RNA–Protein interactions for RNA: tF(GAA)N

tF(GAA)N, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)N, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)NtF(GAA)N YJL181WP46987 611 aa4.51□□□□□ -1.69
tF(GAA)NtF(GAA)N LYS4P49367 693 aaPredicted RBP4.51□□□□□ -1.69
tF(GAA)NtF(GAA)N PRP5P21372 849 aaPredicted RBP4.5□□□□□ -1.69
tF(GAA)NtF(GAA)N RCM1P53972 490 aa4.5□□□□□ -1.69
tF(GAA)NtF(GAA)N DOT5P40553 215 aa4.49□□□□□ -1.69
tF(GAA)NtF(GAA)N SSA2P10592 639 aaKnown RBP4.48□□□□□ -1.69
tF(GAA)NtF(GAA)N NAP1P25293 417 aaKnown RBP4.48□□□□□ -1.69
tF(GAA)NtF(GAA)N IES2P40154 320 aa4.48□□□□□ -1.69
tF(GAA)NtF(GAA)N TAF8Q03750 510 aa4.48□□□□□ -1.69
tF(GAA)NtF(GAA)N GCN2P15442 1659 aa4.48□□□□□ -1.69
tF(GAA)NtF(GAA)N IKI3Q06706 1349 aaKnown RBP4.47□□□□□ -1.69
tF(GAA)NtF(GAA)N NPR2P39923 615 aa4.47□□□□□ -1.69
tF(GAA)NtF(GAA)N ALD2P47771 506 aa4.47□□□□□ -1.69
tF(GAA)NtF(GAA)N MSB3P48566 633 aaPredicted RBP4.47□□□□□ -1.69
tF(GAA)NtF(GAA)N BFR2Q06631 534 aaKnown RBP4.47□□□□□ -1.69
tF(GAA)NtF(GAA)N RAV1P47104 1357 aa4.46□□□□□ -1.7
tF(GAA)NtF(GAA)N CPS1P27614 576 aa4.46□□□□□ -1.7
tF(GAA)NtF(GAA)N FOX2Q02207 900 aaKnown RBP4.46□□□□□ -1.7
tF(GAA)NtF(GAA)N PSK1P31374 1356 aa4.45□□□□□ -1.7
tF(GAA)NtF(GAA)N PPH3P32345 308 aa4.45□□□□□ -1.7
tF(GAA)NtF(GAA)N PRP40P33203 583 aaKnown RBP4.45□□□□□ -1.7
tF(GAA)NtF(GAA)N NOP7P53261 605 aaKnown RBP4.45□□□□□ -1.7
tF(GAA)NtF(GAA)N LAM6Q08001 693 aa4.45□□□□□ -1.7
tF(GAA)NtF(GAA)N ENP1P38333 483 aaKnown RBP4.44□□□□□ -1.7
tF(GAA)NtF(GAA)N TCB1Q12466 1186 aa4.44□□□□□ -1.7
tF(GAA)NtF(GAA)N RTC1Q08281 1341 aa4.44□□□□□ -1.7
tF(GAA)NtF(GAA)N COBP00163 385 aa4.43□□□□□ -1.7
tF(GAA)NtF(GAA)N NUP192P47054 1683 aa4.42□□□□□ -1.7
tF(GAA)NtF(GAA)N YKL133CP36066 463 aa4.42□□□□□ -1.7
tF(GAA)NtF(GAA)N RPG1P38249 964 aaKnown RBP4.42□□□□□ -1.7
tF(GAA)NtF(GAA)N GTT3P39996 337 aa4.42□□□□□ -1.7
tF(GAA)NtF(GAA)N CTH1P47976 325 aa4.42□□□□□ -1.7
tF(GAA)NtF(GAA)N RRP5Q05022 1729 aaKnown RBP4.42□□□□□ -1.7
tF(GAA)NtF(GAA)N CSE4P36012 229 aa4.41□□□□□ -1.7
tF(GAA)NtF(GAA)N YRF1-2P40105 1681 aa4.41□□□□□ -1.7
tF(GAA)NtF(GAA)N YRF1-4O13559 1382 aa4.4□□□□□ -1.71
tF(GAA)NtF(GAA)N ROM2P51862 1356 aaKnown RBP4.4□□□□□ -1.71
tF(GAA)NtF(GAA)N RPS24AP0CX31 135 aaKnown RBP4.39□□□□□ -1.71
tF(GAA)NtF(GAA)N RPS24BP0CX32 135 aaKnown RBP4.39□□□□□ -1.71
tF(GAA)NtF(GAA)N XKS1P42826 600 aa4.39□□□□□ -1.71
tF(GAA)NtF(GAA)N SLM3Q12093 417 aa4.39□□□□□ -1.71
tF(GAA)NtF(GAA)N YEF3P16521 1044 aaKnown RBP4.38□□□□□ -1.71
tF(GAA)NtF(GAA)N ESL2P36168 1195 aa4.38□□□□□ -1.71
tF(GAA)NtF(GAA)N EAF6P47128 113 aa4.38□□□□□ -1.71
tF(GAA)NtF(GAA)N RSF2P46974 1380 aa4.38□□□□□ -1.71
tF(GAA)NtF(GAA)N YKR075CP36155 307 aa4.37□□□□□ -1.71
tF(GAA)NtF(GAA)N ORC1P54784 914 aaPredicted RBP4.37□□□□□ -1.71
tF(GAA)NtF(GAA)N ALD3P54114 506 aa4.36□□□□□ -1.71
tF(GAA)NtF(GAA)N FRK1Q03002 865 aaPredicted RBP4.36□□□□□ -1.71
tF(GAA)NtF(GAA)N SQS1P53866 767 aaKnown RBP4.35□□□□□ -1.71
tF(GAA)NtF(GAA)N URB1P34241 1764 aaKnown RBP4.35□□□□□ -1.71
tF(GAA)NtF(GAA)N LEU2P04173 364 aaPredicted RBP4.34□□□□□ -1.71
tF(GAA)NtF(GAA)N SPE2P21182 396 aa4.34□□□□□ -1.71
tF(GAA)NtF(GAA)N KIP3P53086 805 aaKnown RBP4.34□□□□□ -1.71
tF(GAA)NtF(GAA)N HPC2Q01448 625 aa4.34□□□□□ -1.71
tF(GAA)NtF(GAA)N EDE1P34216 1381 aa4.34□□□□□ -1.71
tF(GAA)NtF(GAA)N ADE6P38972 1358 aaKnown RBP4.34□□□□□ -1.71
tF(GAA)NtF(GAA)N BDF1P35817 686 aa4.33□□□□□ -1.72
tF(GAA)NtF(GAA)N CHZ1P40019 153 aaPredicted RBP4.33□□□□□ -1.72
tF(GAA)NtF(GAA)N SAP155P43612 1002 aa4.33□□□□□ -1.72
tF(GAA)NtF(GAA)N MSN5P52918 1224 aa4.33□□□□□ -1.72
tF(GAA)NtF(GAA)N GAS4Q08271 471 aa4.33□□□□□ -1.72
tF(GAA)NtF(GAA)N SPT7P35177 1332 aa4.32□□□□□ -1.72
tF(GAA)NtF(GAA)N MTR4P47047 1073 aaKnown RBP4.32□□□□□ -1.72
tF(GAA)NtF(GAA)N MSB4Q12317 492 aa4.32□□□□□ -1.72
tF(GAA)NtF(GAA)N TY4B-HP0C2J7 1802 aa4.32□□□□□ -1.72
tF(GAA)NtF(GAA)N TY4B-JP47024 1803 aa4.32□□□□□ -1.72
tF(GAA)NtF(GAA)N DPS1P04802 557 aaKnown RBP4.31□□□□□ -1.72
tF(GAA)NtF(GAA)N YER156CP40093 338 aaKnown RBP4.31□□□□□ -1.72
tF(GAA)NtF(GAA)N ADE16P54113 591 aaKnown RBP4.31□□□□□ -1.72
tF(GAA)NtF(GAA)N BUG1Q12191 341 aa4.31□□□□□ -1.72
tF(GAA)NtF(GAA)N SSA4P22202 642 aaKnown RBP4.3□□□□□ -1.72
tF(GAA)NtF(GAA)N MEC3Q02574 474 aa4.3□□□□□ -1.72
tF(GAA)NtF(GAA)N ATG13Q06628 738 aa4.3□□□□□ -1.72
tF(GAA)NtF(GAA)N RCR1P38212 213 aa4.29□□□□□ -1.72
tF(GAA)NtF(GAA)N CWH41P53008 833 aa4.29□□□□□ -1.72
tF(GAA)NtF(GAA)N FKS3Q04952 1785 aa4.29□□□□□ -1.72
tF(GAA)NtF(GAA)N TOP1P04786 769 aa4.28□□□□□ -1.72
tF(GAA)NtF(GAA)N PEX21P50091 288 aa4.28□□□□□ -1.72
tF(GAA)NtF(GAA)N PRP43P53131 767 aaKnown RBP4.28□□□□□ -1.72
tF(GAA)NtF(GAA)N RIX7Q07844 837 aaKnown RBP4.28□□□□□ -1.72
tF(GAA)NtF(GAA)N CTI6Q08923 506 aa4.28□□□□□ -1.72
tF(GAA)NtF(GAA)N GRE2Q12068 342 aaKnown RBP4.28□□□□□ -1.72
tF(GAA)NtF(GAA)N CTT1P06115 562 aa4.27□□□□□ -1.73
tF(GAA)NtF(GAA)N SLI15P38283 698 aa4.27□□□□□ -1.73
tF(GAA)NtF(GAA)N RRT14P40470 206 aa4.27□□□□□ -1.73
tF(GAA)NtF(GAA)N TOS1P38288 455 aa4.26□□□□□ -1.73
tF(GAA)NtF(GAA)N KIN4Q01919 800 aa4.26□□□□□ -1.73
tF(GAA)NtF(GAA)N RPO41P13433 1351 aaKnown RBP4.26□□□□□ -1.73
tF(GAA)NtF(GAA)N YLR419WQ06698 1435 aaKnown RBP4.24□□□□□ -1.73
tF(GAA)NtF(GAA)N YKL222CP35995 705 aa4.24□□□□□ -1.73
tF(GAA)NtF(GAA)N RTF1P53064 558 aa4.24□□□□□ -1.73
tF(GAA)NtF(GAA)N UTP22P53254 1237 aaPredicted RBP4.24□□□□□ -1.73
tF(GAA)NtF(GAA)N PUS5Q06244 254 aa4.24□□□□□ -1.73
tF(GAA)NtF(GAA)N THS1P04801 734 aaKnown RBP4.23□□□□□ -1.73
tF(GAA)NtF(GAA)N RAD4P14736 754 aa4.23□□□□□ -1.73
tF(GAA)NtF(GAA)N OSM1P21375 501 aaKnown RBP4.23□□□□□ -1.73
tF(GAA)NtF(GAA)N GRX1P25373 110 aaKnown RBP4.23□□□□□ -1.73
tF(GAA)NtF(GAA)N BUD27P43573 796 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
tF(GAA)NtF(GAA)N YBP2P53169 641 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms