RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TAB3Q8N5C8 712 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-204ENST00000462658 OR6P1Q8NGX9 317 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 Q96M66 194 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 BRWD3Q6RI45 1802 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 NWD2Q9ULI1 1742 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 LTBP3Q9NS15 1303 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 A0A1W2PQH9 124 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 SMAD7O15105 426 aaKnown RBP9.38□□□□□ -0.91
UBE4B-204ENST00000462658 NKPD1Q17RQ9 610 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 MEX3CQ5U5Q3 659 aaKnown RBP9.38□□□□□ -0.91
UBE4B-204ENST00000462658 MFSD4AQ8N468 514 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 VWCEQ96DN2 955 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 TNKS2Q9H2K2 1166 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 CAPN6Q9Y6Q1 641 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 LMO7Q8WWI1 1683 aa9.38□□□□□ -0.91
UBE4B-204ENST00000462658 COL18A1P39060 1754 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 FAM83GA6ND36 823 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 CLEC3AO75596 197 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 ZNF865P0CJ78 1059 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-204ENST00000462658 CCNFP41002 786 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 CD97P48960 835 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 TNK2Q07912 1038 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 DCTN1Q14203 1278 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 CDKAL1Q5VV42 579 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 INTS5Q6P9B9 1019 aaKnown RBP9.37□□□□□ -0.91
UBE4B-204ENST00000462658 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 RTF1Q92541 710 aaKnown RBP9.37□□□□□ -0.91
UBE4B-204ENST00000462658 THUMPD2Q9BTF0 503 aaKnown RBP9.37□□□□□ -0.91
UBE4B-204ENST00000462658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.37□□□□□ -0.91
UBE4B-204ENST00000462658 MKNK2Q9HBH9 465 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
UBE4B-204ENST00000462658 ABCC6O95255 1503 aa9.36□□□□□ -0.91
UBE4B-204ENST00000462658 RNF123Q5XPI4 1314 aa9.36□□□□□ -0.91
UBE4B-204ENST00000462658 FAM155AB1AL88 458 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-204ENST00000462658 HTATSF1O43719 755 aaKnown RBP9.36□□□□□ -0.91
UBE4B-204ENST00000462658 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-204ENST00000462658 TDRD10Q5VZ19 366 aaKnown RBP9.36□□□□□ -0.91
UBE4B-204ENST00000462658 C22orf34Q6ZV56 151 aa9.36□□□□□ -0.91
UBE4B-204ENST00000462658 TSR2Q969E8 191 aaKnown RBP9.36□□□□□ -0.91
UBE4B-204ENST00000462658 LAS1LQ9Y4W2 734 aaKnown RBP9.36□□□□□ -0.91
UBE4B-204ENST00000462658 COL14A1Q05707 1796 aaKnown RBP9.36□□□□□ -0.91
UBE4B-204ENST00000462658 FANCIQ9NVI1 1328 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 C9IYK1 514 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 KIR3DL1P43629 444 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 EVA1CP58658 441 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 GNAI1P63096 354 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 IFI16Q16666 785 aaKnown RBP9.35□□□□□ -0.91
UBE4B-204ENST00000462658 AMOTQ4VCS5 1084 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 NBPF12Q5TAG4 269 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-204ENST00000462658 ZNF772Q68DY9 489 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-204ENST00000462658 MCM10Q7L590 875 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 PPFIBP1Q86W92 1011 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 DTWD2Q8NBA8 298 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 SUCOQ9UBS9 1254 aaKnown RBP9.35□□□□□ -0.91
UBE4B-204ENST00000462658 PCDHB10Q9UN67 800 aa9.35□□□□□ -0.91
UBE4B-204ENST00000462658 ZNF853P0CG23 659 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 ATP2B1P20020 1258 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 CASP7P55210 303 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 RRP1P56182 461 aaKnown RBP9.34□□□□□ -0.91
UBE4B-204ENST00000462658 IRX6P78412 446 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-204ENST00000462658 TOM1L2Q6ZVM7 507 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 C19orf47Q8N9M1 422 aaKnown RBP9.34□□□□□ -0.91
UBE4B-204ENST00000462658 RAPGEF4Q8WZA2 1011 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 COX4I2Q96KJ9 171 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 FBXL18Q96ME1 805 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 HSPA12BQ96MM6 686 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 ASPNQ9BXN1 380 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 PRKAG3Q9UGI9 489 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 RGPD5Q99666 1765 aa9.34□□□□□ -0.91
UBE4B-204ENST00000462658 WDR17Q8IZU2 1322 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 CAMTA1Q9Y6Y1 1673 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 SCO2A0A1W2PP80 73 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 KIAA1324LA8MWY0 1029 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 H3BS24 57 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 TP53P04637 393 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 SPINK2P20155 84 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 GTF2F1P35269 517 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 CD96P40200 585 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 PMS1P54277 932 aaKnown RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 BNIP3Q12983 259 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 ZNF530Q6P9A1 599 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 DTX1Q86Y01 620 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 HNRNPLLQ8WVV9 542 aaKnown RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 DHRS1Q96LJ7 313 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 MKRN2Q9H000 416 aaKnown RBP9.33□□□□□ -0.92
UBE4B-204ENST00000462658 PCMTD2Q9NV79 361 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 ST14Q9Y5Y6 855 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 MAP3K5Q99683 1374 aa9.33□□□□□ -0.92
UBE4B-204ENST00000462658 WASH4PA8MWX3 477 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 CHL1O00533 1208 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-204ENST00000462658 RNF4P78317 190 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms