RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 CHST3Q7LGC8 479 aa20.16■□□□□ 0.82
TSPAN4-214ENST00000525201 ZNF654Q8IZM8 581 aa20.16■□□□□ 0.82
TSPAN4-214ENST00000525201 LY9Q9HBG7 655 aa20.16■□□□□ 0.82
TSPAN4-214ENST00000525201 SEC63Q9UGP8 760 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-214ENST00000525201 BEX3Q00994 111 aa20.15■□□□□ 0.82
TSPAN4-214ENST00000525201 SYNE3Q6ZMZ3 975 aa20.15■□□□□ 0.82
TSPAN4-214ENST00000525201 OR6J1Q8NGC5 347 aa20.15■□□□□ 0.82
TSPAN4-214ENST00000525201 RRP36Q96EU6 259 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-214ENST00000525201 SPZ1Q9BXG8 430 aa20.15■□□□□ 0.82
TSPAN4-214ENST00000525201 TAF6LQ9Y6J9 622 aa20.15■□□□□ 0.82
TSPAN4-214ENST00000525201 TRIOBPQ9H2D6 2365 aa20.14■□□□□ 0.82
TSPAN4-214ENST00000525201 SH2B2O14492 632 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-214ENST00000525201 CTAGE5O15320 804 aa20.14■□□□□ 0.81
TSPAN4-214ENST00000525201 TXNP10599 105 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-214ENST00000525201 HSD17B4P51659 736 aa20.14■□□□□ 0.81
TSPAN4-214ENST00000525201 CXCL17Q6UXB2 119 aa20.14■□□□□ 0.81
TSPAN4-214ENST00000525201 BADQ92934 168 aa20.14■□□□□ 0.81
TSPAN4-214ENST00000525201 SLC12A7Q9Y666 1083 aa20.14■□□□□ 0.81
TSPAN4-214ENST00000525201 TRIM43BA6NCK2 446 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 GCOM1H8Y6P7 765 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 HMGB1P09429 215 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 POLR2MP0CAP2 368 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 CDK7P50613 346 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 FPGSQ05932 587 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 FAAP100Q0VG06 881 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 ITGA7Q13683 1181 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 KCNV1Q6PIU1 500 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 TRIM43Q96BQ3 446 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 PIGSQ96S52 555 aa20.13■□□□□ 0.81
TSPAN4-214ENST00000525201 EIF3JO75822 258 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-214ENST00000525201 NEK1Q96PY6 1258 aa20.12■□□□□ 0.81
TSPAN4-214ENST00000525201 TAAR1Q96RJ0 339 aa20.12■□□□□ 0.81
TSPAN4-214ENST00000525201 PXMP2Q9NR77 195 aa20.12■□□□□ 0.81
TSPAN4-214ENST00000525201 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-214ENST00000525201 TIMP1P01033 207 aa20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 EIF2AK2P19525 551 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 SH3RF1Q7Z6J0 888 aa20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 FAM126BQ8IXS8 530 aa20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 SLC43A3Q8NBI5 491 aa20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 CUL5Q93034 780 aa20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 MTG1Q9BT17 334 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 SENP2Q9HC62 589 aa20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 TBX21Q9UL17 535 aa20.11■□□□□ 0.81
TSPAN4-214ENST00000525201 CYTH3O43739 400 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 PPP1R11O60927 126 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 REC8O95072 547 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 GH1P01241 217 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 NR3C2P08235 984 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 SUPT20HL2P0C7V6 817 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 IRX5P78411 483 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 PPIGQ13427 754 aaKnown RBP eCLIP20.1■□□□□ 0.813e-9■■■□□ 16.8
TSPAN4-214ENST00000525201 TSGA10IPQ3SY00 556 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 SGMS1Q86VZ5 419 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 TMEM199Q8N511 208 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 COL20A1Q9P218 1284 aa20.1■□□□□ 0.81
TSPAN4-214ENST00000525201 A6NJR5 290 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 STAM2O75886 525 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 MYL3P08590 195 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 CCND2P30279 289 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 PURAQ00577 322 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 MFSD5Q6N075 450 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 SEPT14Q6ZU15 432 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 TBC1D5Q92609 795 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 RBM28Q9NW13 759 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 MRVI1Q9Y6F6 885 aa20.09■□□□□ 0.81
TSPAN4-214ENST00000525201 OPLAHO14841 1288 aa20.08■□□□□ 0.81
TSPAN4-214ENST00000525201 DHX32Q7L7V1 743 aaKnown RBP20.08■□□□□ 0.81
TSPAN4-214ENST00000525201 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.81
TSPAN4-214ENST00000525201 MYL10Q9BUA6 226 aa20.08■□□□□ 0.81
TSPAN4-214ENST00000525201 SOX1O00570 391 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 CD4P01730 458 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 TGFB3P10600 412 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 FGD1P98174 961 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 PTPN11Q06124 597 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 PGM5Q15124 567 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 GNPTABQ3T906 1256 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 CCDC62Q6P9F0 684 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 TEX2Q8IWB9 1127 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 FANCBQ8NB91 859 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 SMARCC2Q8TAQ2 1214 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 LRCH3Q96II8 777 aa20.07■□□□□ 0.8
TSPAN4-214ENST00000525201 EPB41L2O43491 1005 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 MYCLP12524 364 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 HOXA13P31271 388 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 RCAN1P53805 252 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 LAMC2Q13753 1193 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 NFRKBQ6P4R8 1299 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 PSRC1Q6PGN9 363 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 SKAP1Q86WV1 359 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 MICU3Q86XE3 530 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 EMID1Q96A84 441 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 RNPC3Q96LT9 517 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 KATNAL1Q9BW62 490 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 MTIF3Q9H2K0 278 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 HIPK3Q9H422 1215 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 DNAH12Q6ZR08 3092 aa20.06■□□□□ 0.8
TSPAN4-214ENST00000525201 SHHQ15465 462 aa20.05■□□□□ 0.8
TSPAN4-214ENST00000525201 DGKDQ16760 1214 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms