RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.95□□□□□ -0.34
IFT43-206ENST00000554026 RNF208Q9H0X6 261 aa12.95□□□□□ -0.34
IFT43-206ENST00000554026 VTA1Q9NP79 307 aa12.95□□□□□ -0.34
IFT43-206ENST00000554026 RIC8AQ9NPQ8 531 aa12.95□□□□□ -0.34
IFT43-206ENST00000554026 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
IFT43-206ENST00000554026 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
IFT43-206ENST00000554026 SMCO2A6NFE2 343 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 SPDYE3A6NKU9 549 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 SEPT4O43236 478 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 STAM2O75886 525 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 CYBAP13498 195 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 TAL1P17542 331 aaPredicted RBP12.94□□□□□ -0.34
IFT43-206ENST00000554026 EDNRBP24530 442 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
IFT43-206ENST00000554026 AP3B2Q13367 1082 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 ACVR2BQ13705 512 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 STXBP2Q15833 593 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 PKN1Q16512 942 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
IFT43-206ENST00000554026 FGD4Q96M96 766 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 ZMYND12Q9H0C1 365 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 PAK6Q9NQU5 681 aaPredicted RBP12.94□□□□□ -0.34
IFT43-206ENST00000554026 PXMP2Q9NR77 195 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 FAM184BQ9ULE4 1060 aa12.94□□□□□ -0.34
IFT43-206ENST00000554026 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 MEIS2O14770 477 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 SNAI1O95863 264 aaPredicted RBP12.93□□□□□ -0.34
IFT43-206ENST00000554026 AKR1A1P14550 325 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 CNGA1P29973 690 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 NECAB1Q8N987 351 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 TAAR1Q96RJ0 339 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 UNC93B1Q9H1C4 597 aa12.93□□□□□ -0.34
IFT43-206ENST00000554026 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
IFT43-206ENST00000554026 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
IFT43-206ENST00000554026 CCND2P30279 289 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 HOXA13P31271 388 aaPredicted RBP12.92□□□□□ -0.34
IFT43-206ENST00000554026 GJA8P48165 433 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 NLRP5P59047 1200 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 TRIM29Q14134 588 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 MTFR1Q15390 333 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 FCHSD1Q86WN1 690 aa12.92□□□□□ -0.34
IFT43-206ENST00000554026 REXO1Q8N1G1 1221 aaKnown RBP12.92□□□□□ -0.34
IFT43-206ENST00000554026 NSUN7Q8NE18 718 aaKnown RBP12.92□□□□□ -0.34
IFT43-206ENST00000554026 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
IFT43-206ENST00000554026 ZHX1Q9UKY1 873 aaPredicted RBP12.92□□□□□ -0.34
IFT43-206ENST00000554026 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
IFT43-206ENST00000554026 ASTN1O14525 1302 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 FRMPD4Q14CM0 1322 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 NKRFO15226 690 aaKnown RBP eCLIP12.91□□□□□ -0.34
IFT43-206ENST00000554026 LARGE1O95461 756 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 SGPL1O95470 568 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 NR3C2P08235 984 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 ZNF865P0CJ78 1059 aaPredicted RBP12.91□□□□□ -0.34
IFT43-206ENST00000554026 RARBP10826 455 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
IFT43-206ENST00000554026 TRIM32Q13049 653 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 GNPTABQ3T906 1256 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 CCDC83Q8IWF9 413 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 ARRDC4Q8NCT1 418 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 SCFD2Q8WU76 684 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 DEFB118Q96PH6 123 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
IFT43-206ENST00000554026 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
IFT43-206ENST00000554026 DUSP11O75319 330 aaKnown RBP12.9□□□□□ -0.34
IFT43-206ENST00000554026 CTDNEP1O95476 244 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.34
IFT43-206ENST00000554026 TGFB3P10600 412 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.34
IFT43-206ENST00000554026 PGM5Q15124 567 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 CCDC144BQ3MJ40 725 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 PRAMEF19Q5SWL8 479 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 PCNX4Q63HM2 1172 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 TYW1BQ6NUM6 668 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 FAM184AQ8NB25 1140 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 DAGLBQ8NCG7 672 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
IFT43-206ENST00000554026 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
IFT43-206ENST00000554026 ALG1Q9BT22 464 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 VPS54Q9P1Q0 977 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 PCDHA6Q9UN73 950 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 PCDHA4Q9UN74 947 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 Q9Y3F1 56 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 PCDHA8Q9Y5H6 950 aa12.9□□□□□ -0.34
IFT43-206ENST00000554026 LCTP09848 1927 aa12.9□□□□□ -0.35
IFT43-206ENST00000554026 MAFGO15525 162 aa12.89□□□□□ -0.35
IFT43-206ENST00000554026 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
IFT43-206ENST00000554026 MYCLP12524 364 aaPredicted RBP12.89□□□□□ -0.35
IFT43-206ENST00000554026 CLK2P49760 499 aaKnown RBP12.89□□□□□ -0.35
IFT43-206ENST00000554026 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms