6-TRIM34B2RNG4 842 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 RFXAPO00287 272 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 NKRFO15226 690 aaKnown RBP eCLIP17.65■□□□□ 0.42
XRCC3-210ENST00000554974 BRDTQ58F21 947 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-210ENST00000554974 TMEM67Q5HYA8 995 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 DNERQ8NFT8 737 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 MPHOSPH6Q99547 160 aaKnown RBP17.65■□□□□ 0.42
XRCC3-210ENST00000554974 UBA5Q9GZZ9 404 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
XRCC3-210ENST00000554974 TCF20Q9UGU0 1960 aaKnown RBP17.65■□□□□ 0.42
XRCC3-210ENST00000554974 PRRC2BQ5JSZ5 2229 aaKnown RBP17.64■□□□□ 0.42
XRCC3-210ENST00000554974 EPOPA6NHQ4 379 aa17.64■□□□□ 0.41
XRCC3-210ENST00000554974 RBAK-RBAKDNI3L0D1 243 aa17.64■□□□□ 0.41
XRCC3-210ENST00000554974 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
XRCC3-210ENST00000554974 ARHGEF15O94989 841 aa17.64■□□□□ 0.41
XRCC3-210ENST00000554974 IQCF3P0C7M6 154 aa17.64■□□□□ 0.41
XRCC3-210ENST00000554974 TFF2Q03403 129 aa17.64■□□□□ 0.41
XRCC3-210ENST00000554974 CDC37Q16543 378 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-210ENST00000554974 TTC14Q96N46 770 aa17.64■□□□□ 0.41
XRCC3-210ENST00000554974 NECAB3Q96P71 396 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-210ENST00000554974 UHRF1Q96T88 793 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-210ENST00000554974 TRIP12Q14669 1992 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-210ENST00000554974 PCP11498 1178 aaKnown RBP17.63■□□□□ 0.41
XRCC3-210ENST00000554974 ACTN1P12814 892 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 GPATCH4Q5T3I0 446 aaKnown RBP17.63■□□□□ 0.41
XRCC3-210ENST00000554974 KRT40Q6A162 431 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 AFG1LQ8WV93 481 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 TBC1D5Q92609 795 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 ESR2Q92731 530 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 SLC9A7Q96T83 725 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 FTOQ9C0B1 505 aaKnown RBP eCLIP17.63■□□□□ 0.41
XRCC3-210ENST00000554974 RNF41Q9H4P4 317 aaPredicted RBP17.63■□□□□ 0.41
XRCC3-210ENST00000554974 COL20A1Q9P218 1284 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 RAPGEFL1Q9UHV5 662 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 NOD1Q9Y239 953 aa17.63■□□□□ 0.41
XRCC3-210ENST00000554974 KPNA6O60684 536 aa17.62■□□□□ 0.41
XRCC3-210ENST00000554974 MMP3P08254 477 aa17.62■□□□□ 0.41
XRCC3-210ENST00000554974 RFC2P35250 354 aa17.62■□□□□ 0.41
XRCC3-210ENST00000554974 SKIV2LQ15477 1246 aaKnown RBP17.62■□□□□ 0.41
XRCC3-210ENST00000554974 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
XRCC3-210ENST00000554974 SEPT14Q6ZU15 432 aa17.62■□□□□ 0.41
XRCC3-210ENST00000554974 RETREG2Q8NC44 543 aa17.62■□□□□ 0.41
XRCC3-210ENST00000554974 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
XRCC3-210ENST00000554974 B4DLN1 442 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 KDM4AO75164 1064 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 COL9A1P20849 921 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 MRPL12P52815 198 aaKnown RBP17.61■□□□□ 0.41
XRCC3-210ENST00000554974 NUCB1Q02818 461 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 TAP1Q03518 808 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
XRCC3-210ENST00000554974 ARHGAP1Q07960 439 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 BFSP2Q13515 415 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 PTGISQ16647 500 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 LY6KQ17RY6 165 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 B4GALNT3Q6L9W6 998 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 CHST3Q7LGC8 479 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 SPRED2Q7Z698 418 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 HERC6Q8IVU3 1022 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 SYTL5Q8TDW5 730 aaPredicted RBP17.61■□□□□ 0.41
XRCC3-210ENST00000554974 ARNTL2Q8WYA1 636 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 TAAR1Q96RJ0 339 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 CTAGE1Q96RT6 745 aa17.61■□□□□ 0.41
XRCC3-210ENST00000554974 TSPYL2Q9H2G4 693 aaPredicted RBP17.61■□□□□ 0.41
XRCC3-210ENST00000554974 B4E1Z4 1266 aa17.6■□□□□ 0.41
XRCC3-210ENST00000554974 ZNF213O14771 459 aa17.6■□□□□ 0.41
XRCC3-210ENST00000554974 SDSP20132 328 aa17.6■□□□□ 0.41
XRCC3-210ENST00000554974 KCNQ1P51787 676 aa17.6■□□□□ 0.41
XRCC3-210ENST00000554974 GDF6Q6KF10 455 aaPredicted RBP17.6■□□□□ 0.41
XRCC3-210ENST00000554974 TMCO2Q7Z6W1 182 aaPredicted RBP17.6■□□□□ 0.41
XRCC3-210ENST00000554974 DGKHQ86XP1 1220 aa17.6■□□□□ 0.41
XRCC3-210ENST00000554974 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
XRCC3-210ENST00000554974 ADGRF4Q8IZF3 695 aa17.6■□□□□ 0.41
XRCC3-210ENST00000554974 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms