RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 SH3TC2Q8TF17 1288 aa12.49□□□□□ -0.41
CCDC12-203ENST00000446836 TBC1D5Q92609 795 aa12.49□□□□□ -0.41
CCDC12-203ENST00000446836 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
CCDC12-203ENST00000446836 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
CCDC12-203ENST00000446836 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
CCDC12-203ENST00000446836 FRMPD4Q14CM0 1322 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 K7ELQ4 463 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-203ENST00000446836 MSCO60682 206 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 STAM2O75886 525 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 FDPSP14324 419 aaKnown RBP12.48□□□□□ -0.41
CCDC12-203ENST00000446836 HOXA13P31271 388 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-203ENST00000446836 CYP2C19P33261 490 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 NLRP5P59047 1200 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 CACNB2Q08289 660 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-203ENST00000446836 PDE4DQ08499 809 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 TRIM29Q14134 588 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 HSCBQ8IWL3 235 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 REXO1Q8N1G1 1221 aaKnown RBP12.48□□□□□ -0.41
CCDC12-203ENST00000446836 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 DAGLBQ8NCG7 672 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 ALG1Q9BT22 464 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 VPS54Q9P1Q0 977 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 HTTP42858 3142 aa12.48□□□□□ -0.41
CCDC12-203ENST00000446836 ASTN1O14525 1302 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 JAK2O60674 1132 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 SNAI1O95863 264 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-203ENST00000446836 CYBAP13498 195 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 CLK2P49760 499 aaKnown RBP12.47□□□□□ -0.41
CCDC12-203ENST00000446836 CUL4AQ13619 759 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 ACVR2BQ13705 512 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 STXBP2Q15833 593 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 USP17L6PQ6QN14 398 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
CCDC12-203ENST00000446836 PDCD2LQ9BRP1 358 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
CCDC12-203ENST00000446836 SEPT4O43236 478 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 EIF3JO75822 258 aaKnown RBP12.46□□□□□ -0.41
CCDC12-203ENST00000446836 NR3C2P08235 984 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 CCL5P13501 91 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 EIF2AK2P19525 551 aaKnown RBP12.46□□□□□ -0.41
CCDC12-203ENST00000446836 CCND2P30279 289 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 PGM5Q15124 567 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 ABHD8Q96I13 439 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
CCDC12-203ENST00000446836 PHF20Q9BVI0 1012 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC12-203ENST00000446836 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.41
CCDC12-203ENST00000446836 PCDHA6Q9UN73 950 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 PCDHA8Q9Y5H6 950 aa12.46□□□□□ -0.41
CCDC12-203ENST00000446836 MCM3APO60318 1980 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 GJB1P08034 283 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 ZNF865P0CJ78 1059 aaPredicted RBP12.45□□□□□ -0.42
CCDC12-203ENST00000446836 AKR1A1P14550 325 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 TRIM32Q13049 653 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 SAFBQ15424 915 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC12-203ENST00000446836 UBE2SQ16763 222 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 GNPTABQ3T906 1256 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 PCNX4Q63HM2 1172 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 IQSEC1Q6DN90 963 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 VSIG10LQ86VR7 867 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 C8orf76Q96K31 380 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 AIFM3Q96NN9 605 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 ANO3Q9BYT9 981 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 RNF208Q9H0X6 261 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 ZHX1Q9UKY1 873 aaPredicted RBP12.45□□□□□ -0.42
CCDC12-203ENST00000446836 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 SMC3Q9UQE7 1217 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
CCDC12-203ENST00000446836 RBM47A0AV96 593 aaKnown RBP12.44□□□□□ -0.42
CCDC12-203ENST00000446836 MMP1P03956 469 aa12.44□□□□□ -0.42
CCDC12-203ENST00000446836 CNGA1P29973 690 aa12.44□□□□□ -0.42
CCDC12-203ENST00000446836 SREBF1P36956 1147 aa12.44□□□□□ -0.42
CCDC12-203ENST00000446836 SCFD2Q8WU76 684 aa12.44□□□□□ -0.42
CCDC12-203ENST00000446836 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
CCDC12-203ENST00000446836 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
CCDC12-203ENST00000446836 DDX20Q9UHI6 824 aaKnown RBP12.44□□□□□ -0.42
CCDC12-203ENST00000446836 NKRFO15226 690 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC12-203ENST00000446836 MAFGO15525 162 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 TGFB3P10600 412 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 RARBP10826 455 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
CCDC12-203ENST00000446836 PDCP20941 246 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 CCND3P30281 292 aaPredicted RBP12.43□□□□□ -0.42
CCDC12-203ENST00000446836 KRT2P35908 639 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 TTLL4Q14679 1199 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 MTFR1Q15390 333 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 NPY5RQ15761 445 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 CCDC144BQ3MJ40 725 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
CCDC12-203ENST00000446836 JAKMIP3Q5VZ66 844 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms