RNA–Protein interactions for RNA: YPR023C

EAF3, Transcript of Component of the Rpd3S histone deacetylase complex, yeast

Gene EAF3, Length 1,206 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EAF3	YPR023C	PDS5	Q04264	1277 aa		11.99	□□□□□ -0.49
EAF3	YPR023C	PPH3	P32345	308 aa		11.98	□□□□□ -0.49
EAF3	YPR023C	CPS1	P27614	576 aa		11.95	□□□□□ -0.5
EAF3	YPR023C	SPT7	P35177	1332 aa		11.94	□□□□□ -0.5
EAF3	YPR023C	PSK1	P31374	1356 aa		11.93	□□□□□ -0.5
EAF3	YPR023C	SEC3	P33332	1336 aa	Known RBP	11.93	□□□□□ -0.5
EAF3	YPR023C	RTG3	P38165	486 aa		11.93	□□□□□ -0.5
EAF3	YPR023C	FKH1	P40466	484 aa		11.92	□□□□□ -0.5
EAF3	YPR023C	PSD2	P53037	1138 aa	Known RBP	11.92	□□□□□ -0.5
EAF3	YPR023C	YML133C	Q03099	1374 aa		11.9	□□□□□ -0.5
EAF3	YPR023C	YLL067C	Q07888	1374 aa		11.9	□□□□□ -0.5
EAF3	YPR023C	YLL066C	Q99208	1374 aa		11.9	□□□□□ -0.5
EAF3	YPR023C	LEU3	P08638	886 aa		11.87	□□□□□ -0.51
EAF3	YPR023C	NST1	P53935	1240 aa		11.87	□□□□□ -0.51
EAF3	YPR023C	LEU2	P04173	364 aa	Predicted RBP	11.84	□□□□□ -0.51
EAF3	YPR023C	MLP1	Q02455	1875 aa	Known RBP	11.8	□□□□□ -0.52
EAF3	YPR023C	MTR4	P47047	1073 aa	Known RBP	11.8	□□□□□ -0.52
EAF3	YPR023C	ADE6	P38972	1358 aa	Known RBP	11.79	□□□□□ -0.52
EAF3	YPR023C	PTP3	P40048	928 aa		11.78	□□□□□ -0.52
EAF3	YPR023C	CSE4	P36012	229 aa		11.77	□□□□□ -0.53
EAF3	YPR023C	RPS24A	P0CX31	135 aa	Known RBP	11.76	□□□□□ -0.53
EAF3	YPR023C	RPS24B	P0CX32	135 aa	Known RBP	11.76	□□□□□ -0.53
EAF3	YPR023C	ENP1	P38333	483 aa	Known RBP	11.76	□□□□□ -0.53
EAF3	YPR023C	YEF3	P16521	1044 aa	Known RBP	11.75	□□□□□ -0.53
EAF3	YPR023C	PRP43	P53131	767 aa	Known RBP	11.75	□□□□□ -0.53
EAF3	YPR023C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.74	□□□□□ -0.53	not detected
EAF3	YPR023C	TRK1	P12685	1235 aa		11.73	□□□□□ -0.53
EAF3	YPR023C	PDI1	P17967	522 aa	Known RBP	11.72	□□□□□ -0.53
EAF3	YPR023C	RTF1	P53064	558 aa		11.7	□□□□□ -0.54
EAF3	YPR023C	TAP42	Q04372	366 aa		11.7	□□□□□ -0.54
EAF3	YPR023C	HIM1	Q06674	414 aa		11.7	□□□□□ -0.54
EAF3	YPR023C	TY4B-H	P0C2J7	1802 aa		11.7	□□□□□ -0.54
EAF3	YPR023C	TY4B-J	P47024	1803 aa		11.7	□□□□□ -0.54
EAF3	YPR023C	PRP45	P28004	379 aa	Predicted RBP	11.69	□□□□□ -0.54
EAF3	YPR023C	AUS1	Q08409	1394 aa		11.68	□□□□□ -0.54
EAF3	YPR023C	PRP5	P21372	849 aa	Predicted RBP	11.68	□□□□□ -0.54
EAF3	YPR023C	GAS4	Q08271	471 aa		11.67	□□□□□ -0.54
EAF3	YPR023C	KAR2	P16474	682 aa	Known RBP	11.66	□□□□□ -0.54
EAF3	YPR023C	DPS1	P04802	557 aa	Known RBP	11.65	□□□□□ -0.54
EAF3	YPR023C	GRX4	P32642	244 aa		11.65	□□□□□ -0.54
EAF3	YPR023C	REB1	P21538	810 aa		11.63	□□□□□ -0.55
EAF3	YPR023C	MSB3	P48566	633 aa	Predicted RBP	11.63	□□□□□ -0.55
EAF3	YPR023C	RRP5	Q05022	1729 aa	Known RBP	11.63	□□□□□ -0.55
EAF3	YPR023C	APP1	P53933	587 aa		11.62	□□□□□ -0.55
EAF3	YPR023C	ENT1	Q12518	454 aa		11.62	□□□□□ -0.55
EAF3	YPR023C	PAP2	P53632	584 aa	Known RBP	11.6	□□□□□ -0.55
EAF3	YPR023C	SLM3	Q12093	417 aa		11.6	□□□□□ -0.55
EAF3	YPR023C	YAH1	Q12184	172 aa	Known RBP	11.6	□□□□□ -0.55
EAF3	YPR023C	RRP46	P53256	223 aa	Predicted RBP	11.59	□□□□□ -0.55
EAF3	YPR023C	YRF1-2	P40105	1681 aa		11.58	□□□□□ -0.56
EAF3	YPR023C	IOC4	Q04213	475 aa		11.57	□□□□□ -0.56
EAF3	YPR023C	ENV9	Q08651	330 aa		11.56	□□□□□ -0.56
EAF3	YPR023C	YIL177C	P40434	1758 aa		11.56	□□□□□ -0.56
EAF3	YPR023C	YJL225C	P40889	1758 aa		11.56	□□□□□ -0.56
EAF3	YPR023C	RPO41	P13433	1351 aa	Known RBP	11.55	□□□□□ -0.56
EAF3	YPR023C	TCB1	Q12466	1186 aa		11.55	□□□□□ -0.56
EAF3	YPR023C	PRS1	P32895	427 aa	Known RBP	11.54	□□□□□ -0.56
EAF3	YPR023C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.54	□□□□□ -0.56	not detected
EAF3	YPR023C	RTR1	P40084	226 aa	Predicted RBP	11.53	□□□□□ -0.56
EAF3	YPR023C	YDL144C	Q07589	356 aa		11.53	□□□□□ -0.56
EAF3	YPR023C	XKS1	P42826	600 aa		11.52	□□□□□ -0.57
EAF3	YPR023C	SNF2	P22082	1703 aa		11.52	□□□□□ -0.57
EAF3	YPR023C	MPP10	P47083	593 aa	Known RBP	11.51	□□□□□ -0.57
EAF3	YPR023C	RSF2	P46974	1380 aa		11.49	□□□□□ -0.57
EAF3	YPR023C	AKL1	P38080	1108 aa	Known RBP	11.48	□□□□□ -0.57
EAF3	YPR023C	URB1	P34241	1764 aa	Known RBP	11.48	□□□□□ -0.57
EAF3	YPR023C	RPP0	P05317	312 aa	Known RBP	11.47	□□□□□ -0.57
EAF3	YPR023C	PRD1	P25375	712 aa		11.47	□□□□□ -0.57
EAF3	YPR023C	IES2	P40154	320 aa		11.47	□□□□□ -0.57
EAF3	YPR023C	DSD1	P53095	428 aa		11.47	□□□□□ -0.57
EAF3	YPR023C	IMH1	Q06704	911 aa	Known RBP	11.47	□□□□□ -0.57
EAF3	YPR023C	FKS3	Q04952	1785 aa		11.46	□□□□□ -0.57
EAF3	YPR023C	RCR1	P38212	213 aa		11.45	□□□□□ -0.58
EAF3	YPR023C	VPS27	P40343	622 aa	Known RBP	11.45	□□□□□ -0.58
EAF3	YPR023C	THI22	Q06490	572 aa		11.45	□□□□□ -0.58
EAF3	YPR023C	YRF1-4	O13559	1382 aa		11.44	□□□□□ -0.58
EAF3	YPR023C	APC1	P53886	1748 aa		11.44	□□□□□ -0.58
EAF3	YPR023C	CDC45	Q08032	650 aa		11.43	□□□□□ -0.58
EAF3	YPR023C	SUI2	P20459	304 aa	Known RBP	11.42	□□□□□ -0.58
EAF3	YPR023C	HSP104	P31539	908 aa	Known RBP	11.42	□□□□□ -0.58
EAF3	YPR023C	YIL055C	P40523	627 aa	Known RBP	11.42	□□□□□ -0.58
EAF3	YPR023C	PRY3	P47033	881 aa		11.42	□□□□□ -0.58
EAF3	YPR023C	SIR4	P11978	1358 aa		11.41	□□□□□ -0.58
EAF3	YPR023C	SAP155	P43612	1002 aa		11.41	□□□□□ -0.58
EAF3	YPR023C	RVB2	Q12464	471 aa	Known RBP	11.41	□□□□□ -0.58
EAF3	YPR023C	TPD3	P31383	635 aa		11.39	□□□□□ -0.59
EAF3	YPR023C	NTH2	P35172	780 aa		11.39	□□□□□ -0.59
EAF3	YPR023C	RTT109	Q07794	436 aa		11.39	□□□□□ -0.59
EAF3	YPR023C	YKL133C	P36066	463 aa		11.38	□□□□□ -0.59
EAF3	YPR023C	HEF3	P53978	1044 aa	Known RBP	11.37	□□□□□ -0.59
EAF3	YPR023C	AOS1	Q06624	347 aa		11.37	□□□□□ -0.59
EAF3	YPR023C	YNL050C	P53952	270 aa		11.36	□□□□□ -0.59
EAF3	YPR023C	CTF4	Q01454	927 aa		11.36	□□□□□ -0.59
EAF3	YPR023C	INP54	Q08227	384 aa	Known RBP	11.36	□□□□□ -0.59
EAF3	YPR023C	YRF1-3	P0CX14	1859 aa		11.36	□□□□□ -0.59
EAF3	YPR023C	YRF1-7	P0CX15	1859 aa		11.36	□□□□□ -0.59
EAF3	YPR023C	YRF1-6	P53819	1859 aa		11.36	□□□□□ -0.59
EAF3	YPR023C	DOT5	P40553	215 aa		11.35	□□□□□ -0.59
EAF3	YPR023C	ADE16	P54113	591 aa	Known RBP	11.35	□□□□□ -0.59
EAF3	YPR023C	MEC3	Q02574	474 aa		11.35	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms