RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 TUBBP07437 444 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 PDHBP11177 359 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 PCK1P35558 622 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 EXOSC10Q01780 885 aaKnown RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 PDCLQ13371 301 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 ACBD5Q5T8D3 534 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 SYCP3Q8IZU3 236 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 TCP11Q8WWU5 503 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 HOOK2Q96ED9 719 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 ZSCAN31Q96LW9 406 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 SEC62Q99442 399 aaKnown RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 PPP1R12CQ9BZL4 782 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 PUS7LQ9H0K6 701 aaKnown RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 DCP1AQ9NPI6 582 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 PPP2R2CQ9Y2T4 447 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 MYPNQ86TC9 1320 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 COL4A6Q14031 1691 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 RASSF10A6NK89 507 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 FAM155AB1AL88 458 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 SNAP23O00161 211 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 MEFVO15553 781 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 HSF2BPO75031 334 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 RPS6KA5O75582 802 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 CDC25CP30307 473 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 IRAK1P51617 712 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 TAX1BP1Q86VP1 789 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 TRIM42Q8IWZ5 723 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 TRIM58Q8NG06 486 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 MTMR8Q96EF0 704 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 TTC14Q96N46 770 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 TSGA10Q9BZW7 698 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 ZCWPW1Q9H0M4 648 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 CCDC8Q9H0W5 538 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 DDX4Q9NQI0 724 aaKnown RBP5.42□□□□□ -1.54
ITGB1-205ENST00000423113 BATF3Q9NR55 127 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 RPS6KL1Q9Y6S9 549 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 FRMPD4Q14CM0 1322 aa5.42□□□□□ -1.54
ITGB1-205ENST00000423113 E7EVH7 732 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 CREB3O43889 395 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 ZMYND10O75800 440 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 PAX3P23760 479 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 GUCY1A2P33402 732 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 C1QTNF8P60827 252 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 C11orf91Q3C1V1 193 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 HIBCHQ6NVY1 386 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 PI16Q6UXB8 463 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 GMCL1P1Q8NEA9 526 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 HELBQ8NG08 1087 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 TRPM4Q8TD43 1214 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 BICD1Q96G01 975 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 CAPZA3Q96KX2 299 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 IQCGQ9H095 443 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 DBNDD1Q9H9R9 158 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 POLD4Q9HCU8 107 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 SLC40A1Q9NP59 571 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 IL1RAPL2Q9NP60 686 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 ZNHIT6Q9NWK9 470 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 MTMR6Q9Y217 621 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 ARHGAP6O43182 974 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 CCDC175P0C221 793 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 HSPD1P10809 573 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 GNAT1P11488 350 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 SHMT1P34896 483 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 MATR3P43243 847 aaKnown RBP eCLIP5.41□□□□□ -1.543e-7■■■■□ 20.5
ITGB1-205ENST00000423113 CUL3Q13618 768 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 STK38Q15208 465 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 TSR1Q2NL82 804 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 SND1Q7KZF4 910 aaKnown RBP eCLIP5.41□□□□□ -1.541e-7■■■□□ 15.5
ITGB1-205ENST00000423113 SGMS1Q86VZ5 419 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 SPATS2Q86XZ4 545 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 DZIP1Q86YF9 867 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 MB21D2Q8IYB1 491 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 EZH1Q92800 747 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 PPANQ9NQ55 473 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 HDAC9Q9UKV0 1011 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 ZNF202O95125 648 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 OATP04181 439 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 EPHX2P34913 555 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 VSNL1P62760 191 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 FANCCQ00597 558 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 NMIQ13287 307 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 MTA1Q13330 715 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 IRF5Q13568 498 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 SEC23AQ15436 765 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 KCTD16Q68DU8 428 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 ZNF589Q86UQ0 364 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 MICALL2Q8IY33 904 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 LCORLQ8N3X6 602 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 WHAMMQ8TF30 809 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 NSMCE1Q8WV22 266 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 LEO1Q8WVC0 666 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 CCDC47Q96A33 483 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 WDR24Q96S15 920 aa5.41□□□□□ -1.54
ITGB1-205ENST00000423113 AATFQ9NY61 560 aaKnown RBP eCLIP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 CNOT7Q9UIV1 285 aaKnown RBP5.41□□□□□ -1.54
ITGB1-205ENST00000423113 TLL2Q9Y6L7 1015 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms