RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W BNR1P40450 1375 aa7.84□□□□□ -1.16
RPN7YPR108W NAP1P25293 417 aaKnown RBP7.83□□□□□ -1.16
RPN7YPR108W PDR10P51533 1564 aa7.83□□□□□ -1.16
RPN7YPR108W IQG1Q12280 1495 aa7.82□□□□□ -1.16
RPN7YPR108W TRP5P00931 707 aaKnown RBP7.82□□□□□ -1.16
RPN7YPR108W MSB4Q12317 492 aa7.82□□□□□ -1.16
RPN7YPR108W GDB1Q06625 1536 aa7.8□□□□□ -1.16
RPN7YPR108W EAP1P36041 632 aaKnown RBP7.8□□□□□ -1.16
RPN7YPR108W DRS2P39524 1355 aa7.8□□□□□ -1.16
RPN7YPR108W TRM3Q07527 1436 aa7.78□□□□□ -1.16
RPN7YPR108W ENP1P38333 483 aaKnown RBP7.78□□□□□ -1.16
RPN7YPR108W PSD2P53037 1138 aaKnown RBP7.78□□□□□ -1.16
RPN7YPR108W GCN2P15442 1659 aa7.78□□□□□ -1.16
RPN7YPR108W YBT1P32386 1661 aa7.78□□□□□ -1.16
RPN7YPR108W TY3B-GQ99315 1547 aa7.78□□□□□ -1.16
RPN7YPR108W ARO1P08566 1588 aaKnown RBP7.77□□□□□ -1.17
RPN7YPR108W ESL2P36168 1195 aa7.77□□□□□ -1.17
RPN7YPR108W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
RPN7YPR108W SET4P42948 560 aa7.76□□□□□ -1.17
RPN7YPR108W YNL035CP53962 389 aaKnown RBP7.76□□□□□ -1.17
RPN7YPR108W SEC61P32915 480 aa7.75□□□□□ -1.17
RPN7YPR108W YOL036WQ08206 761 aa7.74□□□□□ -1.17
RPN7YPR108W YSP2Q06681 1438 aa7.74□□□□□ -1.17
RPN7YPR108W SPO14P36126 1683 aa7.73□□□□□ -1.17
RPN7YPR108W SAP30P38429 201 aa7.71□□□□□ -1.18
RPN7YPR108W SEC7P11075 2009 aaKnown RBP7.71□□□□□ -1.18
RPN7YPR108W CST9Q06032 482 aa7.7□□□□□ -1.18
RPN7YPR108W RGA1P39083 1007 aa7.69□□□□□ -1.18
RPN7YPR108W RTC1Q08281 1341 aa7.69□□□□□ -1.18
RPN7YPR108W MRM1P25270 412 aa7.68□□□□□ -1.18
RPN7YPR108W CHL1P22516 861 aaPredicted RBP7.67□□□□□ -1.18
RPN7YPR108W MHP1P43638 1398 aa7.67□□□□□ -1.18
RPN7YPR108W YRF1-1P0CX20 1796 aa7.66□□□□□ -1.18
RPN7YPR108W YRF1-5P0CX21 1796 aa7.66□□□□□ -1.18
RPN7YPR108W YRF1-8P0CX22 1796 aa7.66□□□□□ -1.18
RPN7YPR108W DMA1P38823 416 aa7.66□□□□□ -1.18
RPN7YPR108W RAV1P47104 1357 aa7.66□□□□□ -1.18
RPN7YPR108W MGA2P40578 1113 aa7.65□□□□□ -1.18
RPN7YPR108W PDR5P33302 1511 aaKnown RBP7.64□□□□□ -1.19
RPN7YPR108W YAP3P38749 330 aa7.63□□□□□ -1.19
RPN7YPR108W IPL1P38991 367 aa7.62□□□□□ -1.19
RPN7YPR108W DOP1Q03921 1698 aa7.61□□□□□ -1.19
RPN7YPR108W TAF5P38129 798 aa7.6□□□□□ -1.19
RPN7YPR108W PRE3P38624 215 aa7.6□□□□□ -1.19
RPN7YPR108W TFG1P41895 735 aaPredicted RBP7.6□□□□□ -1.19
RPN7YPR108W KIP3P53086 805 aaKnown RBP7.59□□□□□ -1.19
RPN7YPR108W MRX12P47084 519 aa7.58□□□□□ -1.2
RPN7YPR108W PDS5Q04264 1277 aa7.58□□□□□ -1.2
RPN7YPR108W ITT1Q04638 464 aa7.57□□□□□ -1.2
RPN7YPR108W XDJ1P39102 459 aa7.56□□□□□ -1.2
RPN7YPR108W NOP2P40991 618 aaKnown RBP7.56□□□□□ -1.2
RPN7YPR108W ORC1P54784 914 aaPredicted RBP7.56□□□□□ -1.2
RPN7YPR108W SPT7P35177 1332 aa7.54□□□□□ -1.2
RPN7YPR108W YOR093CQ12275 1648 aa7.54□□□□□ -1.2
RPN7YPR108W DNF2Q12675 1612 aa7.54□□□□□ -1.2
RPN7YPR108W DPS1P04802 557 aaKnown RBP7.54□□□□□ -1.2
RPN7YPR108W SPE2P21182 396 aa7.54□□□□□ -1.2
RPN7YPR108W ALD4P46367 519 aaKnown RBP7.54□□□□□ -1.2
RPN7YPR108W DAN4P47179 1161 aa7.54□□□□□ -1.2
RPN7YPR108W CHC1P22137 1653 aaKnown RBP7.54□□□□□ -1.2
RPN7YPR108W VRP1P37370 817 aa7.53□□□□□ -1.2
RPN7YPR108W YDL129WQ07555 291 aa7.53□□□□□ -1.2
RPN7YPR108W IML1P47170 1584 aa7.52□□□□□ -1.21
RPN7YPR108W CFT1Q06632 1357 aaKnown RBP7.52□□□□□ -1.21
RPN7YPR108W NUP188P52593 1655 aaKnown RBP7.51□□□□□ -1.21
RPN7YPR108W TY3B-IQ7LHG5 1498 aaKnown RBP7.51□□□□□ -1.21
RPN7YPR108W RPP0P05317 312 aaKnown RBP7.51□□□□□ -1.21
RPN7YPR108W RCR1P38212 213 aa7.51□□□□□ -1.21
RPN7YPR108W CHZ1P40019 153 aaPredicted RBP7.51□□□□□ -1.21
RPN7YPR108W IOC4Q04213 475 aa7.51□□□□□ -1.21
RPN7YPR108W FPR3P38911 411 aaKnown RBP7.5□□□□□ -1.21
RPN7YPR108W YRB30P53107 440 aaPredicted RBP7.5□□□□□ -1.21
RPN7YPR108W HAP1P0CE41 1502 aa7.5□□□□□ -1.21
RPN7YPR108W VMR1P38735 1592 aa7.5□□□□□ -1.21
RPN7YPR108W RTG3P38165 486 aa7.49□□□□□ -1.21
RPN7YPR108W VPS29P38759 282 aa7.49□□□□□ -1.21
RPN7YPR108W SRC1Q03707 834 aa7.49□□□□□ -1.21
RPN7YPR108W TAF8Q03750 510 aa7.49□□□□□ -1.21
RPN7YPR108W RTF1P53064 558 aa7.46□□□□□ -1.22
RPN7YPR108W YDR344CQ05510 147 aa7.46□□□□□ -1.22
RPN7YPR108W ABP1P15891 592 aaKnown RBP7.45□□□□□ -1.22
RPN7YPR108W TYS1P36421 394 aaKnown RBP7.45□□□□□ -1.22
RPN7YPR108W YLR419WQ06698 1435 aaKnown RBP7.44□□□□□ -1.22
RPN7YPR108W LEU3P08638 886 aa7.44□□□□□ -1.22
RPN7YPR108W YFR006WP43590 535 aa7.44□□□□□ -1.22
RPN7YPR108W CDC45Q08032 650 aa7.44□□□□□ -1.22
RPN7YPR108W YMR1P47147 688 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
RPN7YPR108W VMA1P17255 1071 aaKnown RBP7.42□□□□□ -1.22
RPN7YPR108W DBP1P24784 617 aaKnown RBP7.42□□□□□ -1.22
RPN7YPR108W STS1P38637 319 aa7.42□□□□□ -1.22
RPN7YPR108W VPS27P40343 622 aaKnown RBP7.42□□□□□ -1.22
RPN7YPR108W YFR016CP43597 1233 aaKnown RBP7.42□□□□□ -1.22
RPN7YPR108W MAK10Q02197 733 aa7.42□□□□□ -1.22
RPN7YPR108W YMR196WQ04336 1088 aa7.42□□□□□ -1.22
RPN7YPR108W CAB1Q04430 367 aa7.42□□□□□ -1.22
RPN7YPR108W PDI1P17967 522 aaKnown RBP7.41□□□□□ -1.22
RPN7YPR108W GRX4P32642 244 aa7.41□□□□□ -1.22
RPN7YPR108W LEU2P04173 364 aaPredicted RBP7.4□□□□□ -1.22
RPN7YPR108W JIP4Q03361 876 aa7.4□□□□□ -1.22
RPN7YPR108W SAM3Q08986 587 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 188.8 ms