RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 SYN2Q92777 582 aaPredicted RBP10.06□□□□□ -0.8
SMYD3-201ENST00000366516 CCDC43Q96MW1 224 aaKnown RBP10.06□□□□□ -0.8
SMYD3-201ENST00000366516 KLC4Q9NSK0 619 aa10.06□□□□□ -0.8
SMYD3-201ENST00000366516 MAPK8IP1Q9UQF2 711 aa10.06□□□□□ -0.8
SMYD3-201ENST00000366516 SAMM50Q9Y512 469 aa10.06□□□□□ -0.8
SMYD3-201ENST00000366516 CAPN6Q9Y6Q1 641 aa10.06□□□□□ -0.8
SMYD3-201ENST00000366516 GCOM1H8Y6P7 765 aaPredicted RBP10.05□□□□□ -0.8
SMYD3-201ENST00000366516 KLRC4O43908 158 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 PRDM1O75626 825 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 HEXIM1O94992 359 aaKnown RBP10.05□□□□□ -0.8
SMYD3-201ENST00000366516 PLEKHA8P1O95397 391 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 MYZAPP0CAP1 466 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 EZRP15311 586 aaKnown RBP10.05□□□□□ -0.8
SMYD3-201ENST00000366516 CALRP27797 417 aaKnown RBP10.05□□□□□ -0.8
SMYD3-201ENST00000366516 MAGEA1P43355 309 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 GNAQP50148 359 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
SMYD3-201ENST00000366516 MAN2A1Q16706 1144 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 NBPF9Q3BBW0 867 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 VWA3BQ502W6 1294 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 CCDC178Q5BJE1 867 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 CEP85LQ5SZL2 805 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 RNF187Q5TA31 235 aaPredicted RBP10.05□□□□□ -0.8
SMYD3-201ENST00000366516 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 LRRC27Q9C0I9 530 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 SWAP70Q9UH65 585 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 TRMT112Q9UI30 125 aaKnown RBP10.05□□□□□ -0.8
SMYD3-201ENST00000366516 PCDHA4Q9UN74 947 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 TACC3Q9Y6A5 838 aa10.05□□□□□ -0.8
SMYD3-201ENST00000366516 MINDY4BA8MYZ0 360 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ERVV-1B6SEH8 477 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 RBAK-RBAKDNI3L0D1 243 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 PRKAB2O43741 272 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ORC4O43929 436 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 MOCS3O95396 460 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 LRRC63Q05C16 580 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 SNCBQ16143 134 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 SLC9C1Q4G0N8 1177 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 PREPLQ4J6C6 727 aaPredicted RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 TYW1BQ6NUM6 668 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 NFRKBQ6P4R8 1299 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 TSEN2Q8NCE0 465 aaKnown RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 DAGLBQ8NCG7 672 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ARL8AQ96BM9 186 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ZBTB9Q96C00 473 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 SHISA4Q96DD7 197 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 CCT8L2Q96SF2 557 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 DUSP9Q99956 384 aaKnown RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 C7orf25Q9BPX7 421 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 PLCB1Q9NQ66 1216 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 TMOD3Q9NYL9 352 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 COBLO75128 1261 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ERCC3P19447 782 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 CYP7A1P22680 504 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 HSPA9P38646 679 aaKnown RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 MATR3P43243 847 aaKnown RBP eCLIP10.04□□□□□ -0.82e-6■■■□□ 18.4
SMYD3-201ENST00000366516 PMS1P54277 932 aaKnown RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 PDE4DQ08499 809 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 NAALADL2Q58DX5 795 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 CACNA2D4Q7Z3S7 1137 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 CCDC13Q8IYE1 715 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 C4orf32Q8N8J7 132 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ZNF622Q969S3 477 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 RNPC3Q96LT9 517 aaKnown RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 JPH2Q9BR39 696 aaPredicted RBP10.04□□□□□ -0.8
SMYD3-201ENST00000366516 ARHGAP20Q9P2F6 1191 aa10.04□□□□□ -0.8
SMYD3-201ENST00000366516 SPATA31A3Q5VYP0 1347 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 A0A1B0GUA9 196 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 ZNF233A6NK53 670 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 E7EVH7 732 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 RASSF9O75901 435 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 KRT14P02533 472 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
SMYD3-201ENST00000366516 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 ASIC1P78348 528 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 SLC7A5Q01650 507 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 ITGB3BPQ13352 177 aaPredicted RBP10.03□□□□□ -0.8
SMYD3-201ENST00000366516 IL17AQ16552 155 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 C10orf76Q5T2E6 689 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 WLSQ5T9L3 541 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 MAATS1Q7Z4T9 603 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 HDAC7Q8WUI4 952 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 TAF4BQ92750 862 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 CALR3Q96L12 384 aaKnown RBP10.03□□□□□ -0.8
SMYD3-201ENST00000366516 CCDC114Q96M63 670 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 TSG101Q99816 390 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 TRIM9Q9C026 710 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 NDST4Q9H3R1 872 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 TAF1DQ9H5J8 278 aaPredicted RBP10.03□□□□□ -0.8
SMYD3-201ENST00000366516 CNOT10Q9H9A5 744 aaKnown RBP10.03□□□□□ -0.8
SMYD3-201ENST00000366516 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 EPB41L5Q9HCM4 733 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 RBM12Q9NTZ6 932 aaKnown RBP10.03□□□□□ -0.8
SMYD3-201ENST00000366516 DUSP10Q9Y6W6 482 aa10.03□□□□□ -0.8
SMYD3-201ENST00000366516 ATP8B3O60423 1300 aa10.02□□□□□ -0.8
SMYD3-201ENST00000366516 PVALEFA0A1B0GWK0 134 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms